Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Ttc9c-202ENSMUST00000096751 3509 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
SgcaP82350 Ccl9-201ENSMUST00000019266 3006 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
SgcaP82350 Fancd2os-201ENSMUST00000035870 1358 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
SgcaP82350 Nr1h5-203ENSMUST00000196983 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.39
SgcaP82350 Trim40-201ENSMUST00000087158 2117 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.39
SgcaP82350 Gm39139-202ENSMUST00000212621 5878 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
SgcaP82350 Lpar6-201ENSMUST00000044405 5400 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
SgcaP82350 AC158938.1-201ENSMUST00000225372 6720 ntBASIC6.39□□□□□ -1.39
SgcaP82350 A430110C17Rik-201ENSMUST00000195666 4348 ntBASIC6.39□□□□□ -1.39
SgcaP82350 Lrtm1-201ENSMUST00000055662 7321 ntAPPRIS P2 TSL 1 (best) BASIC6.39□□□□□ -1.39
SgcaP82350 Olfr318-203ENSMUST00000214728 4552 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
SgcaP82350 Mapk10-205ENSMUST00000128869 2518 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
SgcaP82350 Olfr430-203ENSMUST00000214390 3300 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
SgcaP82350 Strada-203ENSMUST00000106867 3386 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
SgcaP82350 Gm11855-201ENSMUST00000121562 1869 ntBASIC6.39□□□□□ -1.39
SgcaP82350 Ndrg3-201ENSMUST00000069600 2612 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
SgcaP82350 Nckap5-204ENSMUST00000112583 7212 ntAPPRIS P3 TSL 5 BASIC6.39□□□□□ -1.39
SgcaP82350 Tmprss11a-201ENSMUST00000101073 2657 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
SgcaP82350 4732465J04Rik-202ENSMUST00000187483 2744 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
SgcaP82350 Dcx-201ENSMUST00000033642 9074 ntAPPRIS ALT1 TSL 1 (best) BASIC6.39□□□□□ -1.39
SgcaP82350 Lrp1-201ENSMUST00000049149 14888 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
SgcaP82350 Parn-201ENSMUST00000058884 2902 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
SgcaP82350 Trip12-201ENSMUST00000027421 9632 ntAPPRIS P2 TSL 5 BASIC6.39□□□□□ -1.39
SgcaP82350 Gngt2-202ENSMUST00000100532 573 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
SgcaP82350 Gm23659-201ENSMUST00000102245 110 ntBASIC6.39□□□□□ -1.39
SgcaP82350 Igkv14-130-201ENSMUST00000103307 350 ntAPPRIS ALT2 BASIC6.39□□□□□ -1.39
SgcaP82350 Cenpx-204ENSMUST00000106155 700 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
SgcaP82350 Gm9095-201ENSMUST00000117607 881 ntBASIC6.39□□□□□ -1.39
SgcaP82350 Gm12206-201ENSMUST00000119795 601 ntBASIC6.39□□□□□ -1.39
SgcaP82350 Gm15028-201ENSMUST00000120295 370 ntBASIC6.39□□□□□ -1.39
SgcaP82350 Gm9097-201ENSMUST00000120514 880 ntBASIC6.39□□□□□ -1.39
SgcaP82350 Crem-209ENSMUST00000129435 1160 ntTSL 5 BASIC6.39□□□□□ -1.39
SgcaP82350 Gm11672-201ENSMUST00000140380 645 ntTSL 5 BASIC6.39□□□□□ -1.39
SgcaP82350 Gm12962-202ENSMUST00000144212 691 ntTSL 2 BASIC6.39□□□□□ -1.39
SgcaP82350 Gm14376-201ENSMUST00000145297 297 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
SgcaP82350 Gm12996-201ENSMUST00000151670 636 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
SgcaP82350 Gm24004-201ENSMUST00000158460 178 ntBASIC6.39□□□□□ -1.39
SgcaP82350 Gm23021-201ENSMUST00000158765 169 ntBASIC6.39□□□□□ -1.39
SgcaP82350 Gm16541-201ENSMUST00000160992 614 ntTSL 3 BASIC6.39□□□□□ -1.39
SgcaP82350 Gm16226-203ENSMUST00000161197 395 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
SgcaP82350 Gm17572-201ENSMUST00000171455 420 ntBASIC6.39□□□□□ -1.39
SgcaP82350 Btnl5-ps-202ENSMUST00000173333 461 ntTSL 2 BASIC6.39□□□□□ -1.39
SgcaP82350 Olfr10-201ENSMUST00000187570 942 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
SgcaP82350 Arhgap26-218ENSMUST00000187912 312 ntTSL 5 BASIC6.39□□□□□ -1.39
SgcaP82350 Gm8704-201ENSMUST00000197181 435 ntBASIC6.39□□□□□ -1.39
SgcaP82350 1700081B01Rik-202ENSMUST00000197543 648 ntTSL 3 BASIC6.39□□□□□ -1.39
SgcaP82350 Gm21461-201ENSMUST00000200382 863 ntBASIC6.39□□□□□ -1.39
SgcaP82350 Gm3922-201ENSMUST00000200519 435 ntBASIC6.39□□□□□ -1.39
SgcaP82350 Gm44442-201ENSMUST00000204298 422 ntTSL 3 BASIC6.39□□□□□ -1.39
SgcaP82350 Gm5037-201ENSMUST00000205327 618 ntBASIC6.39□□□□□ -1.39
SgcaP82350 Gm44508-201ENSMUST00000206943 1157 ntBASIC6.39□□□□□ -1.39
SgcaP82350 Gm8489-201ENSMUST00000209876 1152 ntBASIC6.39□□□□□ -1.39
SgcaP82350 Rps11-204ENSMUST00000211725 493 ntTSL 5 BASIC6.39□□□□□ -1.39
SgcaP82350 Gm31698-201ENSMUST00000214227 430 ntTSL 2 BASIC6.39□□□□□ -1.39
SgcaP82350 AC154904.1-201ENSMUST00000219510 312 ntBASIC6.39□□□□□ -1.39
SgcaP82350 AC134462.1-201ENSMUST00000223047 552 ntTSL 2 BASIC6.39□□□□□ -1.39
SgcaP82350 Slitrk2-201ENSMUST00000036043 2992 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
SgcaP82350 Cenpx-202ENSMUST00000055424 606 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
SgcaP82350 Prcp-201ENSMUST00000076052 2967 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
SgcaP82350 Olfr412-201ENSMUST00000077794 939 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
SgcaP82350 Snora74a-201ENSMUST00000083715 196 ntBASIC6.39□□□□□ -1.39
SgcaP82350 Mir484-201ENSMUST00000093566 67 ntBASIC6.39□□□□□ -1.39
SgcaP82350 Olfr1012-201ENSMUST00000099916 936 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
SgcaP82350 Olfr1175-ps-201ENSMUST00000214207 5552 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
SgcaP82350 Gm20547-202ENSMUST00000146299 3893 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
SgcaP82350 Gm28587-201ENSMUST00000187181 3005 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
SgcaP82350 Stt3a-201ENSMUST00000120381 5867 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
SgcaP82350 Ncoa4-202ENSMUST00000163336 4065 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
SgcaP82350 Gm26629-201ENSMUST00000180848 2276 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
SgcaP82350 Gm30655-201ENSMUST00000220498 1383 ntTSL 5 BASIC6.39□□□□□ -1.39
SgcaP82350 Apool-201ENSMUST00000026599 1359 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
SgcaP82350 Utp20-201ENSMUST00000004470 8821 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
SgcaP82350 Tbxas1-206ENSMUST00000162521 1427 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
SgcaP82350 Aph1c-202ENSMUST00000169282 5205 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
SgcaP82350 CT025566.1-202ENSMUST00000224800 2511 ntBASIC6.39□□□□□ -1.39
SgcaP82350 Lgals9-202ENSMUST00000108268 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
SgcaP82350 Pja2-204ENSMUST00000172818 4740 ntAPPRIS P4 TSL 1 (best) BASIC6.39□□□□□ -1.39
SgcaP82350 Gm45210-201ENSMUST00000206401 1577 ntBASIC6.39□□□□□ -1.39
SgcaP82350 Mstn-201ENSMUST00000027269 2705 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
SgcaP82350 Gm14144-201ENSMUST00000128602 1721 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
SgcaP82350 4930442J19Rik-202ENSMUST00000157058 1721 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
SgcaP82350 Prkacb-203ENSMUST00000106137 4061 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
SgcaP82350 Kdm5d-201ENSMUST00000055032 7974 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
SgcaP82350 Olfr745-202ENSMUST00000213127 1930 ntTSL 5 BASIC6.38□□□□□ -1.39
SgcaP82350 Olfr1391-202ENSMUST00000215671 3235 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
SgcaP82350 Atp1a4-201ENSMUST00000111243 3470 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
SgcaP82350 Gm38416-201ENSMUST00000209648 3565 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
SgcaP82350 Gm37685-201ENSMUST00000193507 2177 ntBASIC6.38□□□□□ -1.39
SgcaP82350 Fam193a-201ENSMUST00000094867 3696 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
SgcaP82350 Pglyrp4-203ENSMUST00000169698 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
SgcaP82350 Zmynd8-202ENSMUST00000088113 3757 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
SgcaP82350 Tnik-215ENSMUST00000162777 3894 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
SgcaP82350 Zfp58-204ENSMUST00000171518 2300 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
SgcaP82350 Clasp1-202ENSMUST00000070989 7767 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
SgcaP82350 Slc7a2-201ENSMUST00000057784 7910 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
SgcaP82350 Gm15462-201ENSMUST00000133653 4580 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
SgcaP82350 Gm45843-201ENSMUST00000212317 4597 ntTSL 5 BASIC6.38□□□□□ -1.39
SgcaP82350 Cep120-201ENSMUST00000049811 4553 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
SgcaP82350 Gm17354-201ENSMUST00000170933 3039 ntTSL 5 BASIC6.38□□□□□ -1.39
SgcaP82350 Gm28497-201ENSMUST00000189646 3029 ntBASIC6.38□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 60.6 ms