Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Vmn1r70-203ENSMUST00000226255 4868 ntAPPRIS P2 BASIC8.96□□□□□ -0.98
Traf1P39428 Gm6493-201ENSMUST00000159889 1786 ntBASIC8.96□□□□□ -0.98
Traf1P39428 Kcnk10-202ENSMUST00000221240 7460 ntAPPRIS P2 TSL 1 (best) BASIC8.96□□□□□ -0.98
Traf1P39428 Zfp488-201ENSMUST00000166737 4301 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Traf1P39428 Gm7534-201ENSMUST00000097849 2338 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Traf1P39428 Olfr544-201ENSMUST00000051201 3270 ntAPPRIS P1 TSL 2 BASIC8.95□□□□□ -0.98
Traf1P39428 Birc2-204ENSMUST00000190341 3331 ntAPPRIS P1 TSL 5 BASIC8.95□□□□□ -0.98
Traf1P39428 Usp15-201ENSMUST00000020334 4666 ntAPPRIS ALT1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Traf1P39428 Gm10862-201ENSMUST00000193956 3350 ntBASIC8.95□□□□□ -0.98
Traf1P39428 Ifit3b-201ENSMUST00000076249 2000 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Traf1P39428 AC126806.1-201ENSMUST00000217349 3869 ntTSL 5 BASIC8.95□□□□□ -0.98
Traf1P39428 Trpc4-201ENSMUST00000029311 3473 ntAPPRIS P3 TSL 1 (best) BASIC8.95□□□□□ -0.98
Traf1P39428 Gpbp1l1-202ENSMUST00000106475 2642 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Traf1P39428 Cflar-205ENSMUST00000114313 6572 ntAPPRIS P2 TSL 1 (best) BASIC8.95□□□□□ -0.98
Traf1P39428 Gm5118-201ENSMUST00000184692 2203 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Traf1P39428 Eif4a2-202ENSMUST00000077605 2708 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Traf1P39428 Il5ra-203ENSMUST00000205004 2271 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Traf1P39428 Igsf1-203ENSMUST00000114891 1761 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Traf1P39428 n-R5s9-201ENSMUST00000104432 117 ntBASIC8.95□□□□□ -0.98
Traf1P39428 1700092K14Rik-201ENSMUST00000106604 395 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Traf1P39428 Smgc-203ENSMUST00000109276 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC8.95□□□□□ -0.98
Traf1P39428 Gm28053-201ENSMUST00000127537 350 ntAPPRIS P1 TSL 3 BASIC8.95□□□□□ -0.98
Traf1P39428 Tsc22d1-205ENSMUST00000133224 786 ntTSL 2 BASIC8.95□□□□□ -0.98
Traf1P39428 Gm16188-201ENSMUST00000142019 420 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Traf1P39428 Gm22687-201ENSMUST00000158301 105 ntBASIC8.95□□□□□ -0.98
Traf1P39428 Mir6340-201ENSMUST00000183857 119 ntBASIC8.95□□□□□ -0.98
Traf1P39428 Gm28869-201ENSMUST00000187199 811 ntTSL 3 BASIC8.95□□□□□ -0.98
Traf1P39428 Gm28573-201ENSMUST00000187821 380 ntBASIC8.95□□□□□ -0.98
Traf1P39428 Gm28980-201ENSMUST00000187877 219 ntBASIC8.95□□□□□ -0.98
Traf1P39428 Plet1-202ENSMUST00000188047 739 ntAPPRIS ALT2 TSL 1 (best) BASIC8.95□□□□□ -0.98
Traf1P39428 1700020D05Rik-201ENSMUST00000189704 1021 ntAPPRIS P1 BASIC8.95□□□□□ -0.98
Traf1P39428 Gm28145-201ENSMUST00000189742 380 ntBASIC8.95□□□□□ -0.98
Traf1P39428 Gm28400-201ENSMUST00000191332 380 ntBASIC8.95□□□□□ -0.98
Traf1P39428 Gm20690-202ENSMUST00000195126 355 ntBASIC8.95□□□□□ -0.98
Traf1P39428 Gm3103-201ENSMUST00000198073 752 ntBASIC8.95□□□□□ -0.98
Traf1P39428 Gm44129-201ENSMUST00000203511 675 ntTSL 3 BASIC8.95□□□□□ -0.98
Traf1P39428 Gm5314-201ENSMUST00000204852 466 ntBASIC8.95□□□□□ -0.98
Traf1P39428 Gm44561-201ENSMUST00000208869 264 ntBASIC8.95□□□□□ -0.98
Traf1P39428 Gm8077-201ENSMUST00000209221 1024 ntBASIC8.95□□□□□ -0.98
Traf1P39428 AC160338.3-201ENSMUST00000214836 384 ntBASIC8.95□□□□□ -0.98
Traf1P39428 CT010472.1-201ENSMUST00000224000 704 ntBASIC8.95□□□□□ -0.98
Traf1P39428 Spink10-201ENSMUST00000055725 1113 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Traf1P39428 Defb34-201ENSMUST00000064475 246 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Traf1P39428 Osbpl3-204ENSMUST00000114468 6494 ntAPPRIS P3 TSL 1 (best) BASIC8.95□□□□□ -0.98
Traf1P39428 Gm19325-201ENSMUST00000186238 3382 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Traf1P39428 4933431K23Rik-204ENSMUST00000209273 2857 ntTSL 5 BASIC8.95□□□□□ -0.98
Traf1P39428 2500004C02Rik-202ENSMUST00000128026 1898 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Traf1P39428 Itgb6-203ENSMUST00000112517 3537 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Traf1P39428 Zfp939-202ENSMUST00000186855 2480 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Traf1P39428 Gm5087-201ENSMUST00000060526 1921 ntTSL 2 BASIC8.95□□□□□ -0.98
Traf1P39428 Gm11282-201ENSMUST00000119018 1416 ntBASIC8.95□□□□□ -0.98
Traf1P39428 Olfr1199-203ENSMUST00000131038 2557 ntAPPRIS P1 TSL 2 BASIC8.95□□□□□ -0.98
Traf1P39428 Gm4951-201ENSMUST00000031549 2645 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Traf1P39428 Igsf1-201ENSMUST00000033442 4421 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Traf1P39428 Lilra5-201ENSMUST00000117550 2109 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Traf1P39428 E430024I08Rik-202ENSMUST00000220632 1513 ntTSL 5 BASIC8.95□□□□□ -0.98
Traf1P39428 Ccr4-201ENSMUST00000054414 2805 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Traf1P39428 AC124421.1-201ENSMUST00000219114 4154 ntBASIC8.94□□□□□ -0.98
Traf1P39428 Naip2-202ENSMUST00000117913 4823 ntAPPRIS P2 TSL 1 (best) BASIC8.94□□□□□ -0.98
Traf1P39428 9030624J02Rik-201ENSMUST00000033280 2934 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Traf1P39428 Gm38697-201ENSMUST00000198061 1746 ntBASIC8.94□□□□□ -0.98
Traf1P39428 Eya3-203ENSMUST00000081726 5160 ntAPPRIS P4 TSL 1 (best) BASIC8.94□□□□□ -0.98
Traf1P39428 Gm38147-201ENSMUST00000192397 1798 ntBASIC8.94□□□□□ -0.98
Traf1P39428 Zfp68-202ENSMUST00000085852 3318 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Traf1P39428 Gm10706-201ENSMUST00000128327 1960 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Traf1P39428 Igkv4-80-201ENSMUST00000103341 348 ntAPPRIS P1 BASIC8.94□□□□□ -0.98
Traf1P39428 Igkv8-27-201ENSMUST00000103381 300 ntAPPRIS P1 BASIC8.94□□□□□ -0.98
Traf1P39428 Gm24284-201ENSMUST00000104240 142 ntBASIC8.94□□□□□ -0.98
Traf1P39428 Gm11496-201ENSMUST00000128078 581 ntTSL 2 BASIC8.94□□□□□ -0.98
Traf1P39428 Gm15915-201ENSMUST00000147379 908 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Traf1P39428 Gm16143-201ENSMUST00000155982 538 ntTSL 5 BASIC8.94□□□□□ -0.98
Traf1P39428 Gm12484-201ENSMUST00000156311 581 ntTSL 5 BASIC8.94□□□□□ -0.98
Traf1P39428 Cd180-202ENSMUST00000167144 430 ntTSL 2 BASIC8.94□□□□□ -0.98
Traf1P39428 Vmn2r-ps60-201ENSMUST00000173296 897 ntBASIC8.94□□□□□ -0.98
Traf1P39428 Gm5181-201ENSMUST00000183140 971 ntBASIC8.94□□□□□ -0.98
Traf1P39428 Gm27238-201ENSMUST00000185180 417 ntTSL 3 BASIC8.94□□□□□ -0.98
Traf1P39428 Gm21181-201ENSMUST00000186249 330 ntBASIC8.94□□□□□ -0.98
Traf1P39428 Gm37592-201ENSMUST00000192741 373 ntTSL 5 BASIC8.94□□□□□ -0.98
Traf1P39428 Gm42584-201ENSMUST00000201404 220 ntBASIC8.94□□□□□ -0.98
Traf1P39428 Gm43812-202ENSMUST00000202701 581 ntBASIC8.94□□□□□ -0.98
Traf1P39428 Gm29918-202ENSMUST00000206036 258 ntTSL 5 BASIC8.94□□□□□ -0.98
Traf1P39428 Zfp474-202ENSMUST00000209270 2113 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Traf1P39428 Gm7789-201ENSMUST00000210473 701 ntTSL 3 BASIC8.94□□□□□ -0.98
Traf1P39428 RMST_1.1-203ENSMUST00000217866 775 ntTSL 3 BASIC8.94□□□□□ -0.98
Traf1P39428 AC238940.2-201ENSMUST00000224202 330 ntBASIC8.94□□□□□ -0.98
Traf1P39428 Gng2-201ENSMUST00000055100 572 ntAPPRIS P1 TSL 3 BASIC8.94□□□□□ -0.98
Traf1P39428 Gm10778-202ENSMUST00000189672 4735 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Traf1P39428 Gm44950-201ENSMUST00000206403 2296 ntBASIC8.94□□□□□ -0.98
Traf1P39428 Slitrk2-202ENSMUST00000166241 7769 ntAPPRIS P1 TSL 2 BASIC8.94□□□□□ -0.98
Traf1P39428 Rasef-202ENSMUST00000102837 5158 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Traf1P39428 Lipf-201ENSMUST00000025680 1411 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Traf1P39428 Epha4-201ENSMUST00000027451 6328 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Traf1P39428 Gabrb3-202ENSMUST00000085240 5712 ntTSL 5 BASIC8.94□□□□□ -0.98
Traf1P39428 Fto-202ENSMUST00000125471 3887 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Traf1P39428 Lars2-201ENSMUST00000038863 3894 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Traf1P39428 Zfp592-201ENSMUST00000107353 7297 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Traf1P39428 Zmynd11-205ENSMUST00000110636 4117 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Traf1P39428 Tcp10a-204ENSMUST00000138222 1838 ntAPPRIS ALT2 TSL 5 BASIC8.94□□□□□ -0.98
Traf1P39428 Kyat3-202ENSMUST00000106218 1888 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Traf1P39428 Vma21-203ENSMUST00000114577 4652 ntTSL 3 BASIC8.93□□□□□ -0.98
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms