Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Gm7560-201ENSMUST00000187748 873 ntBASIC7.4□□□□□ -1.22
Clrn1Q8K445 Gm3476-203ENSMUST00000190582 612 ntTSL 5 BASIC7.4□□□□□ -1.22
Clrn1Q8K445 Gm28266-201ENSMUST00000191410 439 ntBASIC7.4□□□□□ -1.22
Clrn1Q8K445 Gm17970-201ENSMUST00000192199 685 ntBASIC7.4□□□□□ -1.22
Clrn1Q8K445 4930565D16Rik-201ENSMUST00000192777 1112 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Clrn1Q8K445 Gm7631-201ENSMUST00000196935 1100 ntBASIC7.4□□□□□ -1.22
Clrn1Q8K445 Gm42959-201ENSMUST00000202184 212 ntBASIC7.4□□□□□ -1.22
Clrn1Q8K445 Gm44137-201ENSMUST00000203670 367 ntBASIC7.4□□□□□ -1.22
Clrn1Q8K445 Gm4536-201ENSMUST00000209157 542 ntBASIC7.4□□□□□ -1.22
Clrn1Q8K445 Gm45672-201ENSMUST00000209700 768 ntTSL 3 BASIC7.4□□□□□ -1.22
Clrn1Q8K445 Gm19073-201ENSMUST00000219978 555 ntBASIC7.4□□□□□ -1.22
Clrn1Q8K445 Gm21321-201ENSMUST00000220179 446 ntBASIC7.4□□□□□ -1.22
Clrn1Q8K445 Gm36862-202ENSMUST00000222758 1051 ntTSL 5 BASIC7.4□□□□□ -1.22
Clrn1Q8K445 Msmb-201ENSMUST00000022464 562 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Clrn1Q8K445 CT009733.1-202ENSMUST00000224941 441 ntBASIC7.4□□□□□ -1.22
Clrn1Q8K445 Krtap3-1-201ENSMUST00000055502 604 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
Clrn1Q8K445 Pcp4-201ENSMUST00000061739 641 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Clrn1Q8K445 Lyrm2-201ENSMUST00000062802 465 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Clrn1Q8K445 Rnase9-201ENSMUST00000064214 1189 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Clrn1Q8K445 Prelid2-201ENSMUST00000070949 724 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Clrn1Q8K445 Tdgf1-ps2-201ENSMUST00000074412 505 ntBASIC7.4□□□□□ -1.22
Clrn1Q8K445 Mup2-201ENSMUST00000074700 927 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Clrn1Q8K445 Mup7-201ENSMUST00000079697 927 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.22
Clrn1Q8K445 Mup19-201ENSMUST00000080606 927 ntAPPRIS P2 TSL 1 (best) BASIC7.4□□□□□ -1.22
Clrn1Q8K445 H2al1j-201ENSMUST00000091180 330 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
Clrn1Q8K445 Hipk1-202ENSMUST00000106845 3967 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Clrn1Q8K445 Ocln-202ENSMUST00000069756 4052 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Clrn1Q8K445 Fancd2os-201ENSMUST00000035870 1358 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Clrn1Q8K445 Fv1-201ENSMUST00000094481 1380 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
Clrn1Q8K445 Peak1-204ENSMUST00000188142 7524 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.22
Clrn1Q8K445 Gm16427-203ENSMUST00000201432 2042 ntAPPRIS P5 TSL 1 (best) BASIC7.4□□□□□ -1.23
Clrn1Q8K445 Gm44550-201ENSMUST00000207311 2058 ntBASIC7.4□□□□□ -1.23
Clrn1Q8K445 Lilra5-201ENSMUST00000117550 2109 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
Clrn1Q8K445 Frmpd4-202ENSMUST00000112146 8153 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.23
Clrn1Q8K445 Paqr7-202ENSMUST00000095074 3550 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
Clrn1Q8K445 Gm20745-201ENSMUST00000216827 3796 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
Clrn1Q8K445 Sema6a-206ENSMUST00000135790 4339 ntTSL 5 BASIC7.4□□□□□ -1.23
Clrn1Q8K445 Mphosph9-211ENSMUST00000184951 5008 ntAPPRIS ALT2 TSL 5 BASIC7.4□□□□□ -1.23
Clrn1Q8K445 Iqch-206ENSMUST00000171243 3099 ntAPPRIS ALT2 TSL 5 BASIC7.39□□□□□ -1.23
Clrn1Q8K445 Cd300lb-203ENSMUST00000149663 2641 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Clrn1Q8K445 Mr1-201ENSMUST00000027744 2512 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Clrn1Q8K445 Patl2-201ENSMUST00000028665 2434 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Clrn1Q8K445 Cks1brt-201ENSMUST00000076896 2301 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
Clrn1Q8K445 Pinc-201ENSMUST00000190229 2170 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Clrn1Q8K445 Gm43621-201ENSMUST00000202733 2022 ntBASIC7.39□□□□□ -1.23
Clrn1Q8K445 4933402E13Rik-201ENSMUST00000051414 1970 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Clrn1Q8K445 Igsf1-203ENSMUST00000114891 1761 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Clrn1Q8K445 Npffr2-201ENSMUST00000048557 1643 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Clrn1Q8K445 Mapk1ip1l-202ENSMUST00000166743 4542 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Clrn1Q8K445 Xlr5a-203ENSMUST00000114521 1474 ntTSL 5 BASIC7.39□□□□□ -1.23
Clrn1Q8K445 4933406K04Rik-203ENSMUST00000135423 1391 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Clrn1Q8K445 Fcgr3-201ENSMUST00000164044 1347 ntAPPRIS P2 TSL 1 (best) BASIC7.39□□□□□ -1.23
Clrn1Q8K445 Efcab9-202ENSMUST00000109377 615 ntAPPRIS ALT2 TSL 3 BASIC7.39□□□□□ -1.23
Clrn1Q8K445 Ghrh-202ENSMUST00000109536 503 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Clrn1Q8K445 Gm10651-201ENSMUST00000118212 609 ntBASIC7.39□□□□□ -1.23
Clrn1Q8K445 Gm13702-201ENSMUST00000118542 825 ntBASIC7.39□□□□□ -1.23
Clrn1Q8K445 Gm16276-201ENSMUST00000131218 262 ntBASIC7.39□□□□□ -1.23
Clrn1Q8K445 Gm11292-201ENSMUST00000146121 1153 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Clrn1Q8K445 Gm10660-201ENSMUST00000148610 1203 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Clrn1Q8K445 Gm13012-202ENSMUST00000155349 849 ntTSL 2 BASIC7.39□□□□□ -1.23
Clrn1Q8K445 Gm22424-201ENSMUST00000158527 87 ntBASIC7.39□□□□□ -1.23
Clrn1Q8K445 Pitpnm2os2-202ENSMUST00000162577 744 ntTSL 3 BASIC7.39□□□□□ -1.23
Clrn1Q8K445 Gm16103-201ENSMUST00000163003 1279 ntBASIC7.39□□□□□ -1.23
Clrn1Q8K445 Gm8893-201ENSMUST00000172146 1242 ntBASIC7.39□□□□□ -1.23
Clrn1Q8K445 Gm20417-201ENSMUST00000174784 425 ntTSL 5 BASIC7.39□□□□□ -1.23
Clrn1Q8K445 4930535O05Rik-201ENSMUST00000184406 419 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Clrn1Q8K445 Gm8282-201ENSMUST00000187559 483 ntBASIC7.39□□□□□ -1.23
Clrn1Q8K445 2610016A17Rik-203ENSMUST00000188711 515 ntTSL 2 BASIC7.39□□□□□ -1.23
Clrn1Q8K445 Gm28140-201ENSMUST00000190148 1271 ntTSL 5 BASIC7.39□□□□□ -1.23
Clrn1Q8K445 Olfr1228-201ENSMUST00000190757 1094 ntAPPRIS P2 BASIC7.39□□□□□ -1.23
Clrn1Q8K445 Gm28548-201ENSMUST00000191599 409 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Clrn1Q8K445 Gm43560-201ENSMUST00000198100 773 ntBASIC7.39□□□□□ -1.23
Clrn1Q8K445 Gm44285-201ENSMUST00000203557 940 ntBASIC7.39□□□□□ -1.23
Clrn1Q8K445 Lsm5-205ENSMUST00000203958 416 ntTSL 3 BASIC7.39□□□□□ -1.23
Clrn1Q8K445 Gm34701-201ENSMUST00000204213 849 ntBASIC7.39□□□□□ -1.23
Clrn1Q8K445 Olfr1315-ps1-201ENSMUST00000207542 1230 ntAPPRIS P5 TSL 5 BASIC7.39□□□□□ -1.23
Clrn1Q8K445 Scoc-209ENSMUST00000212905 798 ntAPPRIS P3 TSL 3 BASIC7.39□□□□□ -1.23
Clrn1Q8K445 2700097O09Rik-201ENSMUST00000021406 1105 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Clrn1Q8K445 Gm18899-201ENSMUST00000217663 546 ntBASIC7.39□□□□□ -1.23
Clrn1Q8K445 Gm3213-201ENSMUST00000219296 441 ntBASIC7.39□□□□□ -1.23
Clrn1Q8K445 AC132587.1-201ENSMUST00000220562 166 ntBASIC7.39□□□□□ -1.23
Clrn1Q8K445 CT010575.2-201ENSMUST00000222876 496 ntTSL 2 BASIC7.39□□□□□ -1.23
Clrn1Q8K445 AC163667.2-201ENSMUST00000223769 791 ntBASIC7.39□□□□□ -1.23
Clrn1Q8K445 CU024892.1-201ENSMUST00000224869 515 ntBASIC7.39□□□□□ -1.23
Clrn1Q8K445 AC121912.1-201ENSMUST00000227525 1201 ntBASIC7.39□□□□□ -1.23
Clrn1Q8K445 1700111E14Rik-201ENSMUST00000031863 908 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Clrn1Q8K445 Olfr844-201ENSMUST00000054106 930 ntBASIC7.39□□□□□ -1.23
Clrn1Q8K445 Defb34-201ENSMUST00000064475 246 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Clrn1Q8K445 Cytl1-201ENSMUST00000073554 974 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Clrn1Q8K445 Gm24696-201ENSMUST00000083878 134 ntBASIC7.39□□□□□ -1.23
Clrn1Q8K445 Olfr810-201ENSMUST00000091986 1006 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
Clrn1Q8K445 Gm43679-201ENSMUST00000197051 3677 ntBASIC7.39□□□□□ -1.23
Clrn1Q8K445 Trpv5-201ENSMUST00000031901 3243 ntAPPRIS P2 TSL 1 (best) BASIC7.39□□□□□ -1.23
Clrn1Q8K445 Vmn1r176-202ENSMUST00000226319 2930 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
Clrn1Q8K445 Gmeb1-203ENSMUST00000105965 4632 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Clrn1Q8K445 Ctns-202ENSMUST00000108476 2723 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Clrn1Q8K445 Rab2b-202ENSMUST00000100631 2619 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Clrn1Q8K445 Gm232-201ENSMUST00000216549 2559 ntBASIC7.39□□□□□ -1.23
Clrn1Q8K445 Adam2-201ENSMUST00000022618 2551 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Clrn1Q8K445 Klhl41-201ENSMUST00000100050 2529 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms