Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Utrn-204ENSMUST00000217994 3161 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Col8a1Q00780 Snapc4-202ENSMUST00000114115 4368 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
Col8a1Q00780 Gdpgp1-201ENSMUST00000062915 4189 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Col8a1Q00780 Runx1-207ENSMUST00000189679 2538 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Col8a1Q00780 D630033O11Rik-205ENSMUST00000210802 2761 ntTSL 5 BASIC6.94□□□□□ -1.3
Col8a1Q00780 Dnajc28-204ENSMUST00000169982 3535 ntAPPRIS P4 TSL 2 BASIC6.94□□□□□ -1.3
Col8a1Q00780 Ccdc162-211ENSMUST00000190522 1810 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
Col8a1Q00780 Numb-201ENSMUST00000021647 1815 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
Col8a1Q00780 Sytl4-201ENSMUST00000033608 3753 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Col8a1Q00780 Abce1-201ENSMUST00000080536 3793 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Col8a1Q00780 Rbm43-202ENSMUST00000102768 2106 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
Col8a1Q00780 Gm12187-201ENSMUST00000119584 1375 ntBASIC6.94□□□□□ -1.3
Col8a1Q00780 Odam-202ENSMUST00000129757 1370 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
Col8a1Q00780 Olfr641-202ENSMUST00000213214 2379 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
Col8a1Q00780 Fam60a-209ENSMUST00000203164 2442 ntTSL 5 BASIC6.93□□□□□ -1.3
Col8a1Q00780 Gm40841-202ENSMUST00000222823 3989 ntTSL 5 BASIC6.93□□□□□ -1.3
Col8a1Q00780 AC154314.1-201ENSMUST00000223995 2996 ntBASIC6.93□□□□□ -1.3
Col8a1Q00780 Hpd-201ENSMUST00000031398 1404 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Col8a1Q00780 Gm3234-201ENSMUST00000222644 5061 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Col8a1Q00780 Gm17638-201ENSMUST00000181255 4343 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Col8a1Q00780 Bmx-202ENSMUST00000112265 3005 ntAPPRIS P2 TSL 1 (best) BASIC6.93□□□□□ -1.3
Col8a1Q00780 Supt20-202ENSMUST00000170552 1968 ntAPPRIS P2 TSL 1 (best) BASIC6.93□□□□□ -1.3
Col8a1Q00780 Gm16130-201ENSMUST00000153106 2799 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Col8a1Q00780 Wls-201ENSMUST00000068952 3559 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Col8a1Q00780 Pde7b-201ENSMUST00000020165 4137 ntAPPRIS P3 TSL 1 (best) BASIC6.93□□□□□ -1.3
Col8a1Q00780 Carf-209ENSMUST00000187978 5463 ntAPPRIS P3 TSL 1 (best) BASIC6.93□□□□□ -1.3
Col8a1Q00780 4930407I10Rik-201ENSMUST00000100396 4673 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Col8a1Q00780 Unc5c-201ENSMUST00000075282 3890 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Col8a1Q00780 Gm7416-201ENSMUST00000117448 1487 ntBASIC6.93□□□□□ -1.3
Col8a1Q00780 Rfxank-201ENSMUST00000075724 3609 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Col8a1Q00780 Mndal-204ENSMUST00000188804 2026 ntAPPRIS P2 TSL 1 (best) BASIC6.93□□□□□ -1.3
Col8a1Q00780 Gpbp1-201ENSMUST00000047627 3694 ntAPPRIS P3 TSL 1 (best) BASIC6.93□□□□□ -1.3
Col8a1Q00780 Prdm10-201ENSMUST00000074510 3408 ntAPPRIS P2 TSL 5 BASIC6.93□□□□□ -1.3
Col8a1Q00780 Ikbkg-202ENSMUST00000064407 4530 ntAPPRIS P3 TSL 1 (best) BASIC6.93□□□□□ -1.3
Col8a1Q00780 Tbc1d8b-201ENSMUST00000096313 5094 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Col8a1Q00780 Frrs1-202ENSMUST00000195905 6823 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
Col8a1Q00780 St6galnac1-201ENSMUST00000009732 2392 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Col8a1Q00780 Slc12a1-201ENSMUST00000028630 4645 ntAPPRIS P5 TSL 1 (best) BASIC6.93□□□□□ -1.3
Col8a1Q00780 2310069B03Rik-202ENSMUST00000186147 1833 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Col8a1Q00780 Ola1-203ENSMUST00000112055 1251 ntTSL 5 BASIC6.93□□□□□ -1.3
Col8a1Q00780 Gin1-202ENSMUST00000112842 1037 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Col8a1Q00780 Gm12142-201ENSMUST00000117114 485 ntBASIC6.93□□□□□ -1.3
Col8a1Q00780 Gm12365-201ENSMUST00000117931 568 ntBASIC6.93□□□□□ -1.3
Col8a1Q00780 Gm13879-201ENSMUST00000118308 242 ntBASIC6.93□□□□□ -1.3
Col8a1Q00780 Gm11926-201ENSMUST00000118520 430 ntBASIC6.93□□□□□ -1.3
Col8a1Q00780 Gm15160-201ENSMUST00000120553 907 ntBASIC6.93□□□□□ -1.3
Col8a1Q00780 Apol7d-203ENSMUST00000126516 1193 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Col8a1Q00780 1700060C16Rik-201ENSMUST00000150559 645 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Col8a1Q00780 Trim30e-ps1-202ENSMUST00000151294 731 ntBASIC6.93□□□□□ -1.3
Col8a1Q00780 Gm44641-201ENSMUST00000152342 323 ntTSL 3 BASIC6.93□□□□□ -1.3
Col8a1Q00780 2610001J05Rik-202ENSMUST00000155856 1077 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Col8a1Q00780 Clec4a2-204ENSMUST00000161365 918 ntAPPRIS P3 TSL 1 (best) BASIC6.93□□□□□ -1.3
Col8a1Q00780 Gm16580-201ENSMUST00000162696 1044 ntBASIC6.93□□□□□ -1.3
Col8a1Q00780 Vmn1r-ps56-201ENSMUST00000172769 965 ntBASIC6.93□□□□□ -1.3
Col8a1Q00780 Gm23639-201ENSMUST00000175078 132 ntBASIC6.93□□□□□ -1.3
Col8a1Q00780 Gm22702-201ENSMUST00000175372 69 ntBASIC6.93□□□□□ -1.3
Col8a1Q00780 Gm23617-201ENSMUST00000175410 95 ntBASIC6.93□□□□□ -1.3
Col8a1Q00780 4921523L03Rik-201ENSMUST00000175729 1186 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Col8a1Q00780 Gm2058-201ENSMUST00000178791 560 ntBASIC6.93□□□□□ -1.3
Col8a1Q00780 Gm21182-201ENSMUST00000178899 794 ntBASIC6.93□□□□□ -1.3
Col8a1Q00780 Ppp1r2-ps7-202ENSMUST00000185057 763 ntBASIC6.93□□□□□ -1.3
Col8a1Q00780 Ms4a3-202ENSMUST00000186023 966 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Col8a1Q00780 9330159M07Rik-204ENSMUST00000188156 737 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Col8a1Q00780 Olfr318-201ENSMUST00000189911 1026 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
Col8a1Q00780 Gm28189-201ENSMUST00000190085 571 ntTSL 3 BASIC6.93□□□□□ -1.3
Col8a1Q00780 Gm28140-201ENSMUST00000190148 1271 ntTSL 5 BASIC6.93□□□□□ -1.3
Col8a1Q00780 Gm2447-201ENSMUST00000191954 544 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Col8a1Q00780 Gm40319-201ENSMUST00000199785 481 ntBASIC6.93□□□□□ -1.3
Col8a1Q00780 Vmn1r-ps6-201ENSMUST00000201079 934 ntBASIC6.93□□□□□ -1.3
Col8a1Q00780 1700040L08Rik-201ENSMUST00000205011 541 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Col8a1Q00780 Gm4536-201ENSMUST00000209157 542 ntBASIC6.93□□□□□ -1.3
Col8a1Q00780 Gm45589-201ENSMUST00000209366 895 ntTSL 3 BASIC6.93□□□□□ -1.3
Col8a1Q00780 Gm45674-201ENSMUST00000210043 450 ntBASIC6.93□□□□□ -1.3
Col8a1Q00780 Thyn1-203ENSMUST00000213770 775 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Col8a1Q00780 4930543K20Rik-201ENSMUST00000217044 355 ntBASIC6.93□□□□□ -1.3
Col8a1Q00780 AC153516.1-201ENSMUST00000217955 779 ntBASIC6.93□□□□□ -1.3
Col8a1Q00780 Asf1a-204ENSMUST00000219271 725 ntTSL 5 BASIC6.93□□□□□ -1.3
Col8a1Q00780 AC121569.2-201ENSMUST00000222557 574 ntTSL 2 BASIC6.93□□□□□ -1.3
Col8a1Q00780 CT010575.2-201ENSMUST00000222876 496 ntTSL 2 BASIC6.93□□□□□ -1.3
Col8a1Q00780 Vmn1r39-202ENSMUST00000226783 918 ntAPPRIS P2 BASIC6.93□□□□□ -1.3
Col8a1Q00780 Vmn1r89-206ENSMUST00000227319 985 ntBASIC6.93□□□□□ -1.3
Col8a1Q00780 AC123658.1-201ENSMUST00000228364 867 ntBASIC6.93□□□□□ -1.3
Col8a1Q00780 AC115735.5-201ENSMUST00000228386 397 ntBASIC6.93□□□□□ -1.3
Col8a1Q00780 Tipin-201ENSMUST00000034964 1211 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Col8a1Q00780 Ssxb1-201ENSMUST00000037297 875 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Col8a1Q00780 Fgfbp1-201ENSMUST00000061299 1161 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Col8a1Q00780 Trex1-201ENSMUST00000061973 1084 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Col8a1Q00780 Mup4-201ENSMUST00000075973 922 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Col8a1Q00780 Vmn1r232-201ENSMUST00000077001 1159 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
Col8a1Q00780 Gm10697-201ENSMUST00000091692 1023 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
Col8a1Q00780 Cldn34b3-201ENSMUST00000096389 1077 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Col8a1Q00780 Tdpoz5-201ENSMUST00000098879 1023 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
Col8a1Q00780 Adgrf2-201ENSMUST00000113614 3284 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Col8a1Q00780 Lingo2-204ENSMUST00000108124 2414 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Col8a1Q00780 Gm4451-201ENSMUST00000186000 1891 ntBASIC6.93□□□□□ -1.3
Col8a1Q00780 Gm15731-201ENSMUST00000146887 2195 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Col8a1Q00780 Fgfbp1-202ENSMUST00000199481 2191 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
Col8a1Q00780 Cd99l2-201ENSMUST00000037391 3600 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
Col8a1Q00780 Ptprr-201ENSMUST00000063470 3619 ntAPPRIS P3 TSL 1 (best) BASIC6.93□□□□□ -1.3
Col8a1Q00780 Stag3-201ENSMUST00000048028 4211 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 65.5 ms