Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Gm38289-201ENSMUST00000194273 597 ntTSL 5 BASIC8.59□□□□□ -1.03
Ccdc38Q8CDN8 Clec4n-206ENSMUST00000205129 363 ntTSL 5 BASIC8.59□□□□□ -1.03
Ccdc38Q8CDN8 Ceacam-ps1-201ENSMUST00000205380 794 ntTSL 2 BASIC8.59□□□□□ -1.03
Ccdc38Q8CDN8 Gm45299-201ENSMUST00000210199 420 ntBASIC8.59□□□□□ -1.03
Ccdc38Q8CDN8 2310008N11Rik-202ENSMUST00000210263 422 ntTSL 3 BASIC8.59□□□□□ -1.03
Ccdc38Q8CDN8 Gm33103-201ENSMUST00000212717 527 ntTSL 3 BASIC8.59□□□□□ -1.03
Ccdc38Q8CDN8 Apoc2-201ENSMUST00000003074 631 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Ccdc38Q8CDN8 Tas2r116-201ENSMUST00000032315 918 ntAPPRIS P1 BASIC8.59□□□□□ -1.03
Ccdc38Q8CDN8 Pcp4-201ENSMUST00000061739 641 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Ccdc38Q8CDN8 Olfr290-201ENSMUST00000073468 948 ntAPPRIS P1 BASIC8.59□□□□□ -1.03
Ccdc38Q8CDN8 Gm25259-201ENSMUST00000083048 193 ntBASIC8.59□□□□□ -1.03
Ccdc38Q8CDN8 Olfr1179-201ENSMUST00000099825 924 ntAPPRIS P1 BASIC8.59□□□□□ -1.03
Ccdc38Q8CDN8 Dlg2-203ENSMUST00000107193 4910 ntAPPRIS ALT2 TSL 5 BASIC8.59□□□□□ -1.03
Ccdc38Q8CDN8 Pik3r4-201ENSMUST00000065778 4711 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Ccdc38Q8CDN8 Kcnj15-203ENSMUST00000113855 5128 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Ccdc38Q8CDN8 Dnajb4-202ENSMUST00000050073 2464 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Ccdc38Q8CDN8 Fmr1-204ENSMUST00000114655 4199 ntAPPRIS P5 TSL 5 BASIC8.59□□□□□ -1.03
Ccdc38Q8CDN8 Gm37403-201ENSMUST00000193775 3521 ntBASIC8.59□□□□□ -1.03
Ccdc38Q8CDN8 4933406K04Rik-203ENSMUST00000135423 1391 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Ccdc38Q8CDN8 Gm4863-201ENSMUST00000196907 1381 ntBASIC8.59□□□□□ -1.03
Ccdc38Q8CDN8 Lhx9-203ENSMUST00000093486 4551 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Ccdc38Q8CDN8 Slfn4-203ENSMUST00000215472 1830 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Ccdc38Q8CDN8 Tssc1-206ENSMUST00000221877 4091 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.04
Ccdc38Q8CDN8 Cebpz-201ENSMUST00000024885 4074 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.04
Ccdc38Q8CDN8 Abcc1-201ENSMUST00000100167 6792 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.04
Ccdc38Q8CDN8 Frmpd4-201ENSMUST00000112145 7924 ntAPPRIS P3 TSL 1 (best) BASIC8.58□□□□□ -1.04
Ccdc38Q8CDN8 Xiap-204ENSMUST00000115095 6670 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Ccdc38Q8CDN8 Ubtfl1-201ENSMUST00000098973 1649 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
Ccdc38Q8CDN8 Btnl10-202ENSMUST00000069941 4400 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Ccdc38Q8CDN8 AC158799.1-204ENSMUST00000217441 1321 ntTSL 5 BASIC8.58□□□□□ -1.04
Ccdc38Q8CDN8 Epb41l5-203ENSMUST00000163147 3370 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Ccdc38Q8CDN8 Unc79-201ENSMUST00000085079 7762 ntAPPRIS ALT2 TSL 2 BASIC8.58□□□□□ -1.04
Ccdc38Q8CDN8 Mroh2b-201ENSMUST00000045736 4829 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
Ccdc38Q8CDN8 Parp6-202ENSMUST00000050483 2631 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Ccdc38Q8CDN8 Scd3-201ENSMUST00000026220 3470 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Ccdc38Q8CDN8 4930480K23Rik-201ENSMUST00000180465 3326 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Ccdc38Q8CDN8 Klf5-202ENSMUST00000226784 2852 ntBASIC8.58□□□□□ -1.04
Ccdc38Q8CDN8 Cep85-202ENSMUST00000121566 3748 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
Ccdc38Q8CDN8 Gm38381-201ENSMUST00000193594 2275 ntBASIC8.58□□□□□ -1.04
Ccdc38Q8CDN8 Igkv8-27-201ENSMUST00000103381 300 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
Ccdc38Q8CDN8 Gm22934-201ENSMUST00000103961 132 ntBASIC8.58□□□□□ -1.04
Ccdc38Q8CDN8 1700029I15Rik-202ENSMUST00000111280 416 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Ccdc38Q8CDN8 Gm13458-201ENSMUST00000118239 367 ntBASIC8.58□□□□□ -1.04
Ccdc38Q8CDN8 Gm12604-201ENSMUST00000118382 380 ntBASIC8.58□□□□□ -1.04
Ccdc38Q8CDN8 Gm13680-201ENSMUST00000119790 793 ntBASIC8.58□□□□□ -1.04
Ccdc38Q8CDN8 Gm14450-201ENSMUST00000119984 240 ntBASIC8.58□□□□□ -1.04
Ccdc38Q8CDN8 Gm25320-201ENSMUST00000122551 324 ntBASIC8.58□□□□□ -1.04
Ccdc38Q8CDN8 Gm22424-201ENSMUST00000158527 87 ntBASIC8.58□□□□□ -1.04
Ccdc38Q8CDN8 Obox2-203ENSMUST00000174076 782 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
Ccdc38Q8CDN8 Gm6100-201ENSMUST00000180253 403 ntBASIC8.58□□□□□ -1.04
Ccdc38Q8CDN8 Gm26952-201ENSMUST00000181996 409 ntTSL 3 BASIC8.58□□□□□ -1.04
Ccdc38Q8CDN8 Gm28677-202ENSMUST00000186904 615 ntBASIC8.58□□□□□ -1.04
Ccdc38Q8CDN8 Gm20379-201ENSMUST00000188317 1204 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
Ccdc38Q8CDN8 Gm17835-201ENSMUST00000196870 499 ntBASIC8.58□□□□□ -1.04
Ccdc38Q8CDN8 Gm30275-201ENSMUST00000197620 498 ntTSL 2 BASIC8.58□□□□□ -1.04
Ccdc38Q8CDN8 Wars2-205ENSMUST00000198044 403 ntTSL 3 BASIC8.58□□□□□ -1.04
Ccdc38Q8CDN8 Gm5149-202ENSMUST00000199980 1250 ntTSL 2 BASIC8.58□□□□□ -1.04
Ccdc38Q8CDN8 Gm44442-201ENSMUST00000204298 422 ntTSL 3 BASIC8.58□□□□□ -1.04
Ccdc38Q8CDN8 Mcee-204ENSMUST00000206882 391 ntTSL 2 BASIC8.58□□□□□ -1.04
Ccdc38Q8CDN8 AC122539.2-201ENSMUST00000220207 404 ntBASIC8.58□□□□□ -1.04
Ccdc38Q8CDN8 Churc1-201ENSMUST00000041262 676 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Ccdc38Q8CDN8 Olfr1259-201ENSMUST00000090695 930 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
Ccdc38Q8CDN8 Olfr641-201ENSMUST00000098183 939 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
Ccdc38Q8CDN8 AC122263.1-201ENSMUST00000228636 2805 ntBASIC8.58□□□□□ -1.04
Ccdc38Q8CDN8 Huwe1-201ENSMUST00000026292 14579 ntAPPRIS P2 TSL 1 (best) BASIC8.58□□□□□ -1.04
Ccdc38Q8CDN8 Cstf2t-201ENSMUST00000066039 3750 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
Ccdc38Q8CDN8 Pbrm1-205ENSMUST00000112092 5009 ntTSL 5 BASIC8.58□□□□□ -1.04
Ccdc38Q8CDN8 4933406J09Rik-201ENSMUST00000203352 1505 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Ccdc38Q8CDN8 Rnase4-201ENSMUST00000022428 1518 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Ccdc38Q8CDN8 Sorbs2os-201ENSMUST00000135116 2474 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Ccdc38Q8CDN8 Mpdz-216ENSMUST00000220807 6295 ntAPPRIS ALT2 TSL 5 BASIC8.57□□□□□ -1.04
Ccdc38Q8CDN8 AC158537.1-201ENSMUST00000224637 1711 ntBASIC8.57□□□□□ -1.04
Ccdc38Q8CDN8 Myof-211ENSMUST00000226068 6633 ntAPPRIS ALT2 BASIC8.57□□□□□ -1.04
Ccdc38Q8CDN8 Hdac9-205ENSMUST00000209902 7940 ntAPPRIS ALT2 TSL 5 BASIC8.57□□□□□ -1.04
Ccdc38Q8CDN8 Cflar-205ENSMUST00000114313 6572 ntAPPRIS P2 TSL 1 (best) BASIC8.57□□□□□ -1.04
Ccdc38Q8CDN8 Gm44996-201ENSMUST00000208787 2980 ntBASIC8.57□□□□□ -1.04
Ccdc38Q8CDN8 Ssr3-201ENSMUST00000029414 2957 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Ccdc38Q8CDN8 Kcnb2-202ENSMUST00000175681 3963 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
Ccdc38Q8CDN8 Gm23062-201ENSMUST00000102349 110 ntBASIC8.57□□□□□ -1.04
Ccdc38Q8CDN8 Igkv4-72-201ENSMUST00000103346 402 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
Ccdc38Q8CDN8 Ighv5-12-201ENSMUST00000103450 353 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
Ccdc38Q8CDN8 Mrps23-202ENSMUST00000107915 332 ntTSL 5 BASIC8.57□□□□□ -1.04
Ccdc38Q8CDN8 Ola1-203ENSMUST00000112055 1251 ntTSL 5 BASIC8.57□□□□□ -1.04
Ccdc38Q8CDN8 4930555O08Rik-201ENSMUST00000122821 668 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Ccdc38Q8CDN8 Bloodlinc-201ENSMUST00000126237 679 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Ccdc38Q8CDN8 Olfr636-ps1-201ENSMUST00000134827 935 ntBASIC8.57□□□□□ -1.04
Ccdc38Q8CDN8 Gm11186-201ENSMUST00000137096 1179 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Ccdc38Q8CDN8 Slc15a2-212ENSMUST00000168279 958 ntTSL 3 BASIC8.57□□□□□ -1.04
Ccdc38Q8CDN8 Oas1h-202ENSMUST00000171820 931 ntTSL 5 BASIC8.57□□□□□ -1.04
Ccdc38Q8CDN8 Olfr760-ps1-201ENSMUST00000172563 748 ntBASIC8.57□□□□□ -1.04
Ccdc38Q8CDN8 Milr1-208ENSMUST00000183111 982 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
Ccdc38Q8CDN8 Gm18800-201ENSMUST00000186588 637 ntTSL 3 BASIC8.57□□□□□ -1.04
Ccdc38Q8CDN8 1700027F09Rik-201ENSMUST00000189767 767 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Ccdc38Q8CDN8 Gm37185-201ENSMUST00000193852 410 ntBASIC8.57□□□□□ -1.04
Ccdc38Q8CDN8 1700113A16Rik-202ENSMUST00000197172 776 ntTSL 2 BASIC8.57□□□□□ -1.04
Ccdc38Q8CDN8 Gm7879-202ENSMUST00000200338 635 ntTSL 5 BASIC8.57□□□□□ -1.04
Ccdc38Q8CDN8 4933439J24Rik-201ENSMUST00000200866 853 ntBASIC8.57□□□□□ -1.04
Ccdc38Q8CDN8 AC154307.1-201ENSMUST00000214799 90 ntBASIC8.57□□□□□ -1.04
Ccdc38Q8CDN8 CT010462.1-201ENSMUST00000220554 1200 ntTSL 5 BASIC8.57□□□□□ -1.04
Ccdc38Q8CDN8 AC122356.2-201ENSMUST00000226962 820 ntBASIC8.57□□□□□ -1.04
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms