Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Ftx-203ENSMUST00000130063 4275 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Cstf3Q99LI7 Sorbs2-222ENSMUST00000141039 1699 ntTSL 5 BASIC7.43□□□□□ -1.22
Cstf3Q99LI7 Fshr-201ENSMUST00000035701 2079 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Cstf3Q99LI7 Gm44746-201ENSMUST00000205565 1349 ntBASIC7.43□□□□□ -1.22
Cstf3Q99LI7 Ston1-201ENSMUST00000064035 3287 ntAPPRIS P1 TSL 2 BASIC7.43□□□□□ -1.22
Cstf3Q99LI7 4933404O12Rik-202ENSMUST00000181190 4058 ntTSL 5 BASIC7.43□□□□□ -1.22
Cstf3Q99LI7 4933406K04Rik-203ENSMUST00000135423 1391 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Cstf3Q99LI7 Mterf1b-201ENSMUST00000177258 1368 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Cstf3Q99LI7 Adgrg6-201ENSMUST00000041168 6507 ntAPPRIS P2 TSL 1 (best) BASIC7.43□□□□□ -1.22
Cstf3Q99LI7 Slc22a8-202ENSMUST00000170817 3398 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
Cstf3Q99LI7 Gm36950-201ENSMUST00000191738 1499 ntTSL 5 BASIC7.43□□□□□ -1.22
Cstf3Q99LI7 Dppa2-201ENSMUST00000097175 1948 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Cstf3Q99LI7 E430024I08Rik-202ENSMUST00000220632 1513 ntTSL 5 BASIC7.42□□□□□ -1.22
Cstf3Q99LI7 Tsga10-208ENSMUST00000193669 1981 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
Cstf3Q99LI7 Tek-201ENSMUST00000071168 4176 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
Cstf3Q99LI7 Gm37457-201ENSMUST00000193639 2433 ntBASIC7.42□□□□□ -1.22
Cstf3Q99LI7 Eml1-201ENSMUST00000054955 3879 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Cstf3Q99LI7 Gm45805-201ENSMUST00000212695 2066 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Cstf3Q99LI7 AC159002.2-201ENSMUST00000228843 4874 ntBASIC7.42□□□□□ -1.22
Cstf3Q99LI7 Adarb2-202ENSMUST00000123187 4002 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Cstf3Q99LI7 Pafah2-202ENSMUST00000105870 3180 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Cstf3Q99LI7 Gm36694-201ENSMUST00000205855 2719 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Cstf3Q99LI7 Ankrd49-201ENSMUST00000034406 1753 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Cstf3Q99LI7 Gm22934-201ENSMUST00000103961 132 ntBASIC7.42□□□□□ -1.22
Cstf3Q99LI7 Pex3-203ENSMUST00000105541 1072 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Cstf3Q99LI7 Smim8-205ENSMUST00000108134 782 ntAPPRIS P1 TSL 2 BASIC7.42□□□□□ -1.22
Cstf3Q99LI7 Rnf170-203ENSMUST00000110575 966 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Cstf3Q99LI7 1700029I15Rik-202ENSMUST00000111280 416 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Cstf3Q99LI7 Gm5915-201ENSMUST00000116136 454 ntBASIC7.42□□□□□ -1.22
Cstf3Q99LI7 Gm14630-201ENSMUST00000118057 246 ntBASIC7.42□□□□□ -1.22
Cstf3Q99LI7 Gm12993-201ENSMUST00000119900 479 ntBASIC7.42□□□□□ -1.22
Cstf3Q99LI7 Gm8215-201ENSMUST00000120627 990 ntBASIC7.42□□□□□ -1.22
Cstf3Q99LI7 Bloodlinc-201ENSMUST00000126237 679 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Cstf3Q99LI7 Gm12144-201ENSMUST00000136288 1292 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Cstf3Q99LI7 Gm14642-201ENSMUST00000147357 470 ntTSL 3 BASIC7.42□□□□□ -1.22
Cstf3Q99LI7 Gm13839-201ENSMUST00000151639 506 ntTSL 2 BASIC7.42□□□□□ -1.22
Cstf3Q99LI7 Phf11b-201ENSMUST00000166121 1184 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Cstf3Q99LI7 Gm8439-201ENSMUST00000171482 420 ntAPPRIS P1 TSL 2 BASIC7.42□□□□□ -1.22
Cstf3Q99LI7 Csnk2b-203ENSMUST00000173114 917 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Cstf3Q99LI7 Trav9d-2-201ENSMUST00000178824 337 ntAPPRIS ALT2 BASIC7.42□□□□□ -1.22
Cstf3Q99LI7 Tdgf1-ps1-201ENSMUST00000179882 516 ntBASIC7.42□□□□□ -1.22
Cstf3Q99LI7 Trav9n-2-201ENSMUST00000180097 337 ntAPPRIS ALT2 BASIC7.42□□□□□ -1.22
Cstf3Q99LI7 Gm28722-201ENSMUST00000187630 1036 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Cstf3Q99LI7 Gm38254-201ENSMUST00000192276 1009 ntBASIC7.42□□□□□ -1.22
Cstf3Q99LI7 Gm35025-202ENSMUST00000193114 455 ntTSL 3 BASIC7.42□□□□□ -1.22
Cstf3Q99LI7 Gm37185-201ENSMUST00000193852 410 ntBASIC7.42□□□□□ -1.22
Cstf3Q99LI7 Gm42997-201ENSMUST00000196074 918 ntTSL 3 BASIC7.42□□□□□ -1.22
Cstf3Q99LI7 Gm44451-201ENSMUST00000203767 483 ntBASIC7.42□□□□□ -1.22
Cstf3Q99LI7 Mcee-204ENSMUST00000206882 391 ntTSL 2 BASIC7.42□□□□□ -1.22
Cstf3Q99LI7 Capsl-201ENSMUST00000042360 949 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Cstf3Q99LI7 Olfr290-201ENSMUST00000073468 948 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
Cstf3Q99LI7 6720489N17Rik-201ENSMUST00000091563 318 ntTSL 5 BASIC7.42□□□□□ -1.22
Cstf3Q99LI7 Duxbl3-201ENSMUST00000100804 2336 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Cstf3Q99LI7 Anxa9-201ENSMUST00000015846 1851 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Cstf3Q99LI7 Gm38300-201ENSMUST00000194245 1870 ntBASIC7.42□□□□□ -1.22
Cstf3Q99LI7 Osbpl3-202ENSMUST00000090019 4039 ntAPPRIS ALT1 TSL 5 BASIC7.42□□□□□ -1.22
Cstf3Q99LI7 Phf11a-201ENSMUST00000062307 1354 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Cstf3Q99LI7 Trp63-202ENSMUST00000065523 5257 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Cstf3Q99LI7 Gabpb2-202ENSMUST00000098873 8272 ntAPPRIS P2 TSL 5 BASIC7.42□□□□□ -1.22
Cstf3Q99LI7 Synpr-202ENSMUST00000112656 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Cstf3Q99LI7 Cdh8-207ENSMUST00000155527 3159 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Cstf3Q99LI7 Gm38099-201ENSMUST00000193280 3170 ntBASIC7.42□□□□□ -1.22
Cstf3Q99LI7 Olfr92-202ENSMUST00000214994 2073 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
Cstf3Q99LI7 Phf3-205ENSMUST00000186733 7567 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
Cstf3Q99LI7 Musk-207ENSMUST00000177951 3352 ntTSL 5 BASIC7.42□□□□□ -1.22
Cstf3Q99LI7 Musk-204ENSMUST00000098059 3352 ntTSL 5 BASIC7.42□□□□□ -1.22
Cstf3Q99LI7 Olfr1198-203ENSMUST00000215529 3413 ntAPPRIS P1 TSL 3 BASIC7.42□□□□□ -1.22
Cstf3Q99LI7 Gm39321-203ENSMUST00000217090 1575 ntTSL 5 BASIC7.42□□□□□ -1.22
Cstf3Q99LI7 9030607J07Rik-201ENSMUST00000202228 1622 ntBASIC7.41□□□□□ -1.22
Cstf3Q99LI7 Olfr115-203ENSMUST00000223366 2273 ntAPPRIS ALT2 TSL 5 BASIC7.41□□□□□ -1.22
Cstf3Q99LI7 Focad-201ENSMUST00000097992 5791 ntAPPRIS P2 TSL 5 BASIC7.41□□□□□ -1.22
Cstf3Q99LI7 Gimap6-202ENSMUST00000119315 3179 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Cstf3Q99LI7 Musk-202ENSMUST00000084578 3347 ntAPPRIS P2 TSL 5 BASIC7.41□□□□□ -1.22
Cstf3Q99LI7 Klrb1c-201ENSMUST00000167691 2623 ntAPPRIS P3 TSL 1 (best) BASIC7.41□□□□□ -1.22
Cstf3Q99LI7 Eapp-206ENSMUST00000163433 2658 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Cstf3Q99LI7 Gm37520-201ENSMUST00000194883 2672 ntBASIC7.41□□□□□ -1.22
Cstf3Q99LI7 Gm43681-201ENSMUST00000201581 1903 ntBASIC7.41□□□□□ -1.22
Cstf3Q99LI7 Snapc4-201ENSMUST00000035427 4363 ntAPPRIS P2 TSL 1 (best) BASIC7.41□□□□□ -1.22
Cstf3Q99LI7 Zfp180-205ENSMUST00000207002 3690 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Cstf3Q99LI7 Trpm7-201ENSMUST00000028843 6985 ntAPPRIS ALT1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Cstf3Q99LI7 Igkv8-27-201ENSMUST00000103381 300 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
Cstf3Q99LI7 Gm23358-201ENSMUST00000103887 110 ntBASIC7.41□□□□□ -1.22
Cstf3Q99LI7 Uqcrq-202ENSMUST00000109019 504 ntTSL 2 BASIC7.41□□□□□ -1.22
Cstf3Q99LI7 Smim23-202ENSMUST00000109365 331 ntTSL 5 BASIC7.41□□□□□ -1.22
Cstf3Q99LI7 Gm15355-201ENSMUST00000118929 285 ntBASIC7.41□□□□□ -1.22
Cstf3Q99LI7 Gm15763-201ENSMUST00000120136 403 ntBASIC7.41□□□□□ -1.22
Cstf3Q99LI7 Defa-ps3-201ENSMUST00000142705 282 ntBASIC7.41□□□□□ -1.22
Cstf3Q99LI7 Gm16116-201ENSMUST00000159472 430 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Cstf3Q99LI7 Gm6507-201ENSMUST00000159767 652 ntTSL 3 BASIC7.41□□□□□ -1.22
Cstf3Q99LI7 1700025N21Rik-201ENSMUST00000160997 686 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Cstf3Q99LI7 Gm17051-201ENSMUST00000170787 487 ntBASIC7.41□□□□□ -1.22
Cstf3Q99LI7 Milr1-208ENSMUST00000183111 982 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
Cstf3Q99LI7 Gm8307-201ENSMUST00000187682 1150 ntBASIC7.41□□□□□ -1.22
Cstf3Q99LI7 9330159M07Rik-204ENSMUST00000188156 737 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Cstf3Q99LI7 C430002N11Rik-204ENSMUST00000190054 443 ntTSL 3 BASIC7.41□□□□□ -1.22
Cstf3Q99LI7 Cnih4-205ENSMUST00000193907 531 ntTSL 2 BASIC7.41□□□□□ -1.22
Cstf3Q99LI7 Gm43539-201ENSMUST00000196190 363 ntTSL 3 BASIC7.41□□□□□ -1.22
Cstf3Q99LI7 Gm30275-201ENSMUST00000197620 498 ntTSL 2 BASIC7.41□□□□□ -1.22
Cstf3Q99LI7 Gm2566-201ENSMUST00000201267 431 ntBASIC7.41□□□□□ -1.22
Cstf3Q99LI7 Gm43196-201ENSMUST00000201762 2114 ntBASIC7.41□□□□□ -1.22
Retrieved 100 of 76,532 protein–RNA pairs in 64 ms