Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Slirp-204ENSMUST00000161023 2701 ntAPPRIS P2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Vps54Q5SPW0 Dgkh-204ENSMUST00000227767 3319 ntBASIC9.14□□□□□ -0.95
Vps54Q5SPW0 Cfap44-202ENSMUST00000120049 6199 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
Vps54Q5SPW0 Zfp946-201ENSMUST00000088763 2935 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Vps54Q5SPW0 Mpdz-203ENSMUST00000107262 7518 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
Vps54Q5SPW0 Gm29154-258ENSMUST00000217560 1733 ntTSL 5 BASIC9.14□□□□□ -0.95
Vps54Q5SPW0 Morc1-201ENSMUST00000023330 3050 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Vps54Q5SPW0 Zranb1-205ENSMUST00000215716 2205 ntAPPRIS ALT2 TSL 5 BASIC9.13□□□□□ -0.95
Vps54Q5SPW0 Sema6a-201ENSMUST00000019791 6856 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Vps54Q5SPW0 Slc24a2-202ENSMUST00000107155 2171 ntTSL 5 BASIC9.13□□□□□ -0.95
Vps54Q5SPW0 Gm28852-201ENSMUST00000186666 2160 ntTSL 5 BASIC9.13□□□□□ -0.95
Vps54Q5SPW0 Gm28880-201ENSMUST00000190161 2160 ntTSL 5 BASIC9.13□□□□□ -0.95
Vps54Q5SPW0 Slfn4-202ENSMUST00000167596 3703 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Vps54Q5SPW0 Cd44-206ENSMUST00000111192 1305 ntAPPRIS ALT2 TSL 5 BASIC9.13□□□□□ -0.95
Vps54Q5SPW0 Mcm4-201ENSMUST00000023353 3589 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Vps54Q5SPW0 Gm1587-201ENSMUST00000100372 372 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Vps54Q5SPW0 Gm25725-201ENSMUST00000104528 130 ntBASIC9.13□□□□□ -0.95
Vps54Q5SPW0 Gm14480-201ENSMUST00000118521 433 ntBASIC9.13□□□□□ -0.95
Vps54Q5SPW0 Gm16418-201ENSMUST00000118577 171 ntBASIC9.13□□□□□ -0.95
Vps54Q5SPW0 Gm11895-201ENSMUST00000122165 467 ntBASIC9.13□□□□□ -0.95
Vps54Q5SPW0 Gm15507-203ENSMUST00000140958 658 ntTSL 3 BASIC9.13□□□□□ -0.95
Vps54Q5SPW0 Il1rn-205ENSMUST00000142093 321 ntTSL 3 BASIC9.13□□□□□ -0.95
Vps54Q5SPW0 Btf3-205ENSMUST00000152704 888 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Vps54Q5SPW0 A930031H19Rik-202ENSMUST00000153810 949 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Vps54Q5SPW0 Gm6507-201ENSMUST00000159767 652 ntTSL 3 BASIC9.13□□□□□ -0.95
Vps54Q5SPW0 Rps12-ps22-201ENSMUST00000179382 402 ntBASIC9.13□□□□□ -0.95
Vps54Q5SPW0 D13Ertd608e-202ENSMUST00000195797 704 ntAPPRIS P5 TSL 1 (best) BASIC9.13□□□□□ -0.95
Vps54Q5SPW0 Gm43387-201ENSMUST00000196896 1066 ntBASIC9.13□□□□□ -0.95
Vps54Q5SPW0 Gm42938-201ENSMUST00000198414 1072 ntBASIC9.13□□□□□ -0.95
Vps54Q5SPW0 Spink8-202ENSMUST00000198988 768 ntAPPRIS P2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Vps54Q5SPW0 Oaz3-207ENSMUST00000204913 689 ntTSL 5 BASIC9.13□□□□□ -0.95
Vps54Q5SPW0 Gm36435-201ENSMUST00000213341 1178 ntTSL 5 BASIC9.13□□□□□ -0.95
Vps54Q5SPW0 Gm32515-201ENSMUST00000219396 350 ntTSL 2 BASIC9.13□□□□□ -0.95
Vps54Q5SPW0 AC159205.1-201ENSMUST00000225513 1099 ntBASIC9.13□□□□□ -0.95
Vps54Q5SPW0 Olfr1445-201ENSMUST00000049624 1001 ntAPPRIS P1 BASIC9.13□□□□□ -0.95
Vps54Q5SPW0 Rhox11-201ENSMUST00000054147 811 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Vps54Q5SPW0 Kcnj15-201ENSMUST00000037154 5089 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Vps54Q5SPW0 Dnajc6-201ENSMUST00000038207 5258 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Vps54Q5SPW0 Pex5l-211ENSMUST00000194016 4206 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Vps54Q5SPW0 Zfp438-201ENSMUST00000063989 3209 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Vps54Q5SPW0 Vmn2r12-201ENSMUST00000095922 2496 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
Vps54Q5SPW0 Rapgef6-210ENSMUST00000207429 5164 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Vps54Q5SPW0 4930512H18Rik-201ENSMUST00000133752 1493 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Vps54Q5SPW0 Ash1l-202ENSMUST00000186583 11644 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
Vps54Q5SPW0 Pwp2-201ENSMUST00000042556 3872 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Vps54Q5SPW0 Edar-201ENSMUST00000003312 3637 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Vps54Q5SPW0 Mccc1os-201ENSMUST00000124469 3353 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Vps54Q5SPW0 Sorbs2-222ENSMUST00000141039 1699 ntTSL 5 BASIC9.13□□□□□ -0.95
Vps54Q5SPW0 Gm44581-201ENSMUST00000206227 1693 ntTSL 5 BASIC9.13□□□□□ -0.95
Vps54Q5SPW0 Zfp128-202ENSMUST00000144578 3834 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Vps54Q5SPW0 Gm37618-201ENSMUST00000192891 3075 ntBASIC9.13□□□□□ -0.95
Vps54Q5SPW0 Myo1h-205ENSMUST00000169347 3545 ntAPPRIS ALT2 TSL 5 BASIC9.13□□□□□ -0.95
Vps54Q5SPW0 Gm38300-201ENSMUST00000194245 1870 ntBASIC9.13□□□□□ -0.95
Vps54Q5SPW0 Aloxe3-201ENSMUST00000021268 3019 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Vps54Q5SPW0 Cabyr-207ENSMUST00000191078 1642 ntAPPRIS P3 TSL 1 (best) BASIC9.13□□□□□ -0.95
Vps54Q5SPW0 Trpm3-206ENSMUST00000099569 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Vps54Q5SPW0 Mum1l1-203ENSMUST00000113043 4600 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
Vps54Q5SPW0 Olfr1426-204ENSMUST00000219005 2507 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
Vps54Q5SPW0 Vmn1r70-204ENSMUST00000228090 3185 ntAPPRIS ALT2 BASIC9.12□□□□□ -0.95
Vps54Q5SPW0 Vmn1r4-202ENSMUST00000176838 2235 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Vps54Q5SPW0 Klhl13-202ENSMUST00000115313 3251 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Vps54Q5SPW0 Pogz-203ENSMUST00000107266 4100 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.95
Vps54Q5SPW0 Samd3-206ENSMUST00000220219 1744 ntAPPRIS P4 TSL 5 BASIC9.12□□□□□ -0.95
Vps54Q5SPW0 Gm42973-201ENSMUST00000197913 3200 ntBASIC9.12□□□□□ -0.95
Vps54Q5SPW0 4931406B18Rik-208ENSMUST00000191516 2566 ntAPPRIS P2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Vps54Q5SPW0 Mir688-201ENSMUST00000102055 75 ntBASIC9.12□□□□□ -0.95
Vps54Q5SPW0 Gm23323-201ENSMUST00000104471 133 ntBASIC9.12□□□□□ -0.95
Vps54Q5SPW0 Gm11810-201ENSMUST00000118311 333 ntBASIC9.12□□□□□ -0.95
Vps54Q5SPW0 Hnf1aos1-203ENSMUST00000131845 740 ntTSL 3 BASIC9.12□□□□□ -0.95
Vps54Q5SPW0 4930551L18Rik-201ENSMUST00000156086 700 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Vps54Q5SPW0 Gm23007-201ENSMUST00000158951 177 ntBASIC9.12□□□□□ -0.95
Vps54Q5SPW0 Gm20625-201ENSMUST00000177065 698 ntTSL 3 BASIC9.12□□□□□ -0.95
Vps54Q5SPW0 Gm3149-203ENSMUST00000179649 618 ntAPPRIS ALT2 TSL 2 BASIC9.12□□□□□ -0.95
Vps54Q5SPW0 Gm28006-201ENSMUST00000183841 122 ntBASIC9.12□□□□□ -0.95
Vps54Q5SPW0 Gm3476-203ENSMUST00000190582 612 ntTSL 5 BASIC9.12□□□□□ -0.95
Vps54Q5SPW0 Gm29999-202ENSMUST00000193554 671 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Vps54Q5SPW0 Gm38063-201ENSMUST00000193990 342 ntBASIC9.12□□□□□ -0.95
Vps54Q5SPW0 Gm36816-201ENSMUST00000204824 493 ntTSL 3 BASIC9.12□□□□□ -0.95
Vps54Q5SPW0 Mypopos-203ENSMUST00000206304 441 ntTSL 3 BASIC9.12□□□□□ -0.95
Vps54Q5SPW0 Gm8077-201ENSMUST00000209221 1024 ntBASIC9.12□□□□□ -0.95
Vps54Q5SPW0 Gm45446-201ENSMUST00000209348 216 ntBASIC9.12□□□□□ -0.95
Vps54Q5SPW0 AC192091.1-201ENSMUST00000218668 439 ntBASIC9.12□□□□□ -0.95
Vps54Q5SPW0 Gm36719-201ENSMUST00000219518 927 ntTSL 5 BASIC9.12□□□□□ -0.95
Vps54Q5SPW0 Atp8b3-202ENSMUST00000219648 524 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Vps54Q5SPW0 AC154382.1-201ENSMUST00000220958 1282 ntBASIC9.12□□□□□ -0.95
Vps54Q5SPW0 AC139941.1-201ENSMUST00000221517 478 ntBASIC9.12□□□□□ -0.95
Vps54Q5SPW0 AC165155.1-201ENSMUST00000228932 445 ntBASIC9.12□□□□□ -0.95
Vps54Q5SPW0 Olfr680-ps1-201ENSMUST00000042676 936 ntAPPRIS P1 BASIC9.12□□□□□ -0.95
Vps54Q5SPW0 Olfr1322-201ENSMUST00000070304 933 ntAPPRIS P1 BASIC9.12□□□□□ -0.95
Vps54Q5SPW0 Gm25926-201ENSMUST00000082899 160 ntBASIC9.12□□□□□ -0.95
Vps54Q5SPW0 Muc4-201ENSMUST00000096106 11277 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
Vps54Q5SPW0 Gm9256-201ENSMUST00000198106 1420 ntBASIC9.12□□□□□ -0.95
Vps54Q5SPW0 Gm45360-201ENSMUST00000210698 1405 ntBASIC9.12□□□□□ -0.95
Vps54Q5SPW0 Atxn7l1-201ENSMUST00000077456 1624 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Vps54Q5SPW0 Gm42678-201ENSMUST00000197163 2221 ntBASIC9.12□□□□□ -0.95
Vps54Q5SPW0 Tmem161b-206ENSMUST00000225069 2414 ntBASIC9.12□□□□□ -0.95
Vps54Q5SPW0 Med23-201ENSMUST00000020159 4798 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Vps54Q5SPW0 Trdmt1-202ENSMUST00000124488 3788 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Vps54Q5SPW0 Olfr1425-202ENSMUST00000214918 2178 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
Vps54Q5SPW0 Slc4a4-201ENSMUST00000113216 2518 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms