Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Gm14547-201ENSMUST00000138341 371 ntTSL 5 BASIC6.11□□□□□ -1.43
Nup35Q8R4R6 BC016548-201ENSMUST00000144657 640 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Nup35Q8R4R6 H2afy3-201ENSMUST00000151919 1112 ntBASIC6.11□□□□□ -1.43
Nup35Q8R4R6 Rps12-ps22-201ENSMUST00000179382 402 ntBASIC6.11□□□□□ -1.43
Nup35Q8R4R6 Gm21917-203ENSMUST00000180309 561 ntTSL 3 BASIC6.11□□□□□ -1.43
Nup35Q8R4R6 Mir6403-201ENSMUST00000185007 129 ntBASIC6.11□□□□□ -1.43
Nup35Q8R4R6 Gm6750-201ENSMUST00000189273 268 ntBASIC6.11□□□□□ -1.43
Nup35Q8R4R6 Mark4-ps-201ENSMUST00000196140 384 ntBASIC6.11□□□□□ -1.43
Nup35Q8R4R6 Gm19175-201ENSMUST00000199895 916 ntBASIC6.11□□□□□ -1.43
Nup35Q8R4R6 Gm44743-201ENSMUST00000209062 386 ntBASIC6.11□□□□□ -1.43
Nup35Q8R4R6 Gm7210-201ENSMUST00000209309 1067 ntBASIC6.11□□□□□ -1.43
Nup35Q8R4R6 Gm45481-201ENSMUST00000209717 877 ntBASIC6.11□□□□□ -1.43
Nup35Q8R4R6 Gm5535-206ENSMUST00000210067 679 ntTSL 5 BASIC6.11□□□□□ -1.43
Nup35Q8R4R6 A930040O22Rik-201ENSMUST00000221662 973 ntBASIC6.11□□□□□ -1.43
Nup35Q8R4R6 Rps29-201ENSMUST00000037023 390 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Nup35Q8R4R6 Uchl4-201ENSMUST00000039011 1162 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Nup35Q8R4R6 Olfr23-201ENSMUST00000092917 978 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Nup35Q8R4R6 Olfr1320-201ENSMUST00000096449 960 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Nup35Q8R4R6 Olfr73-201ENSMUST00000099838 942 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Nup35Q8R4R6 Mroh4-201ENSMUST00000023271 3583 ntAPPRIS P2 TSL 1 (best) BASIC6.11□□□□□ -1.43
Nup35Q8R4R6 Dclk1-202ENSMUST00000070418 7012 ntTSL 5 BASIC6.11□□□□□ -1.43
Nup35Q8R4R6 Smc1a-201ENSMUST00000045312 4691 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Nup35Q8R4R6 Phc3-204ENSMUST00000108255 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
Nup35Q8R4R6 Xiap-204ENSMUST00000115095 6670 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Nup35Q8R4R6 Gm44185-201ENSMUST00000204539 3307 ntBASIC6.11□□□□□ -1.43
Nup35Q8R4R6 Gcsam-201ENSMUST00000023339 3315 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
Nup35Q8R4R6 Klhl13-202ENSMUST00000115313 3251 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Nup35Q8R4R6 Vmn1r54-202ENSMUST00000226921 3234 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Nup35Q8R4R6 Dnah17-204ENSMUST00000132685 13612 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
Nup35Q8R4R6 Avpr1b-201ENSMUST00000027690 4023 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Nup35Q8R4R6 2810021J22Rik-201ENSMUST00000073924 3866 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Nup35Q8R4R6 Il1f5-201ENSMUST00000028360 2842 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Nup35Q8R4R6 4930590J08Rik-201ENSMUST00000059318 2802 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Nup35Q8R4R6 Trp63-205ENSMUST00000115306 4691 ntAPPRIS ALT1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Nup35Q8R4R6 Nr2c1-203ENSMUST00000105290 3732 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Nup35Q8R4R6 Galnt15-202ENSMUST00000164208 3563 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Nup35Q8R4R6 Ankrd49-201ENSMUST00000034406 1753 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Nup35Q8R4R6 Vmn2r-ps159-202ENSMUST00000096792 2574 ntBASIC6.11□□□□□ -1.43
Nup35Q8R4R6 Trim75-201ENSMUST00000095295 3273 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Nup35Q8R4R6 Nudt5-201ENSMUST00000026927 4764 ntAPPRIS P1 TSL 3 BASIC6.1□□□□□ -1.43
Nup35Q8R4R6 Psg-ps1-201ENSMUST00000165490 1574 ntBASIC6.1□□□□□ -1.43
Nup35Q8R4R6 Mapre2-209ENSMUST00000170802 3936 ntAPPRIS ALT1 TSL 5 BASIC6.1□□□□□ -1.43
Nup35Q8R4R6 Fam83b-202ENSMUST00000183437 3879 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Nup35Q8R4R6 Vmn2r-ps95-201ENSMUST00000222423 2316 ntBASIC6.1□□□□□ -1.43
Nup35Q8R4R6 Lrrfip2-206ENSMUST00000197241 1500 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Nup35Q8R4R6 Tph1-201ENSMUST00000049298 4562 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Nup35Q8R4R6 Ap1g1-201ENSMUST00000034171 3692 ntAPPRIS ALT1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Nup35Q8R4R6 Dctn4-204ENSMUST00000223984 2948 ntAPPRIS ALT1 BASIC6.1□□□□□ -1.43
Nup35Q8R4R6 Arhgap1-201ENSMUST00000090614 2866 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Nup35Q8R4R6 AC123665.5-201ENSMUST00000226648 1392 ntBASIC6.1□□□□□ -1.43
Nup35Q8R4R6 Dst-209ENSMUST00000182697 2704 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Nup35Q8R4R6 Olfr293-203ENSMUST00000215280 2683 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Nup35Q8R4R6 C230057A21Rik-201ENSMUST00000194944 3331 ntBASIC6.1□□□□□ -1.43
Nup35Q8R4R6 Gm38288-201ENSMUST00000195330 1320 ntBASIC6.1□□□□□ -1.43
Nup35Q8R4R6 Cntn4-206ENSMUST00000113264 5262 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Nup35Q8R4R6 Mug-ps1-202ENSMUST00000189975 3293 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Nup35Q8R4R6 Olfr329-ps-202ENSMUST00000108823 1060 ntAPPRIS P2 BASIC6.1□□□□□ -1.43
Nup35Q8R4R6 Rhox4d-201ENSMUST00000115175 936 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Nup35Q8R4R6 Gm14056-201ENSMUST00000117198 642 ntBASIC6.1□□□□□ -1.43
Nup35Q8R4R6 Gm16221-201ENSMUST00000117331 393 ntBASIC6.1□□□□□ -1.43
Nup35Q8R4R6 Gm11343-201ENSMUST00000120579 599 ntBASIC6.1□□□□□ -1.43
Nup35Q8R4R6 Gm13649-201ENSMUST00000122325 606 ntBASIC6.1□□□□□ -1.43
Nup35Q8R4R6 Gm15929-201ENSMUST00000138926 1161 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Nup35Q8R4R6 Gm11632-201ENSMUST00000145489 674 ntTSL 3 BASIC6.1□□□□□ -1.43
Nup35Q8R4R6 Vmn1r1-201ENSMUST00000169123 921 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Nup35Q8R4R6 Tdgf1-ps1-201ENSMUST00000179882 516 ntBASIC6.1□□□□□ -1.43
Nup35Q8R4R6 Gm3142-201ENSMUST00000190107 414 ntBASIC6.1□□□□□ -1.43
Nup35Q8R4R6 Gm40330-201ENSMUST00000196498 669 ntTSL 3 BASIC6.1□□□□□ -1.43
Nup35Q8R4R6 Gm42861-201ENSMUST00000199596 634 ntBASIC6.1□□□□□ -1.43
Nup35Q8R4R6 4933417G07Rik-201ENSMUST00000199681 1137 ntBASIC6.1□□□□□ -1.43
Nup35Q8R4R6 Gm23927-202ENSMUST00000199928 216 ntBASIC6.1□□□□□ -1.43
Nup35Q8R4R6 4930557J02Rik-201ENSMUST00000202325 1075 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Nup35Q8R4R6 Gm45155-201ENSMUST00000207365 596 ntTSL 2 BASIC6.1□□□□□ -1.43
Nup35Q8R4R6 AC137127.2-201ENSMUST00000215086 935 ntTSL 5 BASIC6.1□□□□□ -1.43
Nup35Q8R4R6 Gm4178-201ENSMUST00000218307 649 ntBASIC6.1□□□□□ -1.43
Nup35Q8R4R6 Gm36827-201ENSMUST00000220080 1249 ntTSL 5 BASIC6.1□□□□□ -1.43
Nup35Q8R4R6 Gm22865-201ENSMUST00000083949 214 ntBASIC6.1□□□□□ -1.43
Nup35Q8R4R6 Olfr1283-201ENSMUST00000090328 1026 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Nup35Q8R4R6 Olfr1055-201ENSMUST00000099894 1182 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Nup35Q8R4R6 Gm28515-201ENSMUST00000189823 2530 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Nup35Q8R4R6 Macrod2os1-201ENSMUST00000151538 3131 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Nup35Q8R4R6 Dock9-208ENSMUST00000212376 8107 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
Nup35Q8R4R6 Gm26659-201ENSMUST00000181816 3655 ntTSL 5 BASIC6.1□□□□□ -1.43
Nup35Q8R4R6 Fam193a-201ENSMUST00000094867 3696 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
Nup35Q8R4R6 Mrpl1-202ENSMUST00000117766 3556 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Nup35Q8R4R6 AC151984.1-201ENSMUST00000218261 2976 ntBASIC6.1□□□□□ -1.43
Nup35Q8R4R6 Arhgap6-203ENSMUST00000112127 3973 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Nup35Q8R4R6 Olfr460-202ENSMUST00000216942 3370 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Nup35Q8R4R6 Gm35722-201ENSMUST00000218270 1625 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Nup35Q8R4R6 Pikfyve-201ENSMUST00000081154 11237 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
Nup35Q8R4R6 Olfr727-202ENSMUST00000215317 2616 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Nup35Q8R4R6 1110008L16Rik-201ENSMUST00000021411 3122 ntAPPRIS P2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Nup35Q8R4R6 Crbn-202ENSMUST00000113239 2084 ntAPPRIS P4 TSL 1 (best) BASIC6.1□□□□□ -1.43
Nup35Q8R4R6 Zmat3-201ENSMUST00000029199 7797 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Nup35Q8R4R6 AC154257.1-201ENSMUST00000224811 1525 ntBASIC6.09□□□□□ -1.43
Nup35Q8R4R6 Olfr1045-202ENSMUST00000215763 2960 ntAPPRIS P1 TSL 3 BASIC6.09□□□□□ -1.43
Nup35Q8R4R6 Cdhr3-201ENSMUST00000095774 2953 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Nup35Q8R4R6 Apobec3-202ENSMUST00000109620 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
Nup35Q8R4R6 Olfr1183-202ENSMUST00000213115 8258 ntTSL 5 BASIC6.09□□□□□ -1.43
Nup35Q8R4R6 Zfp964-201ENSMUST00000169125 1416 ntTSL 3 BASIC6.09□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 73.9 ms