Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Aamdc-201ENSMUST00000042627 627 ntTSL 3 BASIC8.57□□□□□ -1.04
Ccdc38Q8CDN8 Olfr1509-201ENSMUST00000045066 1010 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
Ccdc38Q8CDN8 Trex1-201ENSMUST00000061973 1084 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Ccdc38Q8CDN8 Gm4956-201ENSMUST00000082032 1148 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Ccdc38Q8CDN8 T2-201ENSMUST00000163578 1755 ntTSL 5 BASIC8.57□□□□□ -1.04
Ccdc38Q8CDN8 Ankrd49-201ENSMUST00000034406 1753 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Ccdc38Q8CDN8 Mep1b-201ENSMUST00000082235 2286 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Ccdc38Q8CDN8 Abcc12-203ENSMUST00000131423 4893 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
Ccdc38Q8CDN8 Frmd7-201ENSMUST00000060650 2112 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
Ccdc38Q8CDN8 Nf1-201ENSMUST00000071325 11917 ntAPPRIS P2 TSL 2 BASIC8.57□□□□□ -1.04
Ccdc38Q8CDN8 Specc1-203ENSMUST00000108709 6843 ntAPPRIS ALT2 TSL 5 BASIC8.57□□□□□ -1.04
Ccdc38Q8CDN8 Olfr122-204ENSMUST00000217119 2224 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
Ccdc38Q8CDN8 Gm10419-204ENSMUST00000198585 4059 ntTSL 2 BASIC8.57□□□□□ -1.04
Ccdc38Q8CDN8 Panct2-201ENSMUST00000181489 3849 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Ccdc38Q8CDN8 Gm36950-201ENSMUST00000191738 1499 ntTSL 5 BASIC8.57□□□□□ -1.04
Ccdc38Q8CDN8 Slco1a6-201ENSMUST00000111827 2815 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Ccdc38Q8CDN8 E230015B07Rik-202ENSMUST00000159884 2822 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Ccdc38Q8CDN8 Pfkfb3-214ENSMUST00000179584 4756 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Ccdc38Q8CDN8 Rab39b-201ENSMUST00000033545 3401 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Ccdc38Q8CDN8 Gm44550-201ENSMUST00000207311 2058 ntBASIC8.57□□□□□ -1.04
Ccdc38Q8CDN8 Pum1-203ENSMUST00000097864 4017 ntAPPRIS ALT1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Ccdc38Q8CDN8 Strbp-202ENSMUST00000072186 3144 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Ccdc38Q8CDN8 Pcnx4-201ENSMUST00000044352 4300 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Ccdc38Q8CDN8 Gm43534-201ENSMUST00000197685 2853 ntBASIC8.56□□□□□ -1.04
Ccdc38Q8CDN8 Gm8844-201ENSMUST00000119460 2614 ntBASIC8.56□□□□□ -1.04
Ccdc38Q8CDN8 Arhgap32-201ENSMUST00000168954 8703 ntTSL 5 BASIC8.56□□□□□ -1.04
Ccdc38Q8CDN8 Gm43623-201ENSMUST00000199289 2663 ntBASIC8.56□□□□□ -1.04
Ccdc38Q8CDN8 Gm45084-201ENSMUST00000207096 1957 ntBASIC8.56□□□□□ -1.04
Ccdc38Q8CDN8 Gm8802-201ENSMUST00000118633 740 ntBASIC8.56□□□□□ -1.04
Ccdc38Q8CDN8 Gm14016-201ENSMUST00000119095 486 ntBASIC8.56□□□□□ -1.04
Ccdc38Q8CDN8 Fau-ps2-201ENSMUST00000119333 371 ntBASIC8.56□□□□□ -1.04
Ccdc38Q8CDN8 Gm14824-201ENSMUST00000119421 737 ntBASIC8.56□□□□□ -1.04
Ccdc38Q8CDN8 Rpl9-ps2-201ENSMUST00000120821 577 ntBASIC8.56□□□□□ -1.04
Ccdc38Q8CDN8 Milr1-203ENSMUST00000147326 1234 ntAPPRIS P3 TSL 5 BASIC8.56□□□□□ -1.04
Ccdc38Q8CDN8 Gm11789-205ENSMUST00000148579 649 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Ccdc38Q8CDN8 Gm24899-201ENSMUST00000158892 73 ntBASIC8.56□□□□□ -1.04
Ccdc38Q8CDN8 Gm17051-201ENSMUST00000170787 487 ntBASIC8.56□□□□□ -1.04
Ccdc38Q8CDN8 Csnk2b-203ENSMUST00000173114 917 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Ccdc38Q8CDN8 Gm26436-201ENSMUST00000180325 132 ntBASIC8.56□□□□□ -1.04
Ccdc38Q8CDN8 Mark1-ps3-201ENSMUST00000184922 694 ntBASIC8.56□□□□□ -1.04
Ccdc38Q8CDN8 Gm18970-201ENSMUST00000186040 938 ntBASIC8.56□□□□□ -1.04
Ccdc38Q8CDN8 Gm8307-201ENSMUST00000187682 1150 ntBASIC8.56□□□□□ -1.04
Ccdc38Q8CDN8 Gm37800-201ENSMUST00000192129 664 ntTSL 5 BASIC8.56□□□□□ -1.04
Ccdc38Q8CDN8 C630050I24Rik-201ENSMUST00000193420 783 ntBASIC8.56□□□□□ -1.04
Ccdc38Q8CDN8 Gm43351-201ENSMUST00000198737 326 ntTSL 5 BASIC8.56□□□□□ -1.04
Ccdc38Q8CDN8 Gm44451-201ENSMUST00000203767 483 ntBASIC8.56□□□□□ -1.04
Ccdc38Q8CDN8 Gm9689-201ENSMUST00000210009 428 ntBASIC8.56□□□□□ -1.04
Ccdc38Q8CDN8 Gm45350-201ENSMUST00000210560 509 ntTSL 5 BASIC8.56□□□□□ -1.04
Ccdc38Q8CDN8 Gm45391-201ENSMUST00000211563 576 ntTSL 5 BASIC8.56□□□□□ -1.04
Ccdc38Q8CDN8 Gm39329-201ENSMUST00000215849 798 ntTSL 5 BASIC8.56□□□□□ -1.04
Ccdc38Q8CDN8 Gm5374-202ENSMUST00000222910 314 ntBASIC8.56□□□□□ -1.04
Ccdc38Q8CDN8 AC139323.1-201ENSMUST00000223370 1040 ntBASIC8.56□□□□□ -1.04
Ccdc38Q8CDN8 AC161374.2-201ENSMUST00000223662 596 ntBASIC8.56□□□□□ -1.04
Ccdc38Q8CDN8 AC154506.2-201ENSMUST00000225481 1276 ntBASIC8.56□□□□□ -1.04
Ccdc38Q8CDN8 AC165155.1-201ENSMUST00000228932 445 ntBASIC8.56□□□□□ -1.04
Ccdc38Q8CDN8 Capsl-201ENSMUST00000042360 949 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Ccdc38Q8CDN8 Olfr1510-201ENSMUST00000079459 1014 ntAPPRIS P1 BASIC8.56□□□□□ -1.04
Ccdc38Q8CDN8 Cbx3-ps5-201ENSMUST00000091545 544 ntBASIC8.56□□□□□ -1.04
Ccdc38Q8CDN8 Gm32647-202ENSMUST00000206579 3147 ntTSL 3 BASIC8.56□□□□□ -1.04
Ccdc38Q8CDN8 St8sia4-201ENSMUST00000043336 5390 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Ccdc38Q8CDN8 Olfr727-202ENSMUST00000215317 2616 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
Ccdc38Q8CDN8 Zfp560-201ENSMUST00000068079 4751 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Ccdc38Q8CDN8 Hipk1-202ENSMUST00000106845 3967 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Ccdc38Q8CDN8 Gm8765-201ENSMUST00000099518 3152 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Ccdc38Q8CDN8 Gm906-201ENSMUST00000099521 3152 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Ccdc38Q8CDN8 Phactr2-204ENSMUST00000105546 2808 ntAPPRIS ALT2 TSL 5 BASIC8.56□□□□□ -1.04
Ccdc38Q8CDN8 Arpp21-210ENSMUST00000159451 2805 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Ccdc38Q8CDN8 C1s1-204ENSMUST00000162443 2906 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Ccdc38Q8CDN8 Gm28649-201ENSMUST00000189153 1581 ntBASIC8.56□□□□□ -1.04
Ccdc38Q8CDN8 Gm42603-201ENSMUST00000199893 2146 ntBASIC8.56□□□□□ -1.04
Ccdc38Q8CDN8 Zscan4b-202ENSMUST00000210847 1779 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
Ccdc38Q8CDN8 Srcap-214ENSMUST00000190390 9633 ntAPPRIS ALT2 TSL 5 BASIC8.55□□□□□ -1.04
Ccdc38Q8CDN8 Gprasp1-206ENSMUST00000166554 4993 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Ccdc38Q8CDN8 Gm21977-201ENSMUST00000163725 1402 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
Ccdc38Q8CDN8 Gm8068-201ENSMUST00000167440 1402 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
Ccdc38Q8CDN8 Rgs7-201ENSMUST00000027812 1418 ntAPPRIS P3 TSL 5 BASIC8.55□□□□□ -1.04
Ccdc38Q8CDN8 Slc12a6-201ENSMUST00000028549 6105 ntAPPRIS P4 TSL 1 (best) BASIC8.55□□□□□ -1.04
Ccdc38Q8CDN8 Ptrhd1-201ENSMUST00000179139 3840 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Ccdc38Q8CDN8 Crbn-202ENSMUST00000113239 2084 ntAPPRIS P4 TSL 1 (best) BASIC8.55□□□□□ -1.04
Ccdc38Q8CDN8 Gm26786-201ENSMUST00000180410 6243 ntTSL 5 BASIC8.55□□□□□ -1.04
Ccdc38Q8CDN8 Tpo-201ENSMUST00000021005 3299 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Ccdc38Q8CDN8 Gm5841-201ENSMUST00000195307 2177 ntBASIC8.55□□□□□ -1.04
Ccdc38Q8CDN8 Lemd1-205ENSMUST00000188169 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
Ccdc38Q8CDN8 Olfr131-203ENSMUST00000215940 1614 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
Ccdc38Q8CDN8 AI182371-207ENSMUST00000226972 1642 ntAPPRIS ALT2 BASIC8.55□□□□□ -1.04
Ccdc38Q8CDN8 Apobec3-203ENSMUST00000165537 2360 ntAPPRIS P3 TSL 1 (best) BASIC8.55□□□□□ -1.04
Ccdc38Q8CDN8 Gm3460-201ENSMUST00000167882 1809 ntAPPRIS P5 TSL 5 BASIC8.55□□□□□ -1.04
Ccdc38Q8CDN8 Mov10l1-201ENSMUST00000015509 4052 ntAPPRIS P2 TSL 5 BASIC8.55□□□□□ -1.04
Ccdc38Q8CDN8 Plce1-201ENSMUST00000169713 9439 ntAPPRIS P2 TSL 1 (best) BASIC8.55□□□□□ -1.04
Ccdc38Q8CDN8 Fasl-201ENSMUST00000000834 1937 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Ccdc38Q8CDN8 2310039L15Rik-202ENSMUST00000219492 3743 ntTSL 5 BASIC8.55□□□□□ -1.04
Ccdc38Q8CDN8 Gm25608-201ENSMUST00000104021 132 ntBASIC8.55□□□□□ -1.04
Ccdc38Q8CDN8 Ccdc163-203ENSMUST00000106463 1159 ntAPPRIS P2 TSL 5 BASIC8.55□□□□□ -1.04
Ccdc38Q8CDN8 Fgf2-203ENSMUST00000108120 526 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Ccdc38Q8CDN8 Fate1-202ENSMUST00000114569 1053 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
Ccdc38Q8CDN8 Gm5915-201ENSMUST00000116136 454 ntBASIC8.55□□□□□ -1.04
Ccdc38Q8CDN8 Gm12464-201ENSMUST00000121385 1016 ntBASIC8.55□□□□□ -1.04
Ccdc38Q8CDN8 Gm25842-201ENSMUST00000122590 322 ntBASIC8.55□□□□□ -1.04
Ccdc38Q8CDN8 Pla2g2a-203ENSMUST00000135748 788 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Ccdc38Q8CDN8 Crem-218ENSMUST00000139537 807 ntTSL 2 BASIC8.55□□□□□ -1.04
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms