Protein–RNA interactions for Protein: Q6PEE2

Ctif, CBP80/20-dependent translation initiation factor, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtifQ6PEE2 Phf6-202ENSMUST00000101587 3639 ntTSL 2 BASIC8.12□□□□□ -1.11
CtifQ6PEE2 Gm8212-201ENSMUST00000166350 1404 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
CtifQ6PEE2 Frmd7-201ENSMUST00000060650 2112 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
CtifQ6PEE2 Slc26a5-202ENSMUST00000115176 2768 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
CtifQ6PEE2 Nif3l1-201ENSMUST00000087521 3769 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
CtifQ6PEE2 Nat8f4-201ENSMUST00000095757 3019 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
CtifQ6PEE2 Gbp3-202ENSMUST00000106221 2682 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
CtifQ6PEE2 Gria3-209ENSMUST00000165288 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC8.12□□□□□ -1.11
CtifQ6PEE2 Spin2c-201ENSMUST00000049999 1309 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
CtifQ6PEE2 Prelp-201ENSMUST00000048432 3615 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
CtifQ6PEE2 Zfp37-204ENSMUST00000220873 1985 ntAPPRIS ALT2 TSL 5 BASIC8.12□□□□□ -1.11
CtifQ6PEE2 Gngt2-202ENSMUST00000100532 573 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
CtifQ6PEE2 Hmgn2-202ENSMUST00000102552 676 ntAPPRIS P2 TSL 2 BASIC8.12□□□□□ -1.11
CtifQ6PEE2 Gm14410-201ENSMUST00000108964 912 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
CtifQ6PEE2 Gm13137-201ENSMUST00000118035 345 ntBASIC8.12□□□□□ -1.11
CtifQ6PEE2 Gm12098-201ENSMUST00000118277 508 ntBASIC8.12□□□□□ -1.11
CtifQ6PEE2 Rps8-ps2-201ENSMUST00000118709 624 ntBASIC8.12□□□□□ -1.11
CtifQ6PEE2 Gm15504-201ENSMUST00000119674 265 ntBASIC8.12□□□□□ -1.11
CtifQ6PEE2 Rps10-ps4-201ENSMUST00000120308 492 ntBASIC8.12□□□□□ -1.11
CtifQ6PEE2 Gm14438-201ENSMUST00000121572 624 ntBASIC8.12□□□□□ -1.11
CtifQ6PEE2 Gm13360-201ENSMUST00000121607 799 ntBASIC8.12□□□□□ -1.11
CtifQ6PEE2 1700061H18Rik-201ENSMUST00000139488 634 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
CtifQ6PEE2 Gm21139-201ENSMUST00000186594 877 ntBASIC8.12□□□□□ -1.11
CtifQ6PEE2 Scgb1b12-201ENSMUST00000188355 417 ntAPPRIS P1 TSL 3 BASIC8.12□□□□□ -1.11
CtifQ6PEE2 1700065J18Rik-202ENSMUST00000190576 387 ntTSL 3 BASIC8.12□□□□□ -1.11
CtifQ6PEE2 Gm43743-201ENSMUST00000197898 697 ntBASIC8.12□□□□□ -1.11
CtifQ6PEE2 Gm43212-201ENSMUST00000198208 394 ntBASIC8.12□□□□□ -1.11
CtifQ6PEE2 Gm30708-201ENSMUST00000202183 312 ntBASIC8.12□□□□□ -1.11
CtifQ6PEE2 Gm34597-201ENSMUST00000211189 633 ntTSL 5 BASIC8.12□□□□□ -1.11
CtifQ6PEE2 Gm45462-201ENSMUST00000211267 792 ntTSL 5 BASIC8.12□□□□□ -1.11
CtifQ6PEE2 AC137127.2-201ENSMUST00000215086 935 ntTSL 5 BASIC8.12□□□□□ -1.11
CtifQ6PEE2 AC132954.2-201ENSMUST00000222400 403 ntBASIC8.12□□□□□ -1.11
CtifQ6PEE2 CT025630.3-201ENSMUST00000228798 835 ntBASIC8.12□□□□□ -1.11
CtifQ6PEE2 Gm7936-201ENSMUST00000069529 375 ntBASIC8.12□□□□□ -1.11
CtifQ6PEE2 Olfr1424-201ENSMUST00000087830 942 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
CtifQ6PEE2 Gm5169-201ENSMUST00000096469 768 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
CtifQ6PEE2 Gm4952-201ENSMUST00000092931 2212 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
CtifQ6PEE2 Homer1-201ENSMUST00000060490 2765 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
CtifQ6PEE2 Olfr90-203ENSMUST00000215195 3060 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
CtifQ6PEE2 Gm26766-201ENSMUST00000181411 3677 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
CtifQ6PEE2 Ptgfr-202ENSMUST00000106126 1535 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
CtifQ6PEE2 Ank3-230ENSMUST00000182795 3557 ntTSL 5 BASIC8.12□□□□□ -1.11
CtifQ6PEE2 Gm5524-201ENSMUST00000185409 2002 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
CtifQ6PEE2 Gm8878-201ENSMUST00000173552 1725 ntBASIC8.12□□□□□ -1.11
CtifQ6PEE2 Olfr224-203ENSMUST00000216758 1742 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
CtifQ6PEE2 AC133207.1-201ENSMUST00000218960 1431 ntTSL 5 BASIC8.12□□□□□ -1.11
CtifQ6PEE2 CT030170.4-203ENSMUST00000221062 1403 ntTSL 5 BASIC8.12□□□□□ -1.11
CtifQ6PEE2 Zfp106-201ENSMUST00000055241 9085 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
CtifQ6PEE2 Gm10650-202ENSMUST00000196581 1969 ntBASIC8.11□□□□□ -1.11
CtifQ6PEE2 Gm38359-201ENSMUST00000191884 2225 ntBASIC8.11□□□□□ -1.11
CtifQ6PEE2 Fto-202ENSMUST00000125471 3887 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
CtifQ6PEE2 Gm5975-201ENSMUST00000185256 1399 ntBASIC8.11□□□□□ -1.11
CtifQ6PEE2 Cep290-210ENSMUST00000220346 8211 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
CtifQ6PEE2 Hook3-201ENSMUST00000037182 12836 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
CtifQ6PEE2 Erc1-210ENSMUST00000184864 5428 ntAPPRIS ALT1 TSL 5 BASIC8.11□□□□□ -1.11
CtifQ6PEE2 Abcc9-202ENSMUST00000087527 6213 ntAPPRIS P5 TSL 1 (best) BASIC8.11□□□□□ -1.11
CtifQ6PEE2 Vmn1r184-205ENSMUST00000227790 4334 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
CtifQ6PEE2 Dnah9-201ENSMUST00000080665 13798 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
CtifQ6PEE2 Ttc37-201ENSMUST00000091466 5381 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
CtifQ6PEE2 Gm38276-201ENSMUST00000192446 1343 ntBASIC8.11□□□□□ -1.11
CtifQ6PEE2 Frem1-208ENSMUST00000170248 9527 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
CtifQ6PEE2 Amot-201ENSMUST00000112835 6519 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
CtifQ6PEE2 Stra6l-201ENSMUST00000030011 3606 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.11
CtifQ6PEE2 Gm5903-201ENSMUST00000121836 2325 ntBASIC8.11□□□□□ -1.11
CtifQ6PEE2 Npm1-203ENSMUST00000101375 966 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
CtifQ6PEE2 n-R5s102-201ENSMUST00000101990 119 ntBASIC8.11□□□□□ -1.11
CtifQ6PEE2 Igkv4-81-201ENSMUST00000103340 290 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
CtifQ6PEE2 Gm12838-201ENSMUST00000116278 325 ntBASIC8.11□□□□□ -1.11
CtifQ6PEE2 Gm11987-201ENSMUST00000118524 381 ntBASIC8.11□□□□□ -1.11
CtifQ6PEE2 Gm12024-201ENSMUST00000118819 1253 ntBASIC8.11□□□□□ -1.11
CtifQ6PEE2 Olfr621-ps1-201ENSMUST00000119741 938 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
CtifQ6PEE2 Mup-ps24-201ENSMUST00000119939 286 ntBASIC8.11□□□□□ -1.11
CtifQ6PEE2 Gm16158-201ENSMUST00000123509 785 ntTSL 5 BASIC8.11□□□□□ -1.11
CtifQ6PEE2 Bloodlinc-201ENSMUST00000126237 679 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
CtifQ6PEE2 A630023P12Rik-201ENSMUST00000129007 1221 ntTSL 2 BASIC8.11□□□□□ -1.11
CtifQ6PEE2 Gm5970-201ENSMUST00000131638 1216 ntBASIC8.11□□□□□ -1.11
CtifQ6PEE2 A330043C09Rik-201ENSMUST00000139823 1009 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
CtifQ6PEE2 Gm20492-201ENSMUST00000172591 286 ntTSL 3 BASIC8.11□□□□□ -1.11
CtifQ6PEE2 Gm20511-201ENSMUST00000174079 456 ntTSL 3 BASIC8.11□□□□□ -1.11
CtifQ6PEE2 Gm3159-203ENSMUST00000177764 618 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
CtifQ6PEE2 n-R5s101-201ENSMUST00000177910 119 ntBASIC8.11□□□□□ -1.11
CtifQ6PEE2 n-R5s114-201ENSMUST00000178297 119 ntBASIC8.11□□□□□ -1.11
CtifQ6PEE2 n-R5s119-201ENSMUST00000178861 119 ntBASIC8.11□□□□□ -1.11
CtifQ6PEE2 n-R5s127-201ENSMUST00000179185 119 ntBASIC8.11□□□□□ -1.11
CtifQ6PEE2 Gm3591-202ENSMUST00000179312 396 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
CtifQ6PEE2 n-R5s129-201ENSMUST00000180122 119 ntBASIC8.11□□□□□ -1.11
CtifQ6PEE2 n-R5s131-201ENSMUST00000180280 119 ntBASIC8.11□□□□□ -1.11
CtifQ6PEE2 Peak1os-201ENSMUST00000181444 1264 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
CtifQ6PEE2 Calm5-201ENSMUST00000183198 589 ntBASIC8.11□□□□□ -1.11
CtifQ6PEE2 Gm29050-202ENSMUST00000190865 502 ntTSL 2 BASIC8.11□□□□□ -1.11
CtifQ6PEE2 Gm43782-201ENSMUST00000202790 229 ntTSL 3 BASIC8.11□□□□□ -1.11
CtifQ6PEE2 Tial1-214ENSMUST00000205835 562 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
CtifQ6PEE2 AC161117.2-201ENSMUST00000221908 451 ntBASIC8.11□□□□□ -1.11
CtifQ6PEE2 AC134462.1-201ENSMUST00000223047 552 ntTSL 2 BASIC8.11□□□□□ -1.11
CtifQ6PEE2 Ly6f-201ENSMUST00000023247 877 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
CtifQ6PEE2 Ccdc54-201ENSMUST00000062439 1296 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
CtifQ6PEE2 Sat2-201ENSMUST00000092969 800 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
CtifQ6PEE2 Ighv1-13-201ENSMUST00000095364 294 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
CtifQ6PEE2 Ncapg-201ENSMUST00000117396 3703 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
CtifQ6PEE2 Gm34297-201ENSMUST00000218569 1980 ntTSL 5 BASIC8.11□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 72.8 ms