Protein–RNA interactions for Protein: Q6PEE2

Ctif, CBP80/20-dependent translation initiation factor, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtifQ6PEE2 4930442J19Rik-202ENSMUST00000157058 1721 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
CtifQ6PEE2 Gm24786-201ENSMUST00000157379 109 ntBASIC8.16□□□□□ -1.1
CtifQ6PEE2 Kif6-207ENSMUST00000162854 3528 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
CtifQ6PEE2 Rab1a-206ENSMUST00000163483 2657 ntAPPRIS P2 TSL 1 (best) BASIC8.16□□□□□ -1.1
CtifQ6PEE2 Vmn2r15-201ENSMUST00000167133 2568 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
CtifQ6PEE2 Adam3-209ENSMUST00000171438 2501 ntAPPRIS P1 TSL 2 BASIC8.16□□□□□ -1.1
CtifQ6PEE2 Gm20529-201ENSMUST00000173683 203 ntTSL 5 BASIC8.16□□□□□ -1.1
CtifQ6PEE2 Gm9476-201ENSMUST00000179109 696 ntBASIC8.16□□□□□ -1.1
CtifQ6PEE2 D030068K23Rik-202ENSMUST00000180524 3677 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
CtifQ6PEE2 Gm27224-201ENSMUST00000184749 564 ntTSL 3 BASIC8.16□□□□□ -1.1
CtifQ6PEE2 Gm28478-201ENSMUST00000185802 183 ntBASIC8.16□□□□□ -1.1
CtifQ6PEE2 1700022H16Rik-201ENSMUST00000188935 476 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
CtifQ6PEE2 Gm37867-201ENSMUST00000192066 1059 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
CtifQ6PEE2 Gm31243-201ENSMUST00000197498 632 ntTSL 2 BASIC8.16□□□□□ -1.1
CtifQ6PEE2 Gm42864-201ENSMUST00000198371 1436 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
CtifQ6PEE2 Gm45001-201ENSMUST00000208279 2515 ntBASIC8.16□□□□□ -1.1
CtifQ6PEE2 Gm7836-201ENSMUST00000209730 432 ntBASIC8.16□□□□□ -1.1
CtifQ6PEE2 Olfr960-203ENSMUST00000216584 1148 ntAPPRIS ALT2 TSL 3 BASIC8.16□□□□□ -1.1
CtifQ6PEE2 Gm19688-201ENSMUST00000218652 424 ntBASIC8.16□□□□□ -1.1
CtifQ6PEE2 Gm35135-201ENSMUST00000219885 990 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
CtifQ6PEE2 CT572999.1-201ENSMUST00000220315 1260 ntBASIC8.16□□□□□ -1.1
CtifQ6PEE2 AC140477.3-201ENSMUST00000222271 475 ntTSL 3 BASIC8.16□□□□□ -1.1
CtifQ6PEE2 AC154642.2-201ENSMUST00000223657 2485 ntBASIC8.16□□□□□ -1.1
CtifQ6PEE2 Tmem14a-201ENSMUST00000027064 1261 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
CtifQ6PEE2 Adcy10-201ENSMUST00000027852 5210 ntAPPRIS P2 TSL 1 (best) BASIC8.16□□□□□ -1.1
CtifQ6PEE2 Cul4b-202ENSMUST00000050083 3090 ntAPPRIS P2 TSL 1 (best) BASIC8.16□□□□□ -1.1
CtifQ6PEE2 Prkacb-201ENSMUST00000005164 4001 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
CtifQ6PEE2 Rpsa-ps2-201ENSMUST00000059546 880 ntBASIC8.16□□□□□ -1.1
CtifQ6PEE2 Olfr543-201ENSMUST00000061482 1130 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
CtifQ6PEE2 Slc22a26-201ENSMUST00000065634 2007 ntAPPRIS P2 TSL 1 (best) BASIC8.16□□□□□ -1.1
CtifQ6PEE2 Mdm4-202ENSMUST00000067429 3490 ntAPPRIS P3 TSL 1 (best) BASIC8.16□□□□□ -1.1
CtifQ6PEE2 Olfr960-201ENSMUST00000077060 1067 ntAPPRIS P2 BASIC8.16□□□□□ -1.1
CtifQ6PEE2 Tmc2-201ENSMUST00000077988 3216 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
CtifQ6PEE2 U2surp-201ENSMUST00000078374 3520 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
CtifQ6PEE2 Rnase1-201ENSMUST00000080126 992 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
CtifQ6PEE2 Gm24145-201ENSMUST00000082631 163 ntBASIC8.16□□□□□ -1.1
CtifQ6PEE2 Gm10155-201ENSMUST00000084598 483 ntBASIC8.16□□□□□ -1.1
CtifQ6PEE2 Sipa1l1-201ENSMUST00000053969 7488 ntAPPRIS P3 TSL 5 BASIC8.16□□□□□ -1.1
CtifQ6PEE2 Fbln5-201ENSMUST00000021603 5829 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
CtifQ6PEE2 Met-201ENSMUST00000080469 4140 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
CtifQ6PEE2 Gm31562-201ENSMUST00000213973 2747 ntTSL 5 BASIC8.16□□□□□ -1.1
CtifQ6PEE2 AC129308.1-201ENSMUST00000223800 2309 ntBASIC8.15□□□□□ -1.1
CtifQ6PEE2 Cenpw-202ENSMUST00000216853 4143 ntAPPRIS ALT1 TSL 1 (best) BASIC8.15□□□□□ -1.1
CtifQ6PEE2 Olfr45-202ENSMUST00000214637 6157 ntAPPRIS P1 TSL 3 BASIC8.15□□□□□ -1.1
CtifQ6PEE2 Pcdh15-227ENSMUST00000152655 3860 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
CtifQ6PEE2 Gm44249-201ENSMUST00000204538 1805 ntBASIC8.15□□□□□ -1.1
CtifQ6PEE2 Vmn1r37-205ENSMUST00000227923 1773 ntAPPRIS P2 BASIC8.15□□□□□ -1.1
CtifQ6PEE2 P2ry14-201ENSMUST00000065220 1672 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
CtifQ6PEE2 Slco1c1-201ENSMUST00000032362 3178 ntAPPRIS P2 TSL 1 (best) BASIC8.15□□□□□ -1.1
CtifQ6PEE2 Pnisr-202ENSMUST00000098238 4407 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
CtifQ6PEE2 Gm8005-201ENSMUST00000167326 1401 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
CtifQ6PEE2 Gm45088-201ENSMUST00000207066 1408 ntBASIC8.15□□□□□ -1.1
CtifQ6PEE2 Atp8b4-201ENSMUST00000040128 5693 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
CtifQ6PEE2 Medag-202ENSMUST00000201083 2669 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
CtifQ6PEE2 Vmn2r58-201ENSMUST00000171671 2589 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
CtifQ6PEE2 Gm25594-201ENSMUST00000102274 82 ntBASIC8.15□□□□□ -1.1
CtifQ6PEE2 Mup1-202ENSMUST00000103012 927 ntAPPRIS P3 TSL 1 (best) BASIC8.15□□□□□ -1.1
CtifQ6PEE2 Ccdc47-202ENSMUST00000106865 704 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
CtifQ6PEE2 Mup16-202ENSMUST00000107483 927 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
CtifQ6PEE2 Mup17-201ENSMUST00000107484 927 ntAPPRIS P1 TSL 2 BASIC8.15□□□□□ -1.1
CtifQ6PEE2 Inca1-204ENSMUST00000108543 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
CtifQ6PEE2 Prl8a6-203ENSMUST00000110355 843 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
CtifQ6PEE2 Zfp467-207ENSMUST00000114563 463 ntTSL 5 BASIC8.15□□□□□ -1.1
CtifQ6PEE2 Gm14864-201ENSMUST00000116164 1087 ntBASIC8.15□□□□□ -1.1
CtifQ6PEE2 Olfr1343-ps1-201ENSMUST00000117414 914 ntBASIC8.15□□□□□ -1.1
CtifQ6PEE2 Gm14083-201ENSMUST00000117873 620 ntBASIC8.15□□□□□ -1.1
CtifQ6PEE2 Gm12875-201ENSMUST00000118745 344 ntBASIC8.15□□□□□ -1.1
CtifQ6PEE2 Gm8814-201ENSMUST00000119072 535 ntBASIC8.15□□□□□ -1.1
CtifQ6PEE2 Gm12297-201ENSMUST00000121380 979 ntBASIC8.15□□□□□ -1.1
CtifQ6PEE2 Gm15787-203ENSMUST00000130892 1250 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
CtifQ6PEE2 Gm14010-201ENSMUST00000131961 374 ntTSL 2 BASIC8.15□□□□□ -1.1
CtifQ6PEE2 Tbata-208ENSMUST00000143207 982 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
CtifQ6PEE2 6430503K07Rik-201ENSMUST00000144411 476 ntTSL 2 BASIC8.15□□□□□ -1.1
CtifQ6PEE2 4930579G18Rik-201ENSMUST00000167763 968 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
CtifQ6PEE2 Tcrg-C4-201ENSMUST00000179181 985 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
CtifQ6PEE2 Gm8004-201ENSMUST00000187782 617 ntBASIC8.15□□□□□ -1.1
CtifQ6PEE2 2210420H20Rik-201ENSMUST00000188435 629 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
CtifQ6PEE2 Gm29250-201ENSMUST00000191372 368 ntTSL 5 BASIC8.15□□□□□ -1.1
CtifQ6PEE2 Gm44471-201ENSMUST00000197963 100 ntBASIC8.15□□□□□ -1.1
CtifQ6PEE2 Gm4870-201ENSMUST00000198525 1251 ntBASIC8.15□□□□□ -1.1
CtifQ6PEE2 Reg1-202ENSMUST00000204601 766 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
CtifQ6PEE2 Reg1-203ENSMUST00000204687 904 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
CtifQ6PEE2 Rpl18a-ps4-201ENSMUST00000206176 536 ntBASIC8.15□□□□□ -1.1
CtifQ6PEE2 C230072F16Rik-201ENSMUST00000219184 1253 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
CtifQ6PEE2 Tssk4-203ENSMUST00000226497 1235 ntBASIC8.15□□□□□ -1.1
CtifQ6PEE2 Tssk4-206ENSMUST00000228041 1217 ntBASIC8.15□□□□□ -1.1
CtifQ6PEE2 Mup2-201ENSMUST00000074700 927 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
CtifQ6PEE2 Vmn1r218-201ENSMUST00000074992 897 ntAPPRIS P2 BASIC8.15□□□□□ -1.1
CtifQ6PEE2 Mup7-201ENSMUST00000079697 927 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
CtifQ6PEE2 Mup19-201ENSMUST00000080606 927 ntAPPRIS P2 TSL 1 (best) BASIC8.15□□□□□ -1.1
CtifQ6PEE2 Prl8a6-202ENSMUST00000080762 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
CtifQ6PEE2 Olfr2-201ENSMUST00000094109 1250 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
CtifQ6PEE2 Gm44550-201ENSMUST00000207311 2058 ntBASIC8.15□□□□□ -1.11
CtifQ6PEE2 Gm9894-201ENSMUST00000171257 2904 ntBASIC8.15□□□□□ -1.11
CtifQ6PEE2 Pcyt1b-201ENSMUST00000045898 4888 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
CtifQ6PEE2 Calcrl-201ENSMUST00000074262 4882 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
CtifQ6PEE2 Gm37621-201ENSMUST00000194716 5531 ntBASIC8.15□□□□□ -1.11
CtifQ6PEE2 Gm8276-201ENSMUST00000192231 1812 ntBASIC8.15□□□□□ -1.11
CtifQ6PEE2 AC153132.1-201ENSMUST00000222625 2705 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
CtifQ6PEE2 Olfr374-202ENSMUST00000210435 8718 ntAPPRIS P1 TSL 2 BASIC8.15□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 71.5 ms