Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Gm8489-201ENSMUST00000209876 1152 ntBASIC9.69□□□□□ -0.86
Ccdc60Q8C4J0 Hsf2bp-201ENSMUST00000002145 2867 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Ccdc60Q8C4J0 Gm18305-201ENSMUST00000216532 2128 ntBASIC9.69□□□□□ -0.86
Ccdc60Q8C4J0 Gm40552-201ENSMUST00000218233 1258 ntTSL 5 BASIC9.69□□□□□ -0.86
Ccdc60Q8C4J0 AC192091.1-201ENSMUST00000218668 439 ntBASIC9.69□□□□□ -0.86
Ccdc60Q8C4J0 Cthrc1-204ENSMUST00000226433 596 ntBASIC9.69□□□□□ -0.86
Ccdc60Q8C4J0 Ppbp-201ENSMUST00000031319 1083 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Ccdc60Q8C4J0 Gm24046-201ENSMUST00000083111 165 ntBASIC9.69□□□□□ -0.86
Ccdc60Q8C4J0 Olfr417-201ENSMUST00000085862 930 ntAPPRIS P1 BASIC9.69□□□□□ -0.86
Ccdc60Q8C4J0 Nt5c2-201ENSMUST00000086961 3745 ntTSL 5 BASIC9.69□□□□□ -0.86
Ccdc60Q8C4J0 Plp1-201ENSMUST00000033800 4699 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Ccdc60Q8C4J0 Rtel1-205ENSMUST00000108815 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Ccdc60Q8C4J0 Panct2-201ENSMUST00000181489 3849 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Ccdc60Q8C4J0 Peak1-201ENSMUST00000061552 6996 ntAPPRIS P2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Ccdc60Q8C4J0 Vmn1r70-204ENSMUST00000228090 3185 ntAPPRIS ALT2 BASIC9.69□□□□□ -0.86
Ccdc60Q8C4J0 Muc5ac-203ENSMUST00000163321 8505 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
Ccdc60Q8C4J0 Slc41a2-201ENSMUST00000039956 4742 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Ccdc60Q8C4J0 Wdr76-204ENSMUST00000110603 2341 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
Ccdc60Q8C4J0 Siae-202ENSMUST00000213126 2306 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
Ccdc60Q8C4J0 Elf5-201ENSMUST00000028609 2222 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Ccdc60Q8C4J0 Vmn1r44-213ENSMUST00000228700 2004 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
Ccdc60Q8C4J0 Cntn1-204ENSMUST00000169825 5671 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Ccdc60Q8C4J0 R3hdm2-203ENSMUST00000105249 3654 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
Ccdc60Q8C4J0 Slc7a2-204ENSMUST00000118432 3681 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Ccdc60Q8C4J0 Klhl13-202ENSMUST00000115313 3251 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Ccdc60Q8C4J0 Xlr3a-202ENSMUST00000114524 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Ccdc60Q8C4J0 Gm2244-201ENSMUST00000164372 1506 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Ccdc60Q8C4J0 Elk3-204ENSMUST00000151153 1336 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Ccdc60Q8C4J0 Igkv9-123-201ENSMUST00000103313 377 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
Ccdc60Q8C4J0 Gm22426-201ENSMUST00000103811 96 ntBASIC9.68□□□□□ -0.86
Ccdc60Q8C4J0 Gm11558-201ENSMUST00000118454 459 ntBASIC9.68□□□□□ -0.86
Ccdc60Q8C4J0 Olfr634-ps1-201ENSMUST00000119267 955 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
Ccdc60Q8C4J0 Gm15092-201ENSMUST00000138467 574 ntTSL 5 BASIC9.68□□□□□ -0.86
Ccdc60Q8C4J0 Gm14376-201ENSMUST00000145297 297 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Ccdc60Q8C4J0 Gm24647-201ENSMUST00000157112 113 ntBASIC9.68□□□□□ -0.86
Ccdc60Q8C4J0 Mir1983-201ENSMUST00000157523 132 ntBASIC9.68□□□□□ -0.86
Ccdc60Q8C4J0 Gm9141-201ENSMUST00000159355 1007 ntBASIC9.68□□□□□ -0.86
Ccdc60Q8C4J0 Gm17057-201ENSMUST00000169887 591 ntTSL 3 BASIC9.68□□□□□ -0.86
Ccdc60Q8C4J0 Rps12-ps22-201ENSMUST00000179382 402 ntBASIC9.68□□□□□ -0.86
Ccdc60Q8C4J0 Gm6556-201ENSMUST00000181118 362 ntTSL 5 BASIC9.68□□□□□ -0.86
Ccdc60Q8C4J0 Mir7115-201ENSMUST00000184275 64 ntBASIC9.68□□□□□ -0.86
Ccdc60Q8C4J0 Gm20111-201ENSMUST00000184830 319 ntBASIC9.68□□□□□ -0.86
Ccdc60Q8C4J0 Txn-ps1-201ENSMUST00000186385 309 ntBASIC9.68□□□□□ -0.86
Ccdc60Q8C4J0 Gm37392-201ENSMUST00000192098 516 ntBASIC9.68□□□□□ -0.86
Ccdc60Q8C4J0 4930425L21Rik-201ENSMUST00000203439 899 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Ccdc60Q8C4J0 AC139569.1-201ENSMUST00000226080 614 ntBASIC9.68□□□□□ -0.86
Ccdc60Q8C4J0 Gm5250-201ENSMUST00000059065 321 ntBASIC9.68□□□□□ -0.86
Ccdc60Q8C4J0 Olfr290-201ENSMUST00000073468 948 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
Ccdc60Q8C4J0 Gm20302-201ENSMUST00000080671 275 ntBASIC9.68□□□□□ -0.86
Ccdc60Q8C4J0 Gm20560-201ENSMUST00000204577 3513 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Ccdc60Q8C4J0 Gm805-201ENSMUST00000181667 3160 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Ccdc60Q8C4J0 Myo3b-203ENSMUST00000112243 6213 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
Ccdc60Q8C4J0 A730085K08Rik-201ENSMUST00000177015 2013 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Ccdc60Q8C4J0 Slc12a6-202ENSMUST00000053666 6060 ntAPPRIS ALT1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Ccdc60Q8C4J0 Enox2-204ENSMUST00000114914 3936 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Ccdc60Q8C4J0 Sgcg-201ENSMUST00000077954 3515 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Ccdc60Q8C4J0 Adcy10-201ENSMUST00000027852 5210 ntAPPRIS P2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Ccdc60Q8C4J0 Aqp9-203ENSMUST00000113570 1712 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Ccdc60Q8C4J0 Fktn-201ENSMUST00000061771 3370 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
Ccdc60Q8C4J0 4930563E22Rik-201ENSMUST00000066087 3313 ntBASIC9.67□□□□□ -0.86
Ccdc60Q8C4J0 Gprasp1-206ENSMUST00000166554 4993 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Ccdc60Q8C4J0 Cabyr-207ENSMUST00000191078 1642 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
Ccdc60Q8C4J0 Dusp18-201ENSMUST00000055931 4632 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Ccdc60Q8C4J0 Gcm2-201ENSMUST00000021791 3073 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Ccdc60Q8C4J0 Adarb2-201ENSMUST00000064473 6721 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Ccdc60Q8C4J0 Cdh16-204ENSMUST00000211903 2874 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
Ccdc60Q8C4J0 Nsd2-204ENSMUST00000114397 5738 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Ccdc60Q8C4J0 Gm9256-201ENSMUST00000198106 1420 ntBASIC9.67□□□□□ -0.86
Ccdc60Q8C4J0 Spp1-201ENSMUST00000031243 1410 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
Ccdc60Q8C4J0 Myo1h-205ENSMUST00000169347 3545 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
Ccdc60Q8C4J0 4930480K23Rik-201ENSMUST00000180465 3326 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Ccdc60Q8C4J0 Olfr544-201ENSMUST00000051201 3270 ntAPPRIS P1 TSL 2 BASIC9.67□□□□□ -0.86
Ccdc60Q8C4J0 4931406B18Rik-208ENSMUST00000191516 2566 ntAPPRIS P2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Ccdc60Q8C4J0 Ighv7-4-201ENSMUST00000103477 360 ntAPPRIS ALT2 BASIC9.67□□□□□ -0.86
Ccdc60Q8C4J0 Gm22439-201ENSMUST00000104048 132 ntBASIC9.67□□□□□ -0.86
Ccdc60Q8C4J0 H3f3a-ps1-201ENSMUST00000119546 410 ntBASIC9.67□□□□□ -0.86
Ccdc60Q8C4J0 Gm11309-201ENSMUST00000127108 613 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Ccdc60Q8C4J0 Prkag2os1-201ENSMUST00000134633 991 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Ccdc60Q8C4J0 Gm15124-201ENSMUST00000142053 953 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Ccdc60Q8C4J0 Gm8093-203ENSMUST00000144982 1020 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Ccdc60Q8C4J0 Gm11551-201ENSMUST00000147438 410 ntTSL 2 BASIC9.67□□□□□ -0.86
Ccdc60Q8C4J0 Gm16143-201ENSMUST00000155982 538 ntTSL 5 BASIC9.67□□□□□ -0.86
Ccdc60Q8C4J0 Mir1932-201ENSMUST00000157390 90 ntBASIC9.67□□□□□ -0.86
Ccdc60Q8C4J0 Gm4340-201ENSMUST00000163113 807 ntAPPRIS ALT2 BASIC9.67□□□□□ -0.86
Ccdc60Q8C4J0 Gm19705-201ENSMUST00000180495 496 ntTSL 5 BASIC9.67□□□□□ -0.86
Ccdc60Q8C4J0 Rnf170-ps-201ENSMUST00000181188 859 ntBASIC9.67□□□□□ -0.86
Ccdc60Q8C4J0 Gm5181-201ENSMUST00000183140 971 ntBASIC9.67□□□□□ -0.86
Ccdc60Q8C4J0 Gm28535-201ENSMUST00000188069 885 ntTSL 3 BASIC9.67□□□□□ -0.86
Ccdc60Q8C4J0 Ube2n-ps1-201ENSMUST00000201768 459 ntBASIC9.67□□□□□ -0.86
Ccdc60Q8C4J0 Klra13-ps-203ENSMUST00000204367 850 ntBASIC9.67□□□□□ -0.86
Ccdc60Q8C4J0 Gm44785-202ENSMUST00000208294 932 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Ccdc60Q8C4J0 5830408C22Rik-203ENSMUST00000210596 326 ntTSL 3 BASIC9.67□□□□□ -0.86
Ccdc60Q8C4J0 Atp8b3-202ENSMUST00000219648 524 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Ccdc60Q8C4J0 7420701I03Rik-201ENSMUST00000222157 737 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Ccdc60Q8C4J0 AL844586.1-201ENSMUST00000224297 1042 ntBASIC9.67□□□□□ -0.86
Ccdc60Q8C4J0 Vmn1r196-201ENSMUST00000091735 906 ntAPPRIS P2 BASIC9.67□□□□□ -0.86
Ccdc60Q8C4J0 Cfap69-210ENSMUST00000196165 4408 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Ccdc60Q8C4J0 Gm3892-202ENSMUST00000178043 3539 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Ccdc60Q8C4J0 Gm10593-201ENSMUST00000178906 3539 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Ccdc60Q8C4J0 Gm43534-201ENSMUST00000197685 2853 ntBASIC9.67□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 59.6 ms