Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Gm29636-201ENSMUST00000188149 2169 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Shmt1P50431 Zfp52-201ENSMUST00000079242 2175 ntAPPRIS P1 TSL 3 BASIC8.18□□□□□ -1.1
Shmt1P50431 Mep1a-202ENSMUST00000117137 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
Shmt1P50431 Nfkbiz-203ENSMUST00000114457 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
Shmt1P50431 Olfr1006-201ENSMUST00000099917 1529 ntAPPRIS P1 TSL 2 BASIC8.18□□□□□ -1.1
Shmt1P50431 Olfr1157-201ENSMUST00000099841 4621 ntAPPRIS P1 TSL 2 BASIC8.18□□□□□ -1.1
Shmt1P50431 AC168056.4-201ENSMUST00000223835 2567 ntBASIC8.17□□□□□ -1.1
Shmt1P50431 Trub1-201ENSMUST00000026072 4300 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Shmt1P50431 Ms4a6b-205ENSMUST00000163078 2680 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
Shmt1P50431 C130071C03Rik-201ENSMUST00000131907 3590 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Shmt1P50431 Abi1-212ENSMUST00000153931 2729 ntAPPRIS ALT1 TSL 5 BASIC8.17□□□□□ -1.1
Shmt1P50431 4930447C04Rik-208ENSMUST00000136075 1970 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Shmt1P50431 Ephx2-202ENSMUST00000224698 1985 ntBASIC8.17□□□□□ -1.1
Shmt1P50431 Atf2-201ENSMUST00000055833 4210 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
Shmt1P50431 Ifit1bl2-202ENSMUST00000112463 3217 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Shmt1P50431 Zfp770-201ENSMUST00000050668 4300 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Shmt1P50431 Rufy3-207ENSMUST00000199312 2182 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Shmt1P50431 Gm26429-201ENSMUST00000104829 110 ntBASIC8.17□□□□□ -1.1
Shmt1P50431 Gm9493-201ENSMUST00000104916 579 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
Shmt1P50431 Gm6461-201ENSMUST00000120015 633 ntBASIC8.17□□□□□ -1.1
Shmt1P50431 Gm8624-202ENSMUST00000165677 669 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Shmt1P50431 Svs3a-201ENSMUST00000017147 1191 ntAPPRIS P3 TSL 1 (best) BASIC8.17□□□□□ -1.1
Shmt1P50431 Gm22408-201ENSMUST00000174925 65 ntBASIC8.17□□□□□ -1.1
Shmt1P50431 Scgb2a2-201ENSMUST00000179814 1107 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
Shmt1P50431 Gm19585-201ENSMUST00000186007 587 ntTSL 2 BASIC8.17□□□□□ -1.1
Shmt1P50431 Ighv10-4-201ENSMUST00000193702 299 ntBASIC8.17□□□□□ -1.1
Shmt1P50431 4933403L11Rik-201ENSMUST00000193857 1121 ntBASIC8.17□□□□□ -1.1
Shmt1P50431 Gm44387-201ENSMUST00000196298 145 ntBASIC8.17□□□□□ -1.1
Shmt1P50431 Gm18484-201ENSMUST00000204389 991 ntBASIC8.17□□□□□ -1.1
Shmt1P50431 1700047G07Rik-202ENSMUST00000212351 842 ntTSL 5 BASIC8.17□□□□□ -1.1
Shmt1P50431 Tmem156-206ENSMUST00000212640 1271 ntTSL 5 BASIC8.17□□□□□ -1.1
Shmt1P50431 AC160966.1-203ENSMUST00000214689 1186 ntTSL 5 BASIC8.17□□□□□ -1.1
Shmt1P50431 Gm4668-201ENSMUST00000214742 943 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Shmt1P50431 Gm40853-201ENSMUST00000221342 582 ntBASIC8.17□□□□□ -1.1
Shmt1P50431 AC123920.1-201ENSMUST00000221449 384 ntBASIC8.17□□□□□ -1.1
Shmt1P50431 Gm9255-201ENSMUST00000223225 581 ntBASIC8.17□□□□□ -1.1
Shmt1P50431 Zmym2-202ENSMUST00000223669 1281 ntBASIC8.17□□□□□ -1.1
Shmt1P50431 Chn1-201ENSMUST00000070579 1023 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Shmt1P50431 Rpl27a-ps1-201ENSMUST00000075382 448 ntBASIC8.17□□□□□ -1.1
Shmt1P50431 1700011I03Rik-201ENSMUST00000079738 1013 ntAPPRIS P3 TSL 1 (best) BASIC8.17□□□□□ -1.1
Shmt1P50431 Olfr1338-201ENSMUST00000084315 942 ntAPPRIS P2 BASIC8.17□□□□□ -1.1
Shmt1P50431 AC126806.1-201ENSMUST00000217349 3869 ntTSL 5 BASIC8.17□□□□□ -1.1
Shmt1P50431 Map1b-201ENSMUST00000064762 11808 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Shmt1P50431 AC124675.1-201ENSMUST00000226263 1390 ntBASIC8.17□□□□□ -1.1
Shmt1P50431 C130083A15Rik-201ENSMUST00000205707 1460 ntBASIC8.17□□□□□ -1.1
Shmt1P50431 E330035G20Rik-201ENSMUST00000221094 3002 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Shmt1P50431 Mtm1-206ENSMUST00000114621 3257 ntTSL 5 BASIC8.17□□□□□ -1.1
Shmt1P50431 Elavl4-207ENSMUST00000106603 3761 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Shmt1P50431 Tmed5-201ENSMUST00000002837 3800 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Shmt1P50431 Olfr1414-201ENSMUST00000062353 6017 ntAPPRIS P1 TSL 2 BASIC8.17□□□□□ -1.1
Shmt1P50431 Rab2b-202ENSMUST00000100631 2619 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Shmt1P50431 Cd300lb-201ENSMUST00000106581 2880 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Shmt1P50431 Prdx6b-201ENSMUST00000057072 2885 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
Shmt1P50431 Dsc3-203ENSMUST00000225110 3123 ntAPPRIS P2 BASIC8.16□□□□□ -1.1
Shmt1P50431 Cdh8-207ENSMUST00000155527 3159 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Shmt1P50431 Galnt7-202ENSMUST00000110316 3413 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
Shmt1P50431 Rab39b-201ENSMUST00000033545 3401 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Shmt1P50431 Ephb2-202ENSMUST00000105845 10902 ntAPPRIS P3 TSL 1 (best) BASIC8.16□□□□□ -1.1
Shmt1P50431 Aldh1l2-201ENSMUST00000020497 6027 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Shmt1P50431 Cdk6-202ENSMUST00000165117 11525 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Shmt1P50431 Gm23484-201ENSMUST00000104178 131 ntBASIC8.16□□□□□ -1.1
Shmt1P50431 Spag11b-202ENSMUST00000110767 1740 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Shmt1P50431 Kcnj15-208ENSMUST00000113862 5705 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Shmt1P50431 Mageb8-ps-201ENSMUST00000117228 1033 ntBASIC8.16□□□□□ -1.1
Shmt1P50431 Gm14509-201ENSMUST00000117312 1286 ntBASIC8.16□□□□□ -1.1
Shmt1P50431 Gm7910-201ENSMUST00000117896 835 ntBASIC8.16□□□□□ -1.1
Shmt1P50431 n-R5s47-201ENSMUST00000122516 119 ntBASIC8.16□□□□□ -1.1
Shmt1P50431 Gm3669-201ENSMUST00000126712 1846 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Shmt1P50431 Gm2165-202ENSMUST00000129963 1846 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Shmt1P50431 Gm11934-201ENSMUST00000132553 1536 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Shmt1P50431 Gm2101-203ENSMUST00000133794 1846 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Shmt1P50431 Gm14040-201ENSMUST00000139058 697 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Shmt1P50431 Gm2117-203ENSMUST00000147993 1846 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Shmt1P50431 Gm11639-201ENSMUST00000148007 3613 ntTSL 5 BASIC8.16□□□□□ -1.1
Shmt1P50431 Gm22687-201ENSMUST00000158301 105 ntBASIC8.16□□□□□ -1.1
Shmt1P50431 Fxyd5-207ENSMUST00000161684 1172 ntAPPRIS P3 TSL 1 (best) BASIC8.16□□□□□ -1.1
Shmt1P50431 Gm17555-201ENSMUST00000164042 1113 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
Shmt1P50431 Tph1-205ENSMUST00000168335 578 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Shmt1P50431 Gm3344-201ENSMUST00000169610 603 ntBASIC8.16□□□□□ -1.1
Shmt1P50431 Gm25026-201ENSMUST00000175017 188 ntBASIC8.16□□□□□ -1.1
Shmt1P50431 Hist2h2bb-201ENSMUST00000177113 381 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
Shmt1P50431 9430065F17Rik-202ENSMUST00000180908 1084 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Shmt1P50431 4833412C05Rik-201ENSMUST00000181235 1083 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Shmt1P50431 Gm27595-201ENSMUST00000184579 112 ntBASIC8.16□□□□□ -1.1
Shmt1P50431 Mir7005-201ENSMUST00000185089 69 ntBASIC8.16□□□□□ -1.1
Shmt1P50431 Gm29355-201ENSMUST00000188178 697 ntBASIC8.16□□□□□ -1.1
Shmt1P50431 Gm28953-201ENSMUST00000188336 697 ntBASIC8.16□□□□□ -1.1
Shmt1P50431 1700122H20Rik-201ENSMUST00000188950 421 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Shmt1P50431 Gm28140-201ENSMUST00000190148 1271 ntTSL 5 BASIC8.16□□□□□ -1.1
Shmt1P50431 Gm20788-201ENSMUST00000190538 697 ntBASIC8.16□□□□□ -1.1
Shmt1P50431 Gm37395-201ENSMUST00000194721 697 ntBASIC8.16□□□□□ -1.1
Shmt1P50431 Gm37245-201ENSMUST00000195137 2713 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Shmt1P50431 Gm37585-201ENSMUST00000195440 280 ntBASIC8.16□□□□□ -1.1
Shmt1P50431 Gm37440-202ENSMUST00000195572 1227 ntTSL 5 BASIC8.16□□□□□ -1.1
Shmt1P50431 Gm43776-201ENSMUST00000199729 2914 ntBASIC8.16□□□□□ -1.1
Shmt1P50431 Gm44228-201ENSMUST00000204888 2026 ntBASIC8.16□□□□□ -1.1
Shmt1P50431 Gm8575-201ENSMUST00000210262 521 ntBASIC8.16□□□□□ -1.1
Shmt1P50431 Olfr686-202ENSMUST00000214147 2646 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
Shmt1P50431 Olfr686-203ENSMUST00000216143 2612 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
Shmt1P50431 AC158595.1-201ENSMUST00000217989 1435 ntBASIC8.16□□□□□ -1.1
Retrieved 100 of 76,532 protein–RNA pairs in 84 ms