Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Nbr1-204ENSMUST00000107208 4344 ntAPPRIS ALT2 TSL 1 (best) BASIC7.77□□□□□ -1.17
HttP42859 Trav19-201ENSMUST00000103674 446 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
HttP42859 AF067063-201ENSMUST00000179455 590 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
HttP42859 Gm29813-201ENSMUST00000195856 447 ntBASIC7.77□□□□□ -1.17
HttP42859 Gm42707-202ENSMUST00000196668 618 ntTSL 3 BASIC7.77□□□□□ -1.17
HttP42859 Gm43910-201ENSMUST00000204561 3241 ntBASIC7.77□□□□□ -1.17
HttP42859 Gm45026-201ENSMUST00000205292 833 ntBASIC7.77□□□□□ -1.17
HttP42859 Gm4972-201ENSMUST00000211108 1254 ntBASIC7.77□□□□□ -1.17
HttP42859 Gm30853-201ENSMUST00000218367 810 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
HttP42859 AC154806.1-203ENSMUST00000227370 1032 ntBASIC7.77□□□□□ -1.17
HttP42859 Gm13769-201ENSMUST00000077123 930 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
HttP42859 Abcb1a-201ENSMUST00000047753 4997 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
HttP42859 Cts7-201ENSMUST00000021892 1518 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
HttP42859 Dlgap5-201ENSMUST00000043296 2964 ntAPPRIS P2 TSL 1 (best) BASIC7.77□□□□□ -1.17
HttP42859 Tnfrsf11b-201ENSMUST00000079772 2818 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
HttP42859 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
HttP42859 Olfr20-202ENSMUST00000120137 2390 ntAPPRIS P1 TSL 2 BASIC7.77□□□□□ -1.17
HttP42859 Spata31d1b-201ENSMUST00000165133 4287 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
HttP42859 Gm23739-201ENSMUST00000102295 108 ntBASIC7.76□□□□□ -1.17
HttP42859 Gm12600-201ENSMUST00000146704 708 ntTSL 3 BASIC7.76□□□□□ -1.17
HttP42859 Gm12081-201ENSMUST00000152849 501 ntTSL 5 BASIC7.76□□□□□ -1.17
HttP42859 Gm22795-201ENSMUST00000157233 118 ntBASIC7.76□□□□□ -1.17
HttP42859 C030007H22Rik-201ENSMUST00000186258 591 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
HttP42859 Gm38237-201ENSMUST00000193366 376 ntBASIC7.76□□□□□ -1.17
HttP42859 Gm42673-201ENSMUST00000202676 337 ntBASIC7.76□□□□□ -1.17
HttP42859 Gm18040-201ENSMUST00000217922 827 ntBASIC7.76□□□□□ -1.17
HttP42859 AC127242.4-201ENSMUST00000221242 470 ntBASIC7.76□□□□□ -1.17
HttP42859 Wfdc13-201ENSMUST00000088260 1074 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
HttP42859 Zfp607a-201ENSMUST00000053722 2061 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
HttP42859 Ggta1-205ENSMUST00000113002 3391 ntAPPRIS ALT2 TSL 1 (best) BASIC7.76□□□□□ -1.17
HttP42859 Gm38277-201ENSMUST00000195172 1367 ntBASIC7.76□□□□□ -1.17
HttP42859 Birc5-202ENSMUST00000093906 3334 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
HttP42859 Gm37978-201ENSMUST00000194736 2915 ntBASIC7.76□□□□□ -1.17
HttP42859 Gpr155-204ENSMUST00000112044 4201 ntAPPRIS ALT2 TSL 5 BASIC7.76□□□□□ -1.17
HttP42859 Npc1l1-201ENSMUST00000004505 4467 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
HttP42859 Map4k4-209ENSMUST00000192509 3918 ntAPPRIS P3 TSL 2 BASIC7.76□□□□□ -1.17
HttP42859 Gm9030-201ENSMUST00000218405 2410 ntBASIC7.76□□□□□ -1.17
HttP42859 Gm9029-201ENSMUST00000219232 2410 ntBASIC7.76□□□□□ -1.17
HttP42859 Gm29571-201ENSMUST00000191547 1909 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
HttP42859 Mecomos-201ENSMUST00000125611 5510 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
HttP42859 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC7.76□□□□□ -1.17
HttP42859 Gm12593-201ENSMUST00000120981 743 ntBASIC7.76□□□□□ -1.17
HttP42859 Gm11335-201ENSMUST00000148743 1080 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
HttP42859 Gm25824-201ENSMUST00000157092 121 ntBASIC7.76□□□□□ -1.17
HttP42859 1600020E01Rik-208ENSMUST00000205028 329 ntTSL 5 BASIC7.76□□□□□ -1.17
HttP42859 Fxyd1-207ENSMUST00000205778 438 ntAPPRIS P1 TSL 3 BASIC7.76□□□□□ -1.17
HttP42859 Mobp-206ENSMUST00000214943 435 ntAPPRIS P1 TSL 3 BASIC7.76□□□□□ -1.17
HttP42859 Kcnmb1-201ENSMUST00000020362 4191 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
HttP42859 Gm38331-201ENSMUST00000195719 2671 ntBASIC7.76□□□□□ -1.17
HttP42859 Ttc33-201ENSMUST00000022751 1832 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
HttP42859 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC7.76□□□□□ -1.17
HttP42859 Olfr1510-202ENSMUST00000215928 1934 ntAPPRIS P1 TSL 3 BASIC7.76□□□□□ -1.17
HttP42859 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC7.76□□□□□ -1.17
HttP42859 Adam18-201ENSMUST00000033957 2361 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
HttP42859 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
HttP42859 Spty2d1-201ENSMUST00000061639 5223 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
HttP42859 Gm16204-201ENSMUST00000117864 1897 ntBASIC7.76□□□□□ -1.17
HttP42859 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC7.76□□□□□ -1.17
HttP42859 Slc5a6-205ENSMUST00000202520 3248 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
HttP42859 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
HttP42859 Gm35315-202ENSMUST00000210052 3523 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
HttP42859 Insl5-202ENSMUST00000106869 438 ntAPPRIS ALT2 TSL 1 (best) BASIC7.76□□□□□ -1.17
HttP42859 Gm15078-201ENSMUST00000118371 782 ntBASIC7.76□□□□□ -1.17
HttP42859 1700006E09Rik-203ENSMUST00000176722 608 ntTSL 3 BASIC7.76□□□□□ -1.17
HttP42859 Gm27207-201ENSMUST00000184995 878 ntTSL 3 BASIC7.76□□□□□ -1.17
HttP42859 Gm34574-201ENSMUST00000217795 1240 ntTSL 5 BASIC7.76□□□□□ -1.17
HttP42859 CT033778.1-201ENSMUST00000224767 767 ntBASIC7.76□□□□□ -1.17
HttP42859 Timeless-205ENSMUST00000105244 4341 ntAPPRIS ALT2 TSL 1 (best) BASIC7.76□□□□□ -1.17
HttP42859 Nrf1-206ENSMUST00000115204 2047 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
HttP42859 Cntn5-205ENSMUST00000179049 2682 ntTSL 5 BASIC7.76□□□□□ -1.17
HttP42859 Gpatch2-204ENSMUST00000110943 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC7.76□□□□□ -1.17
HttP42859 Rtp4-201ENSMUST00000038423 1573 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
HttP42859 Gm45807-201ENSMUST00000209142 2874 ntBASIC7.76□□□□□ -1.17
HttP42859 Gm5124-202ENSMUST00000132683 2083 ntBASIC7.75□□□□□ -1.17
HttP42859 Gm37949-201ENSMUST00000192808 2091 ntBASIC7.75□□□□□ -1.17
HttP42859 AC166574.5-201ENSMUST00000227438 1432 ntBASIC7.75□□□□□ -1.17
HttP42859 Slc2a9-203ENSMUST00000067886 3602 ntAPPRIS P4 TSL 1 (best) BASIC7.75□□□□□ -1.17
HttP42859 AC107763.1-202ENSMUST00000225021 2663 ntBASIC7.75□□□□□ -1.17
HttP42859 Ndrg3-203ENSMUST00000109558 4023 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
HttP42859 Nme8-201ENSMUST00000039340 1704 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
HttP42859 Gm44883-201ENSMUST00000206063 3258 ntBASIC7.75□□□□□ -1.17
HttP42859 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
HttP42859 Creb5-202ENSMUST00000203487 2648 ntAPPRIS ALT2 TSL 5 BASIC7.75□□□□□ -1.17
HttP42859 Rps12-ps5-201ENSMUST00000118272 389 ntBASIC7.75□□□□□ -1.17
HttP42859 2610528A11Rik-201ENSMUST00000179488 754 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
HttP42859 Gm37637-201ENSMUST00000195540 1256 ntBASIC7.75□□□□□ -1.17
HttP42859 Gm43287-201ENSMUST00000197747 600 ntBASIC7.75□□□□□ -1.17
HttP42859 AC139568.1-201ENSMUST00000222878 486 ntBASIC7.75□□□□□ -1.17
HttP42859 AC113031.1-201ENSMUST00000227400 432 ntBASIC7.75□□□□□ -1.17
HttP42859 Zscan4b-202ENSMUST00000210847 1779 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
HttP42859 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
HttP42859 Gm38302-201ENSMUST00000191676 2076 ntBASIC7.75□□□□□ -1.17
HttP42859 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC7.75□□□□□ -1.17
HttP42859 Gm7972-203ENSMUST00000209180 2184 ntTSL 3 BASIC7.75□□□□□ -1.17
HttP42859 AI314278-202ENSMUST00000209026 2373 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
HttP42859 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
HttP42859 Rnase6-202ENSMUST00000226194 2452 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
HttP42859 Mtpn-201ENSMUST00000031866 3960 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
HttP42859 Htr2c-201ENSMUST00000036303 4747 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
HttP42859 Adgrd1-203ENSMUST00000156437 4141 ntAPPRIS ALT2 TSL 1 (best) BASIC7.75□□□□□ -1.17
Retrieved 100 of 76,532 protein–RNA pairs in 71.2 ms