Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Zfyve9-201ENSMUST00000042185 2170 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Hmgb1P63158 Gm43728-201ENSMUST00000198817 2622 ntBASIC8.73□□□□□ -1.01
Hmgb1P63158 Gm7134-201ENSMUST00000122296 2406 ntBASIC8.73□□□□□ -1.01
Hmgb1P63158 Arhgap17-201ENSMUST00000098060 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC8.73□□□□□ -1.01
Hmgb1P63158 Dab2-204ENSMUST00000110664 4450 ntAPPRIS ALT2 TSL 5 BASIC8.73□□□□□ -1.01
Hmgb1P63158 Vmn1r44-213ENSMUST00000228700 2004 ntAPPRIS P1 BASIC8.73□□□□□ -1.01
Hmgb1P63158 Gm43099-201ENSMUST00000198943 5241 ntBASIC8.73□□□□□ -1.01
Hmgb1P63158 Gm44624-201ENSMUST00000208700 2278 ntBASIC8.73□□□□□ -1.01
Hmgb1P63158 3110043O21Rik-201ENSMUST00000084724 3413 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Hmgb1P63158 AC132384.4-201ENSMUST00000220343 1397 ntBASIC8.73□□□□□ -1.01
Hmgb1P63158 Uba1y-ps2-201ENSMUST00000190871 2544 ntBASIC8.73□□□□□ -1.01
Hmgb1P63158 Hdlbp-202ENSMUST00000170883 6231 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Hmgb1P63158 Apobec3-209ENSMUST00000176325 2765 ntAPPRIS ALT2 TSL 1 (best) BASIC8.73□□□□□ -1.01
Hmgb1P63158 Entpd3-201ENSMUST00000047687 3453 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Hmgb1P63158 P2ry14-201ENSMUST00000065220 1672 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Hmgb1P63158 Gm37647-201ENSMUST00000194556 3143 ntBASIC8.72□□□□□ -1.01
Hmgb1P63158 Gm44165-201ENSMUST00000203093 1469 ntBASIC8.72□□□□□ -1.01
Hmgb1P63158 Gm26563-201ENSMUST00000181003 1704 ntTSL 5 BASIC8.72□□□□□ -1.01
Hmgb1P63158 Gm5118-201ENSMUST00000184692 2203 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Hmgb1P63158 Ankef1-210ENSMUST00000180246 2726 ntAPPRIS P1 TSL 5 BASIC8.72□□□□□ -1.01
Hmgb1P63158 Gm37022-201ENSMUST00000192517 2254 ntBASIC8.72□□□□□ -1.01
Hmgb1P63158 Efcab9-202ENSMUST00000109377 615 ntAPPRIS ALT2 TSL 3 BASIC8.72□□□□□ -1.01
Hmgb1P63158 Gm13921-201ENSMUST00000119411 463 ntBASIC8.72□□□□□ -1.01
Hmgb1P63158 Gm11955-201ENSMUST00000119801 470 ntBASIC8.72□□□□□ -1.01
Hmgb1P63158 Gm14528-201ENSMUST00000120615 231 ntBASIC8.72□□□□□ -1.01
Hmgb1P63158 Gm13586-201ENSMUST00000121784 464 ntBASIC8.72□□□□□ -1.01
Hmgb1P63158 A930104D05Rik-201ENSMUST00000128601 939 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Hmgb1P63158 Bnip1-206ENSMUST00000135824 629 ntTSL 5 BASIC8.72□□□□□ -1.01
Hmgb1P63158 Rpl29-203ENSMUST00000150576 733 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Hmgb1P63158 Ntpcr-208ENSMUST00000152189 822 ntTSL 3 BASIC8.72□□□□□ -1.01
Hmgb1P63158 Gm7281-201ENSMUST00000160010 543 ntBASIC8.72□□□□□ -1.01
Hmgb1P63158 Olfr270-202ENSMUST00000172257 939 ntAPPRIS P2 BASIC8.72□□□□□ -1.01
Hmgb1P63158 Gm2058-201ENSMUST00000178791 560 ntBASIC8.72□□□□□ -1.01
Hmgb1P63158 Gm27153-201ENSMUST00000184492 407 ntTSL 2 BASIC8.72□□□□□ -1.01
Hmgb1P63158 Gm28980-201ENSMUST00000187877 219 ntBASIC8.72□□□□□ -1.01
Hmgb1P63158 Gm28548-201ENSMUST00000191599 409 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Hmgb1P63158 Gm43192-201ENSMUST00000198002 637 ntTSL 3 BASIC8.72□□□□□ -1.01
Hmgb1P63158 Gm43840-201ENSMUST00000199444 484 ntBASIC8.72□□□□□ -1.01
Hmgb1P63158 Gm3604-203ENSMUST00000202194 736 ntTSL 3 BASIC8.72□□□□□ -1.01
Hmgb1P63158 Gm17995-201ENSMUST00000209266 530 ntBASIC8.72□□□□□ -1.01
Hmgb1P63158 Gm45875-201ENSMUST00000212178 781 ntTSL 3 BASIC8.72□□□□□ -1.01
Hmgb1P63158 Gm7850-201ENSMUST00000212909 712 ntBASIC8.72□□□□□ -1.01
Hmgb1P63158 Gm46313-201ENSMUST00000220463 547 ntBASIC8.72□□□□□ -1.01
Hmgb1P63158 AC241621.1-201ENSMUST00000224499 430 ntBASIC8.72□□□□□ -1.01
Hmgb1P63158 BC048671-201ENSMUST00000054799 1212 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Hmgb1P63158 Olfr518-201ENSMUST00000059617 1002 ntAPPRIS P1 BASIC8.72□□□□□ -1.01
Hmgb1P63158 Mill2-202ENSMUST00000072415 1075 ntAPPRIS ALT2 TSL 1 (best) BASIC8.72□□□□□ -1.01
Hmgb1P63158 Tdgf1-ps2-201ENSMUST00000074412 505 ntBASIC8.72□□□□□ -1.01
Hmgb1P63158 Olfr514-201ENSMUST00000084754 933 ntAPPRIS P1 BASIC8.72□□□□□ -1.01
Hmgb1P63158 Olfr2-201ENSMUST00000094109 1250 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Hmgb1P63158 AC158605.4-201ENSMUST00000219013 3361 ntBASIC8.72□□□□□ -1.01
Hmgb1P63158 Ctps2-201ENSMUST00000033727 3353 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Hmgb1P63158 Gria3-209ENSMUST00000165288 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Hmgb1P63158 Elavl4-207ENSMUST00000106603 3761 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Hmgb1P63158 Ttc29-201ENSMUST00000049395 2450 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Hmgb1P63158 Sox5-214ENSMUST00000170367 7184 ntTSL 5 BASIC8.72□□□□□ -1.01
Hmgb1P63158 Adgrl2-202ENSMUST00000106128 6052 ntAPPRIS ALT2 TSL 5 BASIC8.72□□□□□ -1.01
Hmgb1P63158 Clca3a2-201ENSMUST00000029929 3654 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Hmgb1P63158 Gm39526-201ENSMUST00000208925 1413 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
Hmgb1P63158 9230106D20Rik-201ENSMUST00000052806 1406 ntTSL 5 BASIC8.71□□□□□ -1.01
Hmgb1P63158 A730036I17Rik-201ENSMUST00000143346 3431 ntTSL 2 BASIC8.71□□□□□ -1.01
Hmgb1P63158 Musk-203ENSMUST00000098057 3422 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
Hmgb1P63158 Gm26843-201ENSMUST00000212304 2859 ntTSL 5 BASIC8.71□□□□□ -1.01
Hmgb1P63158 Gm4951-201ENSMUST00000031549 2645 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
Hmgb1P63158 Vmn1r220-203ENSMUST00000227679 7868 ntAPPRIS P1 BASIC8.71□□□□□ -1.01
Hmgb1P63158 Vmn1r220-206ENSMUST00000228854 7854 ntAPPRIS P1 BASIC8.71□□□□□ -1.01
Hmgb1P63158 Vmn1r44-212ENSMUST00000228183 1838 ntBASIC8.71□□□□□ -1.01
Hmgb1P63158 Gm45464-201ENSMUST00000210728 2844 ntTSL 5 BASIC8.71□□□□□ -1.02
Hmgb1P63158 Gm42678-201ENSMUST00000197163 2221 ntBASIC8.71□□□□□ -1.02
Hmgb1P63158 Olfr329-ps-202ENSMUST00000108823 1060 ntAPPRIS P2 BASIC8.71□□□□□ -1.02
Hmgb1P63158 Ap5s1-202ENSMUST00000110206 703 ntTSL 3 BASIC8.71□□□□□ -1.02
Hmgb1P63158 Gm12460-201ENSMUST00000117147 357 ntBASIC8.71□□□□□ -1.02
Hmgb1P63158 Gm11220-201ENSMUST00000118844 475 ntBASIC8.71□□□□□ -1.02
Hmgb1P63158 Rps25-ps1-201ENSMUST00000119876 378 ntBASIC8.71□□□□□ -1.02
Hmgb1P63158 Gm6798-201ENSMUST00000119961 360 ntBASIC8.71□□□□□ -1.02
Hmgb1P63158 Gm12222-201ENSMUST00000121368 260 ntBASIC8.71□□□□□ -1.02
Hmgb1P63158 Gm13536-201ENSMUST00000132913 766 ntTSL 2 BASIC8.71□□□□□ -1.02
Hmgb1P63158 Gm13872-203ENSMUST00000147082 657 ntTSL 3 BASIC8.71□□□□□ -1.02
Hmgb1P63158 Ttc9c-204ENSMUST00000153281 1192 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Hmgb1P63158 Gm11840-201ENSMUST00000156947 696 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Hmgb1P63158 A530032D15Rik-203ENSMUST00000161724 789 ntAPPRIS ALT2 TSL 5 BASIC8.71□□□□□ -1.02
Hmgb1P63158 Gm22132-201ENSMUST00000175316 100 ntBASIC8.71□□□□□ -1.02
Hmgb1P63158 Gm498-203ENSMUST00000179036 990 ntTSL 5 BASIC8.71□□□□□ -1.02
Hmgb1P63158 Gm19791-201ENSMUST00000180398 859 ntBASIC8.71□□□□□ -1.02
Hmgb1P63158 Gm26832-201ENSMUST00000181456 1282 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Hmgb1P63158 2810429I04Rik-204ENSMUST00000185835 923 ntTSL 3 BASIC8.71□□□□□ -1.02
Hmgb1P63158 1700003C15Rik-202ENSMUST00000188236 710 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Hmgb1P63158 H2al1a-201ENSMUST00000188439 501 ntAPPRIS P1 BASIC8.71□□□□□ -1.02
Hmgb1P63158 Gm7343-201ENSMUST00000194510 1061 ntBASIC8.71□□□□□ -1.02
Hmgb1P63158 Gm4780-201ENSMUST00000213206 1242 ntBASIC8.71□□□□□ -1.02
Hmgb1P63158 Gm35501-202ENSMUST00000215101 459 ntTSL 3 BASIC8.71□□□□□ -1.02
Hmgb1P63158 Ormdl2-202ENSMUST00000217685 666 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Hmgb1P63158 AC155929.4-201ENSMUST00000218493 491 ntTSL 3 BASIC8.71□□□□□ -1.02
Hmgb1P63158 AC166256.1-201ENSMUST00000219081 1271 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Hmgb1P63158 AC207128.2-202ENSMUST00000224010 808 ntBASIC8.71□□□□□ -1.02
Hmgb1P63158 Ppp1r1c-201ENSMUST00000040863 629 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Hmgb1P63158 Tas2r109-201ENSMUST00000067539 951 ntAPPRIS P1 BASIC8.71□□□□□ -1.02
Hmgb1P63158 Fabp3-ps1-201ENSMUST00000070435 402 ntBASIC8.71□□□□□ -1.02
Hmgb1P63158 6330409D20Rik-201ENSMUST00000009695 1119 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Hmgb1P63158 Gm21541-201ENSMUST00000098128 870 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Retrieved 100 of 76,532 protein–RNA pairs in 63.2 ms