Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Adgrg6-201ENSMUST00000041168 6507 ntAPPRIS P2 TSL 1 (best) BASIC6.76□□□□□ -1.33
P20040 Unc13b-215ENSMUST00000207569 14754 ntTSL 5 BASIC6.76□□□□□ -1.33
P20040 Gm36757-201ENSMUST00000221818 3556 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
P20040 Golph3l-202ENSMUST00000098861 2221 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
P20040 Vmn1r197-202ENSMUST00000226225 5326 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
P20040 Lrrcc1-206ENSMUST00000169079 5638 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
P20040 Slc1a3-201ENSMUST00000005493 4163 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
P20040 Slc26a2-201ENSMUST00000037603 2802 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
P20040 Arhgap17-201ENSMUST00000098060 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
P20040 Gm37372-201ENSMUST00000193577 3311 ntBASIC6.76□□□□□ -1.33
P20040 Gm24472-201ENSMUST00000104484 132 ntBASIC6.76□□□□□ -1.33
P20040 Ccdc163-203ENSMUST00000106463 1159 ntAPPRIS P2 TSL 5 BASIC6.76□□□□□ -1.33
P20040 Smim23-202ENSMUST00000109365 331 ntTSL 5 BASIC6.76□□□□□ -1.33
P20040 Pilrb1-201ENSMUST00000110978 1020 ntAPPRIS P2 TSL 1 (best) BASIC6.76□□□□□ -1.33
P20040 Paqr5-202ENSMUST00000113990 1073 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
P20040 Kxd1-203ENSMUST00000118850 992 ntTSL 2 BASIC6.76□□□□□ -1.33
P20040 Gm9392-201ENSMUST00000119337 554 ntBASIC6.76□□□□□ -1.33
P20040 Gm13252-201ENSMUST00000119355 321 ntBASIC6.76□□□□□ -1.33
P20040 Gm12124-201ENSMUST00000120504 679 ntBASIC6.76□□□□□ -1.33
P20040 Milr1-203ENSMUST00000147326 1234 ntAPPRIS P3 TSL 5 BASIC6.76□□□□□ -1.33
P20040 C330019F10Rik-201ENSMUST00000149428 459 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
P20040 Gm17097-201ENSMUST00000166414 714 ntBASIC6.76□□□□□ -1.33
P20040 Mir7115-201ENSMUST00000184275 64 ntBASIC6.76□□□□□ -1.33
P20040 Gm5835-201ENSMUST00000185806 1270 ntBASIC6.76□□□□□ -1.33
P20040 Slamf6-204ENSMUST00000194561 984 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
P20040 Mir7230-201ENSMUST00000195977 56 ntBASIC6.76□□□□□ -1.33
P20040 Igkv8-34-201ENSMUST00000196959 365 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
P20040 Gm30275-201ENSMUST00000197620 498 ntTSL 2 BASIC6.76□□□□□ -1.33
P20040 Gm43694-201ENSMUST00000200773 1119 ntBASIC6.76□□□□□ -1.33
P20040 Gm42887-201ENSMUST00000202469 1119 ntBASIC6.76□□□□□ -1.33
P20040 Gm31579-201ENSMUST00000203306 966 ntBASIC6.76□□□□□ -1.33
P20040 Gm39090-201ENSMUST00000205284 972 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
P20040 Pvrig-201ENSMUST00000211088 1080 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
P20040 Gm30808-201ENSMUST00000211166 845 ntTSL 5 BASIC6.76□□□□□ -1.33
P20040 AC132474.3-201ENSMUST00000213244 383 ntTSL 5 BASIC6.76□□□□□ -1.33
P20040 AC121788.2-201ENSMUST00000218284 1255 ntTSL 5 BASIC6.76□□□□□ -1.33
P20040 Gm8616-201ENSMUST00000222175 1037 ntBASIC6.76□□□□□ -1.33
P20040 AC154595.1-201ENSMUST00000225533 1059 ntBASIC6.76□□□□□ -1.33
P20040 AC124715.2-201ENSMUST00000226762 617 ntBASIC6.76□□□□□ -1.33
P20040 BC048671-201ENSMUST00000054799 1212 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
P20040 Rpsa-ps2-201ENSMUST00000059546 880 ntBASIC6.76□□□□□ -1.33
P20040 Pcp4-201ENSMUST00000061739 641 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
P20040 Vmn1r204-201ENSMUST00000091728 909 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
P20040 Fam205a1-201ENSMUST00000107979 4146 ntAPPRIS P1 TSL 3 BASIC6.76□□□□□ -1.33
P20040 Phf7-206ENSMUST00000228437 1373 ntBASIC6.76□□□□□ -1.33
P20040 Vmn1r184-205ENSMUST00000227790 4334 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
P20040 Hps5-203ENSMUST00000107654 4422 ntAPPRIS P3 TSL 5 BASIC6.76□□□□□ -1.33
P20040 Muc5b-201ENSMUST00000165147 14964 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
P20040 Olfr212-202ENSMUST00000218028 2291 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
P20040 Fmo9-202ENSMUST00000148677 2462 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
P20040 Ifit1bl2-201ENSMUST00000087357 3365 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
P20040 Gal3st2c-201ENSMUST00000097632 9667 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
P20040 Nbas-201ENSMUST00000042953 7234 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
P20040 Med12-201ENSMUST00000087948 6809 ntAPPRIS P2 TSL 1 (best) BASIC6.76□□□□□ -1.33
P20040 8030451A03Rik-203ENSMUST00000141428 2618 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
P20040 Gm13262-201ENSMUST00000149014 2022 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
P20040 Mrgprx2-202ENSMUST00000186394 1930 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
P20040 Lama2-201ENSMUST00000092639 9614 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
P20040 Gm26849-201ENSMUST00000180561 1842 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
P20040 Glra4-201ENSMUST00000018739 1831 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
P20040 Gm13856-201ENSMUST00000126498 1742 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
P20040 Mmp10-201ENSMUST00000034488 1722 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
P20040 Il1f9-201ENSMUST00000057567 1648 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
P20040 Tcf12-221ENSMUST00000185117 3986 ntAPPRIS ALT1 TSL 5 BASIC6.76□□□□□ -1.33
P20040 Gm29500-201ENSMUST00000185992 1344 ntTSL 5 BASIC6.76□□□□□ -1.33
P20040 Lyz2-201ENSMUST00000092163 1316 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
P20040 Rftn2-201ENSMUST00000027121 3677 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
P20040 Gm37915-201ENSMUST00000195134 3261 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
P20040 Vmn1r90-203ENSMUST00000226510 6674 ntAPPRIS ALT2 BASIC6.75□□□□□ -1.33
P20040 Slc4a10-202ENSMUST00000102735 5482 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
P20040 Gm44117-201ENSMUST00000204442 1758 ntBASIC6.75□□□□□ -1.33
P20040 4933430I17Rik-201ENSMUST00000062145 1783 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
P20040 Acod1-201ENSMUST00000022722 2623 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
P20040 Rapgef5-201ENSMUST00000109691 6746 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
P20040 Tead1-206ENSMUST00000164363 1495 ntAPPRIS P4 TSL 5 BASIC6.75□□□□□ -1.33
P20040 Ikzf5-201ENSMUST00000046306 4430 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
P20040 2010110K18Rik-201ENSMUST00000181453 2400 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
P20040 Gm29824-201ENSMUST00000213183 3285 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
P20040 D030068K23Rik-204ENSMUST00000212085 1351 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
P20040 Adgrl4-201ENSMUST00000046977 4106 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
P20040 Armt1-202ENSMUST00000117489 680 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
P20040 Gm14645-201ENSMUST00000118597 417 ntBASIC6.75□□□□□ -1.33
P20040 Gm25845-201ENSMUST00000122588 310 ntBASIC6.75□□□□□ -1.33
P20040 Gm14170-201ENSMUST00000133751 331 ntTSL 3 BASIC6.75□□□□□ -1.33
P20040 Rpl36-ps2-201ENSMUST00000136893 311 ntBASIC6.75□□□□□ -1.33
P20040 Gm11695-201ENSMUST00000144230 407 ntTSL 2 BASIC6.75□□□□□ -1.33
P20040 Gm6465-201ENSMUST00000168154 1098 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
P20040 Lgals1-ps2-201ENSMUST00000170221 519 ntBASIC6.75□□□□□ -1.33
P20040 Commd3-212ENSMUST00000171845 938 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
P20040 Mir6940-201ENSMUST00000183447 70 ntBASIC6.75□□□□□ -1.33
P20040 Mocs2-212ENSMUST00000184214 551 ntTSL 3 BASIC6.75□□□□□ -1.33
P20040 4930533D04Rik-201ENSMUST00000185478 788 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
P20040 Olfr318-201ENSMUST00000189911 1026 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
P20040 Gm21577-201ENSMUST00000190823 697 ntBASIC6.75□□□□□ -1.33
P20040 4933432K03Rik-201ENSMUST00000205739 1247 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
P20040 Gm30196-201ENSMUST00000208957 160 ntBASIC6.75□□□□□ -1.33
P20040 Gm45408-201ENSMUST00000211080 390 ntTSL 5 BASIC6.75□□□□□ -1.33
P20040 Rnf212-206ENSMUST00000212212 924 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
P20040 Gm17875-201ENSMUST00000216005 941 ntBASIC6.75□□□□□ -1.33
P20040 Nqo2-204ENSMUST00000222740 995 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 95.9 ms