Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Gm42678-201ENSMUST00000197163 2221 ntBASIC9.67□□□□□ -0.86
Ccdc60Q8C4J0 Mtm1-206ENSMUST00000114621 3257 ntTSL 5 BASIC9.67□□□□□ -0.86
Ccdc60Q8C4J0 Etv5-203ENSMUST00000168774 3773 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Ccdc60Q8C4J0 D330045A20Rik-201ENSMUST00000046763 3737 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Ccdc60Q8C4J0 Dgkb-201ENSMUST00000040500 6373 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Ccdc60Q8C4J0 4933406J09Rik-201ENSMUST00000203352 1505 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Ccdc60Q8C4J0 Fgf1-201ENSMUST00000040647 3981 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Ccdc60Q8C4J0 BC085271-201ENSMUST00000191852 1487 ntBASIC9.66□□□□□ -0.86
Ccdc60Q8C4J0 Arhgef9-209ENSMUST00000181987 6222 ntTSL 2 BASIC9.66□□□□□ -0.86
Ccdc60Q8C4J0 Olfr376-202ENSMUST00000120401 3342 ntAPPRIS P3 TSL 2 BASIC9.66□□□□□ -0.86
Ccdc60Q8C4J0 AI662270-202ENSMUST00000143673 1428 ntTSL 5 BASIC9.66□□□□□ -0.86
Ccdc60Q8C4J0 Gm19028-201ENSMUST00000189614 1873 ntBASIC9.66□□□□□ -0.86
Ccdc60Q8C4J0 Olfr169-204ENSMUST00000216070 2328 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Ccdc60Q8C4J0 Hrh2-201ENSMUST00000038101 2789 ntAPPRIS P2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Ccdc60Q8C4J0 Clca3a2-201ENSMUST00000029929 3654 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Ccdc60Q8C4J0 St7-203ENSMUST00000053148 2288 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Ccdc60Q8C4J0 Dbhos-201ENSMUST00000150024 4020 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Ccdc60Q8C4J0 Parp8-201ENSMUST00000022239 3098 ntTSL 5 BASIC9.66□□□□□ -0.86
Ccdc60Q8C4J0 Fate1-202ENSMUST00000114569 1053 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Ccdc60Q8C4J0 1810022K09Rik-202ENSMUST00000185384 435 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
Ccdc60Q8C4J0 2010308F09Rik-202ENSMUST00000186931 578 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Ccdc60Q8C4J0 Shisa5-207ENSMUST00000197483 534 ntTSL 3 BASIC9.66□□□□□ -0.86
Ccdc60Q8C4J0 Gm31305-201ENSMUST00000198557 710 ntTSL 3 BASIC9.66□□□□□ -0.86
Ccdc60Q8C4J0 Gm42723-201ENSMUST00000199966 1044 ntBASIC9.66□□□□□ -0.86
Ccdc60Q8C4J0 Gm43226-201ENSMUST00000202438 259 ntBASIC9.66□□□□□ -0.86
Ccdc60Q8C4J0 Gm36816-201ENSMUST00000204824 493 ntTSL 3 BASIC9.66□□□□□ -0.86
Ccdc60Q8C4J0 Kcne3-205ENSMUST00000207358 1154 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Ccdc60Q8C4J0 4930477G07Rik-202ENSMUST00000223195 947 ntTSL 5 BASIC9.66□□□□□ -0.86
Ccdc60Q8C4J0 AC162183.1-201ENSMUST00000224843 472 ntBASIC9.66□□□□□ -0.86
Ccdc60Q8C4J0 CT009550.2-201ENSMUST00000228851 399 ntBASIC9.66□□□□□ -0.86
Ccdc60Q8C4J0 Clec4n-201ENSMUST00000024118 1229 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
Ccdc60Q8C4J0 Ccdc150-201ENSMUST00000027128 3807 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Ccdc60Q8C4J0 Fate1-201ENSMUST00000066116 938 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Ccdc60Q8C4J0 Rpl27a-ps1-201ENSMUST00000075382 448 ntBASIC9.66□□□□□ -0.86
Ccdc60Q8C4J0 Olfr676-201ENSMUST00000098162 954 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
Ccdc60Q8C4J0 Sulf1-201ENSMUST00000088585 4630 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Ccdc60Q8C4J0 Apbb2-204ENSMUST00000159786 6333 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Ccdc60Q8C4J0 Gm5903-201ENSMUST00000121836 2325 ntBASIC9.66□□□□□ -0.86
Ccdc60Q8C4J0 Cep170-212ENSMUST00000194727 6784 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
Ccdc60Q8C4J0 Dock8-201ENSMUST00000025831 7810 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Ccdc60Q8C4J0 4930524O08Rik-201ENSMUST00000183387 1451 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Ccdc60Q8C4J0 Ganc-205ENSMUST00000135074 4780 ntAPPRIS P1 TSL 2 BASIC9.66□□□□□ -0.86
Ccdc60Q8C4J0 Zc3h11a-201ENSMUST00000027736 4395 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Ccdc60Q8C4J0 Mybbp1a-201ENSMUST00000045633 4358 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Ccdc60Q8C4J0 C87436-203ENSMUST00000113700 2523 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Ccdc60Q8C4J0 Slc12a1-203ENSMUST00000110495 4642 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.86
Ccdc60Q8C4J0 Kcnj15-203ENSMUST00000113855 5128 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Ccdc60Q8C4J0 Morc1-201ENSMUST00000023330 3050 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Ccdc60Q8C4J0 Cd44-206ENSMUST00000111192 1305 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.86
Ccdc60Q8C4J0 Gm38288-201ENSMUST00000195330 1320 ntBASIC9.65□□□□□ -0.86
Ccdc60Q8C4J0 Farsb-201ENSMUST00000068333 1951 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Ccdc60Q8C4J0 Rbpj-201ENSMUST00000037618 5459 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Ccdc60Q8C4J0 Plb1-205ENSMUST00000202201 3539 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Ccdc60Q8C4J0 Mobp-203ENSMUST00000111627 481 ntAPPRIS P1 TSL 2 BASIC9.65□□□□□ -0.86
Ccdc60Q8C4J0 Gm11688-201ENSMUST00000122145 308 ntBASIC9.65□□□□□ -0.86
Ccdc60Q8C4J0 Babam2-205ENSMUST00000131995 1220 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Ccdc60Q8C4J0 Scgb1b28-ps-201ENSMUST00000163647 290 ntBASIC9.65□□□□□ -0.86
Ccdc60Q8C4J0 Gm18709-201ENSMUST00000180564 489 ntBASIC9.65□□□□□ -0.86
Ccdc60Q8C4J0 Gm26784-201ENSMUST00000181666 410 ntBASIC9.65□□□□□ -0.86
Ccdc60Q8C4J0 Gm27542-201ENSMUST00000184184 256 ntBASIC9.65□□□□□ -0.86
Ccdc60Q8C4J0 Ets1-205ENSMUST00000184364 678 ntTSL 5 BASIC9.65□□□□□ -0.86
Ccdc60Q8C4J0 Gm36945-201ENSMUST00000192040 864 ntTSL 3 BASIC9.65□□□□□ -0.86
Ccdc60Q8C4J0 Gm7369-201ENSMUST00000192738 936 ntBASIC9.65□□□□□ -0.86
Ccdc60Q8C4J0 D13Ertd608e-202ENSMUST00000195797 704 ntAPPRIS P5 TSL 1 (best) BASIC9.65□□□□□ -0.86
Ccdc60Q8C4J0 Gm43346-201ENSMUST00000198290 685 ntTSL 2 BASIC9.65□□□□□ -0.86
Ccdc60Q8C4J0 Spink8-202ENSMUST00000198988 768 ntAPPRIS P2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Ccdc60Q8C4J0 Gm9497-201ENSMUST00000199908 538 ntBASIC9.65□□□□□ -0.86
Ccdc60Q8C4J0 AC134859.1-201ENSMUST00000214085 721 ntTSL 3 BASIC9.65□□□□□ -0.86
Ccdc60Q8C4J0 Cldn10-202ENSMUST00000071546 1031 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Ccdc60Q8C4J0 Gm6807-201ENSMUST00000077435 888 ntBASIC9.65□□□□□ -0.86
Ccdc60Q8C4J0 Rfwd3-201ENSMUST00000038739 4443 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Ccdc60Q8C4J0 Crnn-203ENSMUST00000195515 1863 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
Ccdc60Q8C4J0 Gm37426-201ENSMUST00000195241 2470 ntBASIC9.65□□□□□ -0.86
Ccdc60Q8C4J0 Trim40-201ENSMUST00000087158 2117 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.86
Ccdc60Q8C4J0 4930447M23Rik-202ENSMUST00000141289 1483 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
Ccdc60Q8C4J0 Ulk4-209ENSMUST00000171923 4103 ntAPPRIS P2 TSL 5 BASIC9.65□□□□□ -0.87
Ccdc60Q8C4J0 Fam114a1-201ENSMUST00000031080 2938 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Ccdc60Q8C4J0 Strbp-202ENSMUST00000072186 3144 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Ccdc60Q8C4J0 Sprr2a1-201ENSMUST00000074449 3003 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Ccdc60Q8C4J0 Gm44745-201ENSMUST00000206563 2723 ntBASIC9.64□□□□□ -0.87
Ccdc60Q8C4J0 Gm28867-201ENSMUST00000190194 2166 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Ccdc60Q8C4J0 Smarcal1-207ENSMUST00000152225 2994 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Ccdc60Q8C4J0 Odf2-202ENSMUST00000046571 3959 ntAPPRIS ALT2 TSL 2 BASIC9.64□□□□□ -0.87
Ccdc60Q8C4J0 Celf5-204ENSMUST00000120856 3861 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Ccdc60Q8C4J0 Gm42692-201ENSMUST00000199482 2833 ntBASIC9.64□□□□□ -0.87
Ccdc60Q8C4J0 Gm13427-201ENSMUST00000154296 794 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Ccdc60Q8C4J0 Gm23007-201ENSMUST00000158951 177 ntBASIC9.64□□□□□ -0.87
Ccdc60Q8C4J0 Mir7029-201ENSMUST00000184777 61 ntBASIC9.64□□□□□ -0.87
Ccdc60Q8C4J0 1700016L21Rik-202ENSMUST00000189139 629 ntTSL 3 BASIC9.64□□□□□ -0.87
Ccdc60Q8C4J0 AF067063-202ENSMUST00000195234 885 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Ccdc60Q8C4J0 Gm43590-201ENSMUST00000195987 387 ntBASIC9.64□□□□□ -0.87
Ccdc60Q8C4J0 A330076H08Rik-203ENSMUST00000208822 1164 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Ccdc60Q8C4J0 Gm45391-201ENSMUST00000211563 576 ntTSL 5 BASIC9.64□□□□□ -0.87
Ccdc60Q8C4J0 Tmem156-206ENSMUST00000212640 1271 ntTSL 5 BASIC9.64□□□□□ -0.87
Ccdc60Q8C4J0 Gm32515-201ENSMUST00000219396 350 ntTSL 2 BASIC9.64□□□□□ -0.87
Ccdc60Q8C4J0 Rps6-ps1-201ENSMUST00000074205 750 ntBASIC9.64□□□□□ -0.87
Ccdc60Q8C4J0 Olfr224-201ENSMUST00000081102 945 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
Ccdc60Q8C4J0 Snora9-201ENSMUST00000082579 133 ntBASIC9.64□□□□□ -0.87
Ccdc60Q8C4J0 Gm25926-201ENSMUST00000082899 160 ntBASIC9.64□□□□□ -0.87
Ccdc60Q8C4J0 Rps12-ps3-201ENSMUST00000086764 494 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 91 ms