Protein–RNA interactions for Protein: Q9CQ56

Use1, Vesicle transport protein USE1, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Use1Q9CQ56 Gm38063-201ENSMUST00000193990 342 ntBASIC7.19□□□□□ -1.26
Use1Q9CQ56 Gm36241-201ENSMUST00000201085 493 ntTSL 3 BASIC7.19□□□□□ -1.26
Use1Q9CQ56 Gm26911-203ENSMUST00000204781 369 ntTSL 3 BASIC7.19□□□□□ -1.26
Use1Q9CQ56 Gm4536-201ENSMUST00000209157 542 ntBASIC7.19□□□□□ -1.26
Use1Q9CQ56 AC132474.3-201ENSMUST00000213244 383 ntTSL 5 BASIC7.19□□□□□ -1.26
Use1Q9CQ56 2900045O20Rik-201ENSMUST00000218374 1292 ntTSL 2 BASIC7.19□□□□□ -1.26
Use1Q9CQ56 Gm7727-201ENSMUST00000219830 671 ntBASIC7.19□□□□□ -1.26
Use1Q9CQ56 Gm7441-201ENSMUST00000220697 1074 ntBASIC7.19□□□□□ -1.26
Use1Q9CQ56 E130119H09Rik-201ENSMUST00000223176 978 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Use1Q9CQ56 AC165260.5-201ENSMUST00000224640 1247 ntBASIC7.19□□□□□ -1.26
Use1Q9CQ56 Capsl-201ENSMUST00000042360 949 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Use1Q9CQ56 Pglyrp4-201ENSMUST00000047745 1218 ntAPPRIS P3 TSL 1 (best) BASIC7.19□□□□□ -1.26
Use1Q9CQ56 Dnah10-201ENSMUST00000058440 14038 ntAPPRIS P2 TSL 5 BASIC7.19□□□□□ -1.26
Use1Q9CQ56 1700028K03Rik-201ENSMUST00000058921 797 ntAPPRIS P3 TSL 2 BASIC7.19□□□□□ -1.26
Use1Q9CQ56 Cdkn3-201ENSMUST00000067426 917 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Use1Q9CQ56 Fam136b-ps-201ENSMUST00000068987 412 ntBASIC7.19□□□□□ -1.26
Use1Q9CQ56 Rps6-ps2-201ENSMUST00000079841 747 ntBASIC7.19□□□□□ -1.26
Use1Q9CQ56 Cbx3-ps4-201ENSMUST00000091531 549 ntBASIC7.19□□□□□ -1.26
Use1Q9CQ56 Cbx3-ps5-201ENSMUST00000091545 544 ntBASIC7.19□□□□□ -1.26
Use1Q9CQ56 Slc25a53-203ENSMUST00000113070 3140 ntTSL 5 BASIC7.19□□□□□ -1.26
Use1Q9CQ56 Gm26849-201ENSMUST00000180561 1842 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Use1Q9CQ56 A830082K12Rik-207ENSMUST00000183171 4176 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Use1Q9CQ56 Ermard-204ENSMUST00000097395 1593 ntAPPRIS ALT2 TSL 5 BASIC7.19□□□□□ -1.26
Use1Q9CQ56 A230001M10Rik-202ENSMUST00000196720 1307 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Use1Q9CQ56 Recql5-201ENSMUST00000021097 3971 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Use1Q9CQ56 AC158799.1-204ENSMUST00000217441 1321 ntTSL 5 BASIC7.19□□□□□ -1.26
Use1Q9CQ56 Rgs4-201ENSMUST00000027991 2941 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Use1Q9CQ56 Zfp157-201ENSMUST00000085856 5312 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Use1Q9CQ56 Gm21152-201ENSMUST00000190271 3483 ntBASIC7.19□□□□□ -1.26
Use1Q9CQ56 Gm43961-201ENSMUST00000203289 1872 ntBASIC7.19□□□□□ -1.26
Use1Q9CQ56 Zim3-202ENSMUST00000203365 3226 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Use1Q9CQ56 Gm38070-201ENSMUST00000191850 6480 ntBASIC7.19□□□□□ -1.26
Use1Q9CQ56 Abi1-212ENSMUST00000153931 2729 ntAPPRIS ALT1 TSL 5 BASIC7.19□□□□□ -1.26
Use1Q9CQ56 Mylk3-203ENSMUST00000122452 3036 ntAPPRIS ALT2 TSL 1 (best) BASIC7.19□□□□□ -1.26
Use1Q9CQ56 Slu7-201ENSMUST00000020681 3625 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Use1Q9CQ56 Stambpl1-202ENSMUST00000119603 1664 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Use1Q9CQ56 Sox6-210ENSMUST00000206034 8668 ntAPPRIS ALT2 TSL 5 BASIC7.19□□□□□ -1.26
Use1Q9CQ56 Gm3139-203ENSMUST00000202642 2048 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Use1Q9CQ56 Cd209b-201ENSMUST00000084086 2039 ntAPPRIS P4 TSL 1 (best) BASIC7.18□□□□□ -1.26
Use1Q9CQ56 Trdmt1-202ENSMUST00000124488 3788 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Use1Q9CQ56 Ankrd49-201ENSMUST00000034406 1753 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Use1Q9CQ56 Psd4-202ENSMUST00000102942 11265 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Use1Q9CQ56 Usp8-202ENSMUST00000110416 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
Use1Q9CQ56 A830010M20Rik-203ENSMUST00000100951 4545 ntTSL 5 BASIC7.18□□□□□ -1.26
Use1Q9CQ56 Slirp-204ENSMUST00000161023 2701 ntAPPRIS P2 TSL 1 (best) BASIC7.18□□□□□ -1.26
Use1Q9CQ56 Zfp790-201ENSMUST00000032796 3376 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Use1Q9CQ56 Wac-202ENSMUST00000092112 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
Use1Q9CQ56 Gm37552-201ENSMUST00000193939 2520 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Use1Q9CQ56 Slc4a4-208ENSMUST00000156238 3494 ntAPPRIS ALT2 TSL 5 BASIC7.18□□□□□ -1.26
Use1Q9CQ56 Tcrg-V1-201ENSMUST00000103564 374 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
Use1Q9CQ56 Dppa3-ps-201ENSMUST00000116499 451 ntBASIC7.18□□□□□ -1.26
Use1Q9CQ56 Gm12604-201ENSMUST00000118382 380 ntBASIC7.18□□□□□ -1.26
Use1Q9CQ56 Gm14450-201ENSMUST00000119984 240 ntBASIC7.18□□□□□ -1.26
Use1Q9CQ56 Gm15220-201ENSMUST00000120730 379 ntBASIC7.18□□□□□ -1.26
Use1Q9CQ56 Gm11632-201ENSMUST00000145489 674 ntTSL 3 BASIC7.18□□□□□ -1.26
Use1Q9CQ56 Gm14642-201ENSMUST00000147357 470 ntTSL 3 BASIC7.18□□□□□ -1.26
Use1Q9CQ56 Gm26070-201ENSMUST00000157500 137 ntBASIC7.18□□□□□ -1.26
Use1Q9CQ56 Gm25372-201ENSMUST00000158161 255 ntBASIC7.18□□□□□ -1.26
Use1Q9CQ56 4921523L03Rik-201ENSMUST00000175729 1186 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Use1Q9CQ56 Tdgf1-ps1-201ENSMUST00000179882 516 ntBASIC7.18□□□□□ -1.26
Use1Q9CQ56 1700039M10Rik-201ENSMUST00000180397 532 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Use1Q9CQ56 Tmem147os-201ENSMUST00000180820 1276 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Use1Q9CQ56 Gm26784-201ENSMUST00000181666 410 ntBASIC7.18□□□□□ -1.26
Use1Q9CQ56 Gm26977-201ENSMUST00000183151 996 ntBASIC7.18□□□□□ -1.26
Use1Q9CQ56 Gm18970-201ENSMUST00000186040 938 ntBASIC7.18□□□□□ -1.26
Use1Q9CQ56 Gm28428-201ENSMUST00000188886 697 ntBASIC7.18□□□□□ -1.26
Use1Q9CQ56 Gm7891-201ENSMUST00000190284 843 ntBASIC7.18□□□□□ -1.26
Use1Q9CQ56 Gm37371-201ENSMUST00000194837 392 ntBASIC7.18□□□□□ -1.26
Use1Q9CQ56 Gm5857-201ENSMUST00000198953 493 ntBASIC7.18□□□□□ -1.26
Use1Q9CQ56 Gm17768-201ENSMUST00000201257 378 ntTSL 5 BASIC7.18□□□□□ -1.26
Use1Q9CQ56 Gm44156-201ENSMUST00000203885 1189 ntBASIC7.18□□□□□ -1.26
Use1Q9CQ56 Ceacam-ps1-201ENSMUST00000205380 794 ntTSL 2 BASIC7.18□□□□□ -1.26
Use1Q9CQ56 Olfr696-ps1-201ENSMUST00000207160 948 ntBASIC7.18□□□□□ -1.26
Use1Q9CQ56 Gm44743-201ENSMUST00000209062 386 ntBASIC7.18□□□□□ -1.26
Use1Q9CQ56 Gm32842-201ENSMUST00000212653 738 ntBASIC7.18□□□□□ -1.26
Use1Q9CQ56 Trex1-201ENSMUST00000061973 1084 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Use1Q9CQ56 Olfr1508-202ENSMUST00000206520 5791 ntAPPRIS P1 TSL 2 BASIC7.18□□□□□ -1.26
Use1Q9CQ56 Gm31614-201ENSMUST00000215504 3231 ntTSL 5 BASIC7.18□□□□□ -1.26
Use1Q9CQ56 Mcm4-201ENSMUST00000023353 3589 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Use1Q9CQ56 Amer1-201ENSMUST00000084535 8496 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Use1Q9CQ56 Ifit1bl2-201ENSMUST00000087357 3365 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Use1Q9CQ56 Celf2-214ENSMUST00000170438 8856 ntTSL 5 BASIC7.18□□□□□ -1.26
Use1Q9CQ56 Hmg20a-201ENSMUST00000034879 3778 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Use1Q9CQ56 AC166159.1-201ENSMUST00000227154 1380 ntBASIC7.18□□□□□ -1.26
Use1Q9CQ56 Gm42603-201ENSMUST00000199893 2146 ntBASIC7.18□□□□□ -1.26
Use1Q9CQ56 Nt5c1b-220ENSMUST00000223534 1798 ntAPPRIS ALT2 TSL 5 BASIC7.18□□□□□ -1.26
Use1Q9CQ56 Zfp947-201ENSMUST00000080249 2872 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Use1Q9CQ56 Carf-206ENSMUST00000180952 2157 ntAPPRIS P3 TSL 1 (best) BASIC7.18□□□□□ -1.26
Use1Q9CQ56 Gm42514-201ENSMUST00000196636 1832 ntBASIC7.17□□□□□ -1.26
Use1Q9CQ56 Cyp2c39-201ENSMUST00000025968 1817 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Use1Q9CQ56 Dock9-208ENSMUST00000212376 8107 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
Use1Q9CQ56 Gm43339-201ENSMUST00000200032 1606 ntBASIC7.17□□□□□ -1.26
Use1Q9CQ56 Gm14120-201ENSMUST00000129067 2869 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Use1Q9CQ56 Gm44550-201ENSMUST00000207311 2058 ntBASIC7.17□□□□□ -1.26
Use1Q9CQ56 Znhit3-201ENSMUST00000103195 998 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Use1Q9CQ56 Ighv5-15-201ENSMUST00000103457 350 ntAPPRIS ALT2 BASIC7.17□□□□□ -1.26
Use1Q9CQ56 Smim23-202ENSMUST00000109365 331 ntTSL 5 BASIC7.17□□□□□ -1.26
Use1Q9CQ56 Cep41-202ENSMUST00000115130 485 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Use1Q9CQ56 Gm5228-201ENSMUST00000117186 357 ntBASIC7.17□□□□□ -1.26
Use1Q9CQ56 Gm13622-201ENSMUST00000120658 433 ntBASIC7.17□□□□□ -1.26
Retrieved 100 of 76,532 protein–RNA pairs in 55.2 ms