Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Gm13944-202ENSMUST00000146495 542 ntTSL 3 BASIC6.16□□□□□ -1.42
Hmgb3O54879 Gm20945-201ENSMUST00000178122 1145 ntBASIC6.16□□□□□ -1.42
Hmgb3O54879 1190005I06Rik-203ENSMUST00000180677 533 ntAPPRIS ALT2 TSL 3 BASIC6.16□□□□□ -1.42
Hmgb3O54879 Gm6931-201ENSMUST00000183103 371 ntBASIC6.16□□□□□ -1.42
Hmgb3O54879 Mir6934-201ENSMUST00000183965 62 ntBASIC6.16□□□□□ -1.42
Hmgb3O54879 Gm18353-201ENSMUST00000185906 784 ntBASIC6.16□□□□□ -1.42
Hmgb3O54879 1700029J03Rik-202ENSMUST00000189879 712 ntTSL 5 BASIC6.16□□□□□ -1.42
Hmgb3O54879 Gm29517-201ENSMUST00000190744 351 ntBASIC6.16□□□□□ -1.42
Hmgb3O54879 Gm37622-201ENSMUST00000192162 285 ntTSL 5 BASIC6.16□□□□□ -1.42
Hmgb3O54879 Gm9729-201ENSMUST00000196364 265 ntBASIC6.16□□□□□ -1.42
Hmgb3O54879 Cnn3-203ENSMUST00000197135 1242 ntTSL 5 BASIC6.16□□□□□ -1.42
Hmgb3O54879 1700113A16Rik-202ENSMUST00000197172 776 ntTSL 2 BASIC6.16□□□□□ -1.42
Hmgb3O54879 Ighv8-16-201ENSMUST00000199258 294 ntBASIC6.16□□□□□ -1.42
Hmgb3O54879 Ube2n-ps1-201ENSMUST00000201768 459 ntBASIC6.16□□□□□ -1.42
Hmgb3O54879 Apoc1-204ENSMUST00000207978 339 ntTSL 3 BASIC6.16□□□□□ -1.42
Hmgb3O54879 E330011O21Rik-201ENSMUST00000209468 1107 ntTSL 5 BASIC6.16□□□□□ -1.42
Hmgb3O54879 4933407I05Rik-201ENSMUST00000213311 482 ntTSL 5 BASIC6.16□□□□□ -1.42
Hmgb3O54879 AC114645.2-201ENSMUST00000214308 791 ntTSL 3 BASIC6.16□□□□□ -1.42
Hmgb3O54879 Gm35035-201ENSMUST00000218838 628 ntTSL 3 BASIC6.16□□□□□ -1.42
Hmgb3O54879 AC154767.1-201ENSMUST00000224669 358 ntBASIC6.16□□□□□ -1.42
Hmgb3O54879 Fate1-201ENSMUST00000066116 938 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Hmgb3O54879 Olfr1502-201ENSMUST00000074221 951 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Hmgb3O54879 Olfr285-201ENSMUST00000079736 960 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Hmgb3O54879 Olfr1231-201ENSMUST00000099786 942 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Hmgb3O54879 Mrgprx2-202ENSMUST00000186394 1930 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Hmgb3O54879 Dppa2-201ENSMUST00000097175 1948 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Hmgb3O54879 Npffr2-201ENSMUST00000048557 1643 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Hmgb3O54879 Fcgr3-201ENSMUST00000164044 1347 ntAPPRIS P2 TSL 1 (best) BASIC6.16□□□□□ -1.42
Hmgb3O54879 C230057A21Rik-201ENSMUST00000194944 3331 ntBASIC6.16□□□□□ -1.42
Hmgb3O54879 Gm44185-201ENSMUST00000204539 3307 ntBASIC6.16□□□□□ -1.42
Hmgb3O54879 Kmo-201ENSMUST00000040250 2695 ntAPPRIS P2 TSL 1 (best) BASIC6.16□□□□□ -1.42
Hmgb3O54879 Tlr1-202ENSMUST00000197315 3025 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Hmgb3O54879 Olfr961-202ENSMUST00000219295 3374 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Hmgb3O54879 Zfp773-202ENSMUST00000211240 4073 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Hmgb3O54879 Gm13571-201ENSMUST00000124654 1381 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Hmgb3O54879 Gm20539-201ENSMUST00000174811 1384 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Hmgb3O54879 2810414N06Rik-201ENSMUST00000186444 1381 ntTSL 2 BASIC6.16□□□□□ -1.42
Hmgb3O54879 Asb11-201ENSMUST00000033755 1369 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Hmgb3O54879 Lcp1-206ENSMUST00000131802 3594 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Hmgb3O54879 Itih5l-ps-201ENSMUST00000145639 3964 ntBASIC6.16□□□□□ -1.42
Hmgb3O54879 Slc22a6-201ENSMUST00000010250 4026 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Hmgb3O54879 Skiv2l2-201ENSMUST00000022281 3689 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Hmgb3O54879 Fbxw21-203ENSMUST00000198076 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
Hmgb3O54879 AC135119.1-202ENSMUST00000228435 2203 ntBASIC6.15□□□□□ -1.42
Hmgb3O54879 Zfp952-201ENSMUST00000087666 2950 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Hmgb3O54879 9130409I23Rik-201ENSMUST00000036819 1898 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Hmgb3O54879 Nlrp10-201ENSMUST00000055745 4504 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Hmgb3O54879 Gm28587-201ENSMUST00000187181 3005 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Hmgb3O54879 Milr1-202ENSMUST00000106794 1514 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
Hmgb3O54879 Gm42819-201ENSMUST00000199630 5121 ntBASIC6.15□□□□□ -1.42
Hmgb3O54879 AC122356.1-202ENSMUST00000227328 2758 ntBASIC6.15□□□□□ -1.42
Hmgb3O54879 Naip5-201ENSMUST00000049789 5204 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Hmgb3O54879 Olfr1418-202ENSMUST00000214796 4046 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
Hmgb3O54879 Olfr1239-202ENSMUST00000216762 1643 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
Hmgb3O54879 Cyp2c66-201ENSMUST00000087234 1630 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Hmgb3O54879 Gm28379-202ENSMUST00000187676 2896 ntBASIC6.15□□□□□ -1.42
Hmgb3O54879 Gm6866-201ENSMUST00000188559 2549 ntBASIC6.15□□□□□ -1.42
Hmgb3O54879 1700029I15Rik-202ENSMUST00000111280 416 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Hmgb3O54879 Gm11922-201ENSMUST00000118967 475 ntBASIC6.15□□□□□ -1.42
Hmgb3O54879 Gm9097-201ENSMUST00000120514 880 ntBASIC6.15□□□□□ -1.42
Hmgb3O54879 Gm14664-201ENSMUST00000142919 437 ntTSL 3 BASIC6.15□□□□□ -1.42
Hmgb3O54879 Gm11464-201ENSMUST00000146963 537 ntTSL 5 BASIC6.15□□□□□ -1.42
Hmgb3O54879 Rubie-201ENSMUST00000151828 1137 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Hmgb3O54879 Cd180-202ENSMUST00000167144 430 ntTSL 2 BASIC6.15□□□□□ -1.42
Hmgb3O54879 Gm24824-201ENSMUST00000175097 78 ntBASIC6.15□□□□□ -1.42
Hmgb3O54879 Gm24083-201ENSMUST00000175174 120 ntBASIC6.15□□□□□ -1.42
Hmgb3O54879 Uchl1os-202ENSMUST00000177319 505 ntTSL 3 BASIC6.15□□□□□ -1.42
Hmgb3O54879 Gm37247-201ENSMUST00000192549 730 ntBASIC6.15□□□□□ -1.42
Hmgb3O54879 Gm37822-201ENSMUST00000192618 1109 ntBASIC6.15□□□□□ -1.42
Hmgb3O54879 Gm2939-201ENSMUST00000198496 478 ntBASIC6.15□□□□□ -1.42
Hmgb3O54879 Gm17977-201ENSMUST00000198743 574 ntBASIC6.15□□□□□ -1.42
Hmgb3O54879 Gm42884-201ENSMUST00000200729 422 ntTSL 2 BASIC6.15□□□□□ -1.42
Hmgb3O54879 4833412C05Rik-202ENSMUST00000208257 850 ntTSL 3 BASIC6.15□□□□□ -1.42
Hmgb3O54879 Gm4800-201ENSMUST00000215776 1266 ntBASIC6.15□□□□□ -1.42
Hmgb3O54879 AC105950.2-201ENSMUST00000220938 368 ntBASIC6.15□□□□□ -1.42
Hmgb3O54879 CT033774.2-201ENSMUST00000222079 256 ntBASIC6.15□□□□□ -1.42
Hmgb3O54879 Smim15-203ENSMUST00000224361 830 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
Hmgb3O54879 AC167013.6-201ENSMUST00000226587 1067 ntBASIC6.15□□□□□ -1.42
Hmgb3O54879 Prap1-201ENSMUST00000026540 620 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Hmgb3O54879 Gm24696-201ENSMUST00000083878 134 ntBASIC6.15□□□□□ -1.42
Hmgb3O54879 Vmn1r204-201ENSMUST00000091728 909 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
Hmgb3O54879 Mllt10-202ENSMUST00000114669 3865 ntTSL 5 BASIC6.15□□□□□ -1.42
Hmgb3O54879 Serpind1-201ENSMUST00000023450 2191 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Hmgb3O54879 Slc38a6-208ENSMUST00000153941 3927 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
Hmgb3O54879 Grip1-208ENSMUST00000138410 3532 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.43
Hmgb3O54879 Gm6493-201ENSMUST00000159889 1786 ntBASIC6.15□□□□□ -1.43
Hmgb3O54879 Adgrv1-201ENSMUST00000095585 19338 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Hmgb3O54879 Ift80-202ENSMUST00000107812 4063 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
Hmgb3O54879 Ccdc158-201ENSMUST00000060930 3676 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Hmgb3O54879 CT009757.6-201ENSMUST00000220661 2312 ntBASIC6.15□□□□□ -1.43
Hmgb3O54879 Olfr532-203ENSMUST00000213801 4232 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
Hmgb3O54879 Glyat-201ENSMUST00000044976 2822 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Hmgb3O54879 C87977-202ENSMUST00000105754 1407 ntAPPRIS ALT2 TSL 3 BASIC6.15□□□□□ -1.43
Hmgb3O54879 0610031O16Rik-203ENSMUST00000185046 1429 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
Hmgb3O54879 Gm34294-201ENSMUST00000191912 4263 ntBASIC6.15□□□□□ -1.43
Hmgb3O54879 Gcsam-201ENSMUST00000023339 3315 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.43
Hmgb3O54879 Ryr3-210ENSMUST00000208151 15370 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.43
Hmgb3O54879 Pola1-201ENSMUST00000006856 5346 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Hmgb3O54879 Gdap1-201ENSMUST00000026879 3949 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Hmgb3O54879 Gm45194-202ENSMUST00000207962 1991 ntAPPRIS P5 TSL 5 BASIC6.15□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms