Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Olfr316-201ENSMUST00000203731 1011 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
Shmt1P50431 Olfr320-201ENSMUST00000204718 928 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
Shmt1P50431 Hba-x-201ENSMUST00000020531 801 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Shmt1P50431 E230032D23Rik-202ENSMUST00000207959 451 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Shmt1P50431 Gm5086-203ENSMUST00000210897 1136 ntTSL 5 BASIC8.14□□□□□ -1.11
Shmt1P50431 Gm18871-201ENSMUST00000218655 745 ntBASIC8.14□□□□□ -1.11
Shmt1P50431 4930466K18Rik-201ENSMUST00000219458 906 ntBASIC8.14□□□□□ -1.11
Shmt1P50431 7420701I03Rik-201ENSMUST00000222157 737 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Shmt1P50431 AC134414.1-201ENSMUST00000228499 1221 ntBASIC8.14□□□□□ -1.11
Shmt1P50431 Ppbp-201ENSMUST00000031319 1083 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Shmt1P50431 Olfr1447-201ENSMUST00000071484 1113 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
Shmt1P50431 Gm10123-201ENSMUST00000075723 490 ntBASIC8.14□□□□□ -1.11
Shmt1P50431 Olfr1446-201ENSMUST00000081236 1044 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
Shmt1P50431 Krba1-204ENSMUST00000114572 4323 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Shmt1P50431 Gimap4-202ENSMUST00000090070 1804 ntAPPRIS P3 TSL 2 BASIC8.14□□□□□ -1.11
Shmt1P50431 Aqp9-203ENSMUST00000113570 1712 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
Shmt1P50431 Myt1-203ENSMUST00000108757 5115 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
Shmt1P50431 Col25a1-202ENSMUST00000106353 6701 ntAPPRIS ALT2 TSL 5 BASIC8.14□□□□□ -1.11
Shmt1P50431 Pan2-206ENSMUST00000219721 4316 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
Shmt1P50431 Adgrg7-201ENSMUST00000023437 2698 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Shmt1P50431 Gm45512-201ENSMUST00000210432 1553 ntBASIC8.14□□□□□ -1.11
Shmt1P50431 Prdm14-201ENSMUST00000047577 2564 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Shmt1P50431 Olfr140-203ENSMUST00000216475 3574 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
Shmt1P50431 0610037L13Rik-212ENSMUST00000135454 2997 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Shmt1P50431 4833407H14Rik-201ENSMUST00000180442 1485 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Shmt1P50431 Gm29555-201ENSMUST00000188620 1497 ntTSL 5 BASIC8.13□□□□□ -1.11
Shmt1P50431 Siglec1-201ENSMUST00000028794 6387 ntAPPRIS P2 TSL 1 (best) BASIC8.13□□□□□ -1.11
Shmt1P50431 Mrpl17-202ENSMUST00000124482 7300 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Shmt1P50431 Gm12695-201ENSMUST00000107071 1904 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
Shmt1P50431 Slc12a3-205ENSMUST00000212134 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
Shmt1P50431 Gm16506-201ENSMUST00000165553 1405 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
Shmt1P50431 Ccl20-201ENSMUST00000027351 1417 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Shmt1P50431 Olfr523-205ENSMUST00000215785 4165 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
Shmt1P50431 Gm26831-201ENSMUST00000181458 1380 ntBASIC8.13□□□□□ -1.11
Shmt1P50431 Folh1-201ENSMUST00000001824 3125 ntAPPRIS P3 TSL 1 (best) BASIC8.13□□□□□ -1.11
Shmt1P50431 Fmo4-202ENSMUST00000111525 2683 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
Shmt1P50431 Mef2c-222ENSMUST00000199019 4441 ntTSL 5 BASIC8.13□□□□□ -1.11
Shmt1P50431 4930562C15Rik-201ENSMUST00000100211 3829 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
Shmt1P50431 Smgc-203ENSMUST00000109276 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
Shmt1P50431 Gm13229-201ENSMUST00000118238 340 ntBASIC8.13□□□□□ -1.11
Shmt1P50431 Gm15047-201ENSMUST00000118891 454 ntBASIC8.13□□□□□ -1.11
Shmt1P50431 Gm12955-201ENSMUST00000119689 957 ntBASIC8.13□□□□□ -1.11
Shmt1P50431 Gm13163-201ENSMUST00000119875 336 ntBASIC8.13□□□□□ -1.11
Shmt1P50431 Tvp23bos-201ENSMUST00000148598 1011 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Shmt1P50431 Gm23392-201ENSMUST00000157580 113 ntBASIC8.13□□□□□ -1.11
Shmt1P50431 Gm7418-201ENSMUST00000162120 801 ntBASIC8.13□□□□□ -1.11
Shmt1P50431 Gm28821-201ENSMUST00000185637 610 ntTSL 3 BASIC8.13□□□□□ -1.11
Shmt1P50431 1700028B04Rik-201ENSMUST00000186274 555 ntBASIC8.13□□□□□ -1.11
Shmt1P50431 Gm43590-201ENSMUST00000195987 387 ntBASIC8.13□□□□□ -1.11
Shmt1P50431 C920008G01Rik-201ENSMUST00000196756 380 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
Shmt1P50431 Cnn3-203ENSMUST00000197135 1242 ntTSL 5 BASIC8.13□□□□□ -1.11
Shmt1P50431 Olfr1294-201ENSMUST00000208334 942 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
Shmt1P50431 Olfr1233-203ENSMUST00000215469 1205 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
Shmt1P50431 Gm18972-201ENSMUST00000218873 630 ntBASIC8.13□□□□□ -1.11
Shmt1P50431 AC159635.1-201ENSMUST00000220905 2102 ntBASIC8.13□□□□□ -1.11
Shmt1P50431 4930477G07Rik-202ENSMUST00000223195 947 ntTSL 5 BASIC8.13□□□□□ -1.11
Shmt1P50431 AC165154.2-201ENSMUST00000227310 336 ntBASIC8.13□□□□□ -1.11
Shmt1P50431 Mphosph6-201ENSMUST00000034303 1068 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Shmt1P50431 Olfr1377-201ENSMUST00000075177 1063 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
Shmt1P50431 Olfr1231-201ENSMUST00000099786 942 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
Shmt1P50431 Mx1-201ENSMUST00000023655 3385 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
Shmt1P50431 Deptor-201ENSMUST00000023056 3300 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
Shmt1P50431 Abcb11-204ENSMUST00000180142 4963 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
Shmt1P50431 Slc8a1-202ENSMUST00000163123 2877 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Shmt1P50431 Amot-201ENSMUST00000112835 6519 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
Shmt1P50431 Gm5402-201ENSMUST00000119588 1618 ntBASIC8.13□□□□□ -1.11
Shmt1P50431 Patl2-201ENSMUST00000028665 2434 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Shmt1P50431 Hipk1-202ENSMUST00000106845 3967 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Shmt1P50431 Gm26734-201ENSMUST00000181769 1594 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Shmt1P50431 Serpinb1a-201ENSMUST00000076352 1918 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Shmt1P50431 Olfr1254-202ENSMUST00000111523 2650 ntAPPRIS P1 TSL 3 BASIC8.13□□□□□ -1.11
Shmt1P50431 Musk-202ENSMUST00000084578 3347 ntAPPRIS P2 TSL 5 BASIC8.13□□□□□ -1.11
Shmt1P50431 Zfp317-201ENSMUST00000079042 1824 ntAPPRIS P1 TSL 2 BASIC8.13□□□□□ -1.11
Shmt1P50431 Tctex1d1-202ENSMUST00000116317 1772 ntAPPRIS P3 TSL 5 BASIC8.12□□□□□ -1.11
Shmt1P50431 Gm42907-201ENSMUST00000199793 2148 ntBASIC8.12□□□□□ -1.11
Shmt1P50431 Gm43196-201ENSMUST00000201762 2114 ntBASIC8.12□□□□□ -1.11
Shmt1P50431 Xpnpep2-201ENSMUST00000077775 3498 ntAPPRIS P3 TSL 1 (best) BASIC8.12□□□□□ -1.11
Shmt1P50431 Ccdc141-202ENSMUST00000049544 8969 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Shmt1P50431 3110099E03Rik-203ENSMUST00000143695 1353 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Shmt1P50431 Gm44104-201ENSMUST00000204736 3777 ntBASIC8.12□□□□□ -1.11
Shmt1P50431 A530058O07Rik-201ENSMUST00000222059 3364 ntBASIC8.12□□□□□ -1.11
Shmt1P50431 Zfp641-202ENSMUST00000169721 3673 ntAPPRIS P2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Shmt1P50431 Exd1-203ENSMUST00000171024 5290 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Shmt1P50431 Gm15114-201ENSMUST00000112788 1974 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Shmt1P50431 Ston1-201ENSMUST00000064035 3287 ntAPPRIS P1 TSL 2 BASIC8.12□□□□□ -1.11
Shmt1P50431 Psma2-201ENSMUST00000170836 2911 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Shmt1P50431 n-R5s9-201ENSMUST00000104432 117 ntBASIC8.12□□□□□ -1.11
Shmt1P50431 Gimap6-203ENSMUST00000126422 425 ntTSL 3 BASIC8.12□□□□□ -1.11
Shmt1P50431 Gm28053-201ENSMUST00000127537 350 ntAPPRIS P1 TSL 3 BASIC8.12□□□□□ -1.11
Shmt1P50431 Gm8093-203ENSMUST00000144982 1020 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Shmt1P50431 Gm16758-201ENSMUST00000149552 3848 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Shmt1P50431 1700027A07Rik-201ENSMUST00000150472 458 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Shmt1P50431 Gm22948-201ENSMUST00000158561 243 ntBASIC8.12□□□□□ -1.11
Shmt1P50431 4930426I24Rik-201ENSMUST00000180709 601 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Shmt1P50431 Mir7058-201ENSMUST00000184637 75 ntBASIC8.12□□□□□ -1.11
Shmt1P50431 Gm28119-201ENSMUST00000185538 298 ntTSL 5 BASIC8.12□□□□□ -1.11
Shmt1P50431 Gm29230-201ENSMUST00000189687 412 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Shmt1P50431 1700027F09Rik-201ENSMUST00000189767 767 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Shmt1P50431 Ccl2-201ENSMUST00000000193 813 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Shmt1P50431 Cacnb2-216ENSMUST00000195841 503 ntTSL 3 BASIC8.12□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 74.1 ms