Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Gm28126-201ENSMUST00000185286 356 ntTSL 5 BASIC7.37□□□□□ -1.23
Clrn1Q8K445 Gm28421-201ENSMUST00000186378 356 ntTSL 5 BASIC7.37□□□□□ -1.23
Clrn1Q8K445 Gm6799-201ENSMUST00000186919 573 ntBASIC7.37□□□□□ -1.23
Clrn1Q8K445 Gm28212-201ENSMUST00000187114 356 ntTSL 5 BASIC7.37□□□□□ -1.23
Clrn1Q8K445 Gm28355-201ENSMUST00000187443 356 ntTSL 5 BASIC7.37□□□□□ -1.23
Clrn1Q8K445 Gm29568-201ENSMUST00000187884 356 ntTSL 5 BASIC7.37□□□□□ -1.23
Clrn1Q8K445 Gm29080-201ENSMUST00000188565 356 ntTSL 5 BASIC7.37□□□□□ -1.23
Clrn1Q8K445 Gm28944-201ENSMUST00000188946 356 ntTSL 5 BASIC7.37□□□□□ -1.23
Clrn1Q8K445 Gm28908-201ENSMUST00000189002 356 ntTSL 5 BASIC7.37□□□□□ -1.23
Clrn1Q8K445 1700096J18Rik-201ENSMUST00000190043 482 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Clrn1Q8K445 Gm29078-201ENSMUST00000190611 356 ntTSL 5 BASIC7.37□□□□□ -1.23
Clrn1Q8K445 Gm34217-201ENSMUST00000193562 356 ntTSL 5 BASIC7.37□□□□□ -1.23
Clrn1Q8K445 Gatad1-204ENSMUST00000196304 704 ntTSL 3 BASIC7.37□□□□□ -1.23
Clrn1Q8K445 Trav22-201ENSMUST00000198117 346 ntBASIC7.37□□□□□ -1.23
Clrn1Q8K445 Gm43008-201ENSMUST00000202346 286 ntBASIC7.37□□□□□ -1.23
Clrn1Q8K445 Gm44721-201ENSMUST00000206978 472 ntBASIC7.37□□□□□ -1.23
Clrn1Q8K445 Gm45241-201ENSMUST00000211237 634 ntTSL 5 BASIC7.37□□□□□ -1.23
Clrn1Q8K445 AC124585.1-201ENSMUST00000213334 953 ntTSL 5 BASIC7.37□□□□□ -1.23
Clrn1Q8K445 AC158799.1-201ENSMUST00000214686 617 ntTSL 5 BASIC7.37□□□□□ -1.23
Clrn1Q8K445 AC154307.1-201ENSMUST00000214799 90 ntBASIC7.37□□□□□ -1.23
Clrn1Q8K445 AC153529.1-201ENSMUST00000217818 370 ntBASIC7.37□□□□□ -1.23
Clrn1Q8K445 AC111092.1-201ENSMUST00000220181 411 ntTSL 3 BASIC7.37□□□□□ -1.23
Clrn1Q8K445 RMST_1.1-214ENSMUST00000220389 633 ntTSL 2 BASIC7.37□□□□□ -1.23
Clrn1Q8K445 Spp2-201ENSMUST00000027518 928 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Clrn1Q8K445 Capsl-201ENSMUST00000042360 949 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Clrn1Q8K445 Olfr812-201ENSMUST00000057775 1043 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
Clrn1Q8K445 Cldn34b2-201ENSMUST00000076671 1077 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Clrn1Q8K445 Gm4956-201ENSMUST00000082032 1148 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Clrn1Q8K445 Grxcr1-201ENSMUST00000094715 1071 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Clrn1Q8K445 Rpl27-ps3-201ENSMUST00000097682 475 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
Clrn1Q8K445 Gm37510-201ENSMUST00000194151 4762 ntBASIC7.37□□□□□ -1.23
Clrn1Q8K445 Parp11-203ENSMUST00000112193 1725 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Clrn1Q8K445 Rere-201ENSMUST00000105680 6503 ntAPPRIS ALT2 TSL 5 BASIC7.37□□□□□ -1.23
Clrn1Q8K445 Clec1a-201ENSMUST00000037481 3123 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Clrn1Q8K445 Gm10558-201ENSMUST00000147494 1661 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Clrn1Q8K445 Btbd18-201ENSMUST00000133437 3052 ntAPPRIS P1 TSL 3 BASIC7.37□□□□□ -1.23
Clrn1Q8K445 Masp2-201ENSMUST00000052060 3058 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Clrn1Q8K445 Krt39-202ENSMUST00000107445 1633 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
Clrn1Q8K445 Pclo-201ENSMUST00000030691 20084 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
Clrn1Q8K445 Tnik-203ENSMUST00000159680 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
Clrn1Q8K445 4930562C15Rik-201ENSMUST00000100211 3829 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
Clrn1Q8K445 Nipsnap3a-202ENSMUST00000107666 1553 ntAPPRIS ALT2 TSL 5 BASIC7.37□□□□□ -1.23
Clrn1Q8K445 Gm20121-201ENSMUST00000198547 1594 ntBASIC7.37□□□□□ -1.23
Clrn1Q8K445 Ggta1-204ENSMUST00000113001 3340 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
Clrn1Q8K445 Zscan18-203ENSMUST00000210650 3668 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
Clrn1Q8K445 Zfp780b-203ENSMUST00000205874 1907 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Clrn1Q8K445 Prrg1-202ENSMUST00000114025 3964 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Clrn1Q8K445 Fgf1-201ENSMUST00000040647 3981 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Clrn1Q8K445 Osbpl6-201ENSMUST00000077972 8037 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Clrn1Q8K445 Grhl1-201ENSMUST00000020985 3070 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Clrn1Q8K445 CT009718.2-201ENSMUST00000221408 1428 ntTSL 5 BASIC7.36□□□□□ -1.23
Clrn1Q8K445 Gm44249-201ENSMUST00000204538 1805 ntBASIC7.36□□□□□ -1.23
Clrn1Q8K445 Gm28497-201ENSMUST00000189646 3029 ntBASIC7.36□□□□□ -1.23
Clrn1Q8K445 Itgae-202ENSMUST00000102537 3825 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
Clrn1Q8K445 9330102E08Rik-201ENSMUST00000204642 3843 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Clrn1Q8K445 Rufy3-207ENSMUST00000199312 2182 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Clrn1Q8K445 Ankrd49-201ENSMUST00000034406 1753 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Clrn1Q8K445 Usp50-201ENSMUST00000028842 1361 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Clrn1Q8K445 Pcm1-204ENSMUST00000211247 6484 ntAPPRIS ALT2 TSL 5 BASIC7.36□□□□□ -1.23
Clrn1Q8K445 Nrxn3-210ENSMUST00000167887 3303 ntTSL 5 BASIC7.36□□□□□ -1.23
Clrn1Q8K445 3830406C13Rik-201ENSMUST00000112669 2477 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Clrn1Q8K445 3830406C13Rik-202ENSMUST00000163392 2452 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Clrn1Q8K445 Glrb-206ENSMUST00000194085 1341 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Clrn1Q8K445 Gm13490-201ENSMUST00000143870 2409 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Clrn1Q8K445 Dhcr7-207ENSMUST00000141916 2752 ntAPPRIS P2 TSL 5 BASIC7.36□□□□□ -1.23
Clrn1Q8K445 Slc22a26-201ENSMUST00000065634 2007 ntAPPRIS P2 TSL 1 (best) BASIC7.36□□□□□ -1.23
Clrn1Q8K445 Gm26429-201ENSMUST00000104829 110 ntBASIC7.36□□□□□ -1.23
Clrn1Q8K445 Gm11907-201ENSMUST00000118918 1007 ntBASIC7.36□□□□□ -1.23
Clrn1Q8K445 Gm5390-201ENSMUST00000119069 1230 ntBASIC7.36□□□□□ -1.23
Clrn1Q8K445 Gm12757-201ENSMUST00000119465 800 ntBASIC7.36□□□□□ -1.23
Clrn1Q8K445 Bambi-ps1-201ENSMUST00000121525 592 ntBASIC7.36□□□□□ -1.23
Clrn1Q8K445 Scgb2b22-ps-201ENSMUST00000121947 340 ntBASIC7.36□□□□□ -1.23
Clrn1Q8K445 Gm13538-201ENSMUST00000143166 548 ntTSL 3 BASIC7.36□□□□□ -1.23
Clrn1Q8K445 Gm24994-201ENSMUST00000157414 121 ntBASIC7.36□□□□□ -1.23
Clrn1Q8K445 Gm23533-201ENSMUST00000157540 245 ntBASIC7.36□□□□□ -1.23
Clrn1Q8K445 Gm23663-201ENSMUST00000158045 80 ntBASIC7.36□□□□□ -1.23
Clrn1Q8K445 Gm17122-201ENSMUST00000166047 372 ntTSL 5 BASIC7.36□□□□□ -1.23
Clrn1Q8K445 Adam3-210ENSMUST00000171611 1202 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Clrn1Q8K445 Paip1-206ENSMUST00000173627 1233 ntTSL 5 BASIC7.36□□□□□ -1.23
Clrn1Q8K445 9330159M07Rik-204ENSMUST00000188156 737 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Clrn1Q8K445 Gm36996-201ENSMUST00000194466 250 ntBASIC7.36□□□□□ -1.23
Clrn1Q8K445 Slamf6-204ENSMUST00000194561 984 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
Clrn1Q8K445 Gm37830-201ENSMUST00000195282 837 ntTSL 5 BASIC7.36□□□□□ -1.23
Clrn1Q8K445 Gm36667-201ENSMUST00000196125 753 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Clrn1Q8K445 Olfr737-ps1-201ENSMUST00000205382 283 ntBASIC7.36□□□□□ -1.23
Clrn1Q8K445 Mypopos-204ENSMUST00000206381 473 ntTSL 2 BASIC7.36□□□□□ -1.23
Clrn1Q8K445 Gm44656-201ENSMUST00000208428 490 ntBASIC7.36□□□□□ -1.23
Clrn1Q8K445 Gm44869-201ENSMUST00000208836 357 ntBASIC7.36□□□□□ -1.23
Clrn1Q8K445 Gm20586-201ENSMUST00000210122 547 ntBASIC7.36□□□□□ -1.23
Clrn1Q8K445 Spaca7-203ENSMUST00000210276 715 ntAPPRIS ALT2 TSL 5 BASIC7.36□□□□□ -1.23
Clrn1Q8K445 Olfr664-202ENSMUST00000211596 921 ntAPPRIS ALT2 BASIC7.36□□□□□ -1.23
Clrn1Q8K445 Gm8767-201ENSMUST00000215786 1070 ntBASIC7.36□□□□□ -1.23
Clrn1Q8K445 4930471E19Rik-202ENSMUST00000219150 737 ntTSL 3 BASIC7.36□□□□□ -1.23
Clrn1Q8K445 Gm34574-202ENSMUST00000219433 1108 ntTSL 5 BASIC7.36□□□□□ -1.23
Clrn1Q8K445 AC092710.1-201ENSMUST00000221005 192 ntBASIC7.36□□□□□ -1.23
Clrn1Q8K445 AC126043.1-201ENSMUST00000221304 1141 ntBASIC7.36□□□□□ -1.23
Clrn1Q8K445 Tmed5-201ENSMUST00000002837 3800 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Clrn1Q8K445 V1ra8-201ENSMUST00000078371 890 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
Clrn1Q8K445 Gm16233-201ENSMUST00000136170 1623 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Clrn1Q8K445 Rnf24-204ENSMUST00000165420 5833 ntAPPRIS P1 TSL 3 BASIC7.36□□□□□ -1.23
Retrieved 100 of 76,532 protein–RNA pairs in 70.8 ms