Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Ighv11-2-201ENSMUST00000103468 461 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Hmgb3O54879 Rgs8-205ENSMUST00000111815 765 ntTSL 5 BASIC6.19□□□□□ -1.42
Hmgb3O54879 A930104D05Rik-201ENSMUST00000128601 939 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Hmgb3O54879 Gm13389-201ENSMUST00000142774 639 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Hmgb3O54879 Gm13965-201ENSMUST00000154834 576 ntTSL 3 BASIC6.19□□□□□ -1.42
Hmgb3O54879 Gm26040-201ENSMUST00000158147 161 ntBASIC6.19□□□□□ -1.42
Hmgb3O54879 Gm24325-201ENSMUST00000175344 74 ntBASIC6.19□□□□□ -1.42
Hmgb3O54879 Krtap22-2-201ENSMUST00000178913 380 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Hmgb3O54879 Gm29362-201ENSMUST00000187898 133 ntBASIC6.19□□□□□ -1.42
Hmgb3O54879 Gm3116-201ENSMUST00000189440 1116 ntBASIC6.19□□□□□ -1.42
Hmgb3O54879 Gm42525-201ENSMUST00000196257 527 ntBASIC6.19□□□□□ -1.42
Hmgb3O54879 Gm19211-201ENSMUST00000200251 1206 ntBASIC6.19□□□□□ -1.42
Hmgb3O54879 Gm31698-201ENSMUST00000214227 430 ntTSL 2 BASIC6.19□□□□□ -1.42
Hmgb3O54879 AC155259.1-201ENSMUST00000214794 477 ntBASIC6.19□□□□□ -1.42
Hmgb3O54879 Olfr960-203ENSMUST00000216584 1148 ntAPPRIS ALT2 TSL 3 BASIC6.19□□□□□ -1.42
Hmgb3O54879 AC155644.1-201ENSMUST00000218527 890 ntTSL 5 BASIC6.19□□□□□ -1.42
Hmgb3O54879 Gm4120-201ENSMUST00000220456 578 ntBASIC6.19□□□□□ -1.42
Hmgb3O54879 AC125223.1-201ENSMUST00000224004 749 ntBASIC6.19□□□□□ -1.42
Hmgb3O54879 CT030135.2-201ENSMUST00000225255 893 ntBASIC6.19□□□□□ -1.42
Hmgb3O54879 AC124736.1-201ENSMUST00000226382 419 ntBASIC6.19□□□□□ -1.42
Hmgb3O54879 Olfr448-201ENSMUST00000058668 933 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Hmgb3O54879 Olfr960-201ENSMUST00000077060 1067 ntAPPRIS P2 BASIC6.19□□□□□ -1.42
Hmgb3O54879 Ppfibp2-202ENSMUST00000098134 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Hmgb3O54879 Gm13986-202ENSMUST00000148587 3469 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Hmgb3O54879 Vmn1r51-201ENSMUST00000072859 2567 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Hmgb3O54879 1110008L16Rik-202ENSMUST00000183475 2204 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
Hmgb3O54879 Olfr1045-202ENSMUST00000215763 2960 ntAPPRIS P1 TSL 3 BASIC6.19□□□□□ -1.42
Hmgb3O54879 Gm6101-201ENSMUST00000195384 1867 ntBASIC6.19□□□□□ -1.42
Hmgb3O54879 Ugt2b37-201ENSMUST00000075858 1894 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Hmgb3O54879 Gm12185-201ENSMUST00000059930 5252 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Hmgb3O54879 9330199G10Rik-201ENSMUST00000221601 2072 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Hmgb3O54879 Olfr212-202ENSMUST00000218028 2291 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Hmgb3O54879 Gucy1b3-201ENSMUST00000029635 3223 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Hmgb3O54879 Tmc2-201ENSMUST00000077988 3216 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Hmgb3O54879 D5Ertd577e-202ENSMUST00000202481 2469 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Hmgb3O54879 Smok3c-202ENSMUST00000178402 1515 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Hmgb3O54879 Ccdc83-201ENSMUST00000040413 1546 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
Hmgb3O54879 Gm37161-201ENSMUST00000191994 2697 ntBASIC6.19□□□□□ -1.42
Hmgb3O54879 Ppp1r3b-201ENSMUST00000070481 4221 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Hmgb3O54879 Vmn1r218-203ENSMUST00000227050 10364 ntAPPRIS P2 BASIC6.19□□□□□ -1.42
Hmgb3O54879 Prrc2c-210ENSMUST00000182660 11502 ntAPPRIS P2 TSL 5 BASIC6.19□□□□□ -1.42
Hmgb3O54879 Zbtb18-206ENSMUST00000193480 3734 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Hmgb3O54879 Gm44834-201ENSMUST00000206671 1396 ntBASIC6.18□□□□□ -1.42
Hmgb3O54879 Gm5622-201ENSMUST00000096170 1581 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Hmgb3O54879 Usp17ld-201ENSMUST00000073394 1987 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Hmgb3O54879 Gm15097-201ENSMUST00000101180 2029 ntAPPRIS P2 TSL 5 BASIC6.18□□□□□ -1.42
Hmgb3O54879 Gm15127-201ENSMUST00000101186 2026 ntAPPRIS P2 TSL 5 BASIC6.18□□□□□ -1.42
Hmgb3O54879 Gm15091-201ENSMUST00000112740 2026 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Hmgb3O54879 Gm15107-201ENSMUST00000112796 2028 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Hmgb3O54879 Gm15080-201ENSMUST00000112804 2029 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Hmgb3O54879 Gm15109-201ENSMUST00000133085 2026 ntBASIC6.18□□□□□ -1.42
Hmgb3O54879 Ott-201ENSMUST00000177554 2028 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Hmgb3O54879 Ott-202ENSMUST00000177606 2028 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Hmgb3O54879 Gm15085-201ENSMUST00000178169 2028 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Hmgb3O54879 Ott-203ENSMUST00000179348 2028 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Hmgb3O54879 AC121942.3-201ENSMUST00000225768 1436 ntBASIC6.18□□□□□ -1.42
Hmgb3O54879 Psmd10-201ENSMUST00000033805 1430 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
Hmgb3O54879 Rbfox1-201ENSMUST00000056416 4084 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Hmgb3O54879 Tnik-215ENSMUST00000162777 3894 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
Hmgb3O54879 Slc22a8-201ENSMUST00000010251 3478 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Hmgb3O54879 Olfr90-203ENSMUST00000215195 3060 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Hmgb3O54879 Zranb3-203ENSMUST00000112538 4741 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Hmgb3O54879 Il5ra-203ENSMUST00000205004 2271 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Hmgb3O54879 Gm38009-201ENSMUST00000194884 3341 ntBASIC6.18□□□□□ -1.42
Hmgb3O54879 Olfr480-202ENSMUST00000217653 1876 ntAPPRIS P1 TSL 3 BASIC6.18□□□□□ -1.42
Hmgb3O54879 Xlr5c-202ENSMUST00000114503 1656 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Hmgb3O54879 Gm34184-201ENSMUST00000216477 2713 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Hmgb3O54879 Gm16140-201ENSMUST00000117191 1060 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Hmgb3O54879 Sycn-201ENSMUST00000119180 556 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Hmgb3O54879 Gm12170-201ENSMUST00000119281 300 ntBASIC6.18□□□□□ -1.42
Hmgb3O54879 Gm13921-201ENSMUST00000119411 463 ntBASIC6.18□□□□□ -1.42
Hmgb3O54879 Gm5909-201ENSMUST00000119768 1281 ntBASIC6.18□□□□□ -1.42
Hmgb3O54879 Gm11955-201ENSMUST00000119801 470 ntBASIC6.18□□□□□ -1.42
Hmgb3O54879 Mup-ps24-201ENSMUST00000119939 286 ntBASIC6.18□□□□□ -1.42
Hmgb3O54879 Gm12870-201ENSMUST00000121383 1016 ntBASIC6.18□□□□□ -1.42
Hmgb3O54879 Gm13586-201ENSMUST00000121784 464 ntBASIC6.18□□□□□ -1.42
Hmgb3O54879 Gm11953-201ENSMUST00000122352 1003 ntBASIC6.18□□□□□ -1.42
Hmgb3O54879 Rptoros-201ENSMUST00000127450 1174 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Hmgb3O54879 Olfr636-ps1-201ENSMUST00000134827 935 ntBASIC6.18□□□□□ -1.42
Hmgb3O54879 2310040G07Rik-202ENSMUST00000145897 462 ntTSL 3 BASIC6.18□□□□□ -1.42
Hmgb3O54879 Platr14-205ENSMUST00000146553 770 ntTSL 2 BASIC6.18□□□□□ -1.42
Hmgb3O54879 Rpl29-203ENSMUST00000150576 733 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Hmgb3O54879 Ttc9c-204ENSMUST00000153281 1192 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Hmgb3O54879 Psd3-211ENSMUST00000178529 828 ntTSL 5 BASIC6.18□□□□□ -1.42
Hmgb3O54879 Gm28115-201ENSMUST00000188985 360 ntBASIC6.18□□□□□ -1.42
Hmgb3O54879 1700036G14Rik-201ENSMUST00000189046 542 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Hmgb3O54879 Gm38087-201ENSMUST00000193653 265 ntTSL 5 BASIC6.18□□□□□ -1.42
Hmgb3O54879 Gm10522-201ENSMUST00000194503 1163 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Hmgb3O54879 Gm43840-201ENSMUST00000199444 484 ntBASIC6.18□□□□□ -1.42
Hmgb3O54879 Gm36241-201ENSMUST00000201085 493 ntTSL 3 BASIC6.18□□□□□ -1.42
Hmgb3O54879 Gm43461-201ENSMUST00000202351 996 ntBASIC6.18□□□□□ -1.42
Hmgb3O54879 Reg1-202ENSMUST00000204601 766 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Hmgb3O54879 Reg1-203ENSMUST00000204687 904 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Hmgb3O54879 A930014E10Rik-201ENSMUST00000205115 546 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Hmgb3O54879 Gm34225-203ENSMUST00000206921 572 ntTSL 5 BASIC6.18□□□□□ -1.42
Hmgb3O54879 Gm8268-201ENSMUST00000209683 458 ntBASIC6.18□□□□□ -1.42
Hmgb3O54879 Dppa5b-201ENSMUST00000214261 348 ntBASIC6.18□□□□□ -1.42
Hmgb3O54879 Dppa5c-201ENSMUST00000216268 348 ntBASIC6.18□□□□□ -1.42
Hmgb3O54879 AC158239.1-201ENSMUST00000216890 779 ntTSL 5 BASIC6.18□□□□□ -1.42
Hmgb3O54879 AC166078.1-201ENSMUST00000217211 584 ntTSL 2 BASIC6.18□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 60.1 ms