Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Gm5759-201ENSMUST00000119203 811 ntBASIC9.16□□□□□ -0.94
Vps54Q5SPW0 Gm12402-201ENSMUST00000120536 334 ntBASIC9.16□□□□□ -0.94
Vps54Q5SPW0 Gm11309-201ENSMUST00000127108 613 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Vps54Q5SPW0 Gm15092-201ENSMUST00000138467 574 ntTSL 5 BASIC9.16□□□□□ -0.94
Vps54Q5SPW0 Zfp652os-201ENSMUST00000155531 537 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Vps54Q5SPW0 Gm16143-201ENSMUST00000155982 538 ntTSL 5 BASIC9.16□□□□□ -0.94
Vps54Q5SPW0 Gm22948-201ENSMUST00000158561 243 ntBASIC9.16□□□□□ -0.94
Vps54Q5SPW0 Zwint-204ENSMUST00000160337 1138 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Vps54Q5SPW0 Gm18254-201ENSMUST00000185699 1204 ntBASIC9.16□□□□□ -0.94
Vps54Q5SPW0 Oosp1-203ENSMUST00000186557 495 ntAPPRIS ALT2 TSL 2 BASIC9.16□□□□□ -0.94
Vps54Q5SPW0 Ly6e-208ENSMUST00000188042 714 ntAPPRIS P1 TSL 3 BASIC9.16□□□□□ -0.94
Vps54Q5SPW0 Plet1-202ENSMUST00000188047 739 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Vps54Q5SPW0 Gm20379-201ENSMUST00000188317 1204 ntAPPRIS P1 BASIC9.16□□□□□ -0.94
Vps54Q5SPW0 Gm29477-201ENSMUST00000189860 499 ntTSL 5 BASIC9.16□□□□□ -0.94
Vps54Q5SPW0 Gm43346-201ENSMUST00000198290 685 ntTSL 2 BASIC9.16□□□□□ -0.94
Vps54Q5SPW0 Gm33248-201ENSMUST00000205836 617 ntTSL 3 BASIC9.16□□□□□ -0.94
Vps54Q5SPW0 Gm44546-201ENSMUST00000208353 368 ntTSL 2 BASIC9.16□□□□□ -0.94
Vps54Q5SPW0 Gm8489-201ENSMUST00000209876 1152 ntBASIC9.16□□□□□ -0.94
Vps54Q5SPW0 Gm19011-201ENSMUST00000221777 808 ntBASIC9.16□□□□□ -0.94
Vps54Q5SPW0 AC069562.1-201ENSMUST00000224206 434 ntBASIC9.16□□□□□ -0.94
Vps54Q5SPW0 4933413J09Rik-201ENSMUST00000022427 899 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Vps54Q5SPW0 AC118249.1-201ENSMUST00000224822 608 ntBASIC9.16□□□□□ -0.94
Vps54Q5SPW0 Wfdc13-201ENSMUST00000088260 1074 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Vps54Q5SPW0 Siglec1-201ENSMUST00000028794 6387 ntAPPRIS P2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Vps54Q5SPW0 Trim16-201ENSMUST00000055006 3906 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Vps54Q5SPW0 Sptan1-201ENSMUST00000046257 7820 ntTSL 5 BASIC9.16□□□□□ -0.94
Vps54Q5SPW0 Grm8-203ENSMUST00000115324 3299 ntAPPRIS P3 TSL 1 (best) BASIC9.16□□□□□ -0.94
Vps54Q5SPW0 Ankrd55-203ENSMUST00000165593 2749 ntAPPRIS ALT2 TSL 5 BASIC9.16□□□□□ -0.94
Vps54Q5SPW0 Unc79-208ENSMUST00000179002 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Vps54Q5SPW0 Olfr376-202ENSMUST00000120401 3342 ntAPPRIS P3 TSL 2 BASIC9.15□□□□□ -0.94
Vps54Q5SPW0 Cxcr6-201ENSMUST00000049810 1897 ntAPPRIS P2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Vps54Q5SPW0 Setd5-203ENSMUST00000113157 6527 ntTSL 5 BASIC9.15□□□□□ -0.94
Vps54Q5SPW0 Ift122-203ENSMUST00000112925 4122 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Vps54Q5SPW0 Vmn1r37-205ENSMUST00000227923 1773 ntAPPRIS P2 BASIC9.15□□□□□ -0.94
Vps54Q5SPW0 Tmcc1-203ENSMUST00000172510 2612 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Vps54Q5SPW0 Gm4951-201ENSMUST00000031549 2645 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Vps54Q5SPW0 Tcf4-207ENSMUST00000114985 8577 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Vps54Q5SPW0 Gm24986-201ENSMUST00000104452 132 ntBASIC9.15□□□□□ -0.94
Vps54Q5SPW0 Gm14584-201ENSMUST00000118956 637 ntBASIC9.15□□□□□ -0.94
Vps54Q5SPW0 Gm12665-201ENSMUST00000126063 541 ntTSL 3 BASIC9.15□□□□□ -0.94
Vps54Q5SPW0 Gm11496-201ENSMUST00000128078 581 ntTSL 2 BASIC9.15□□□□□ -0.94
Vps54Q5SPW0 Olfr636-ps1-201ENSMUST00000134827 935 ntBASIC9.15□□□□□ -0.94
Vps54Q5SPW0 Gm14547-201ENSMUST00000138341 371 ntTSL 5 BASIC9.15□□□□□ -0.94
Vps54Q5SPW0 Gm4340-201ENSMUST00000163113 807 ntAPPRIS ALT2 BASIC9.15□□□□□ -0.94
Vps54Q5SPW0 Gm27008-202ENSMUST00000182414 604 ntTSL 3 BASIC9.15□□□□□ -0.94
Vps54Q5SPW0 Gm27542-201ENSMUST00000184184 256 ntBASIC9.15□□□□□ -0.94
Vps54Q5SPW0 Gm30613-201ENSMUST00000197277 512 ntTSL 3 BASIC9.15□□□□□ -0.94
Vps54Q5SPW0 Gm30504-203ENSMUST00000209762 1048 ntTSL 5 BASIC9.15□□□□□ -0.94
Vps54Q5SPW0 6030440G07Rik-201ENSMUST00000221849 1090 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Vps54Q5SPW0 AC152940.1-201ENSMUST00000226504 139 ntBASIC9.15□□□□□ -0.94
Vps54Q5SPW0 Olfr890-201ENSMUST00000079804 945 ntBASIC9.15□□□□□ -0.94
Vps54Q5SPW0 Pcyt1a-203ENSMUST00000115137 4244 ntTSL 5 BASIC9.15□□□□□ -0.94
Vps54Q5SPW0 Scn11a-202ENSMUST00000215718 5899 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Vps54Q5SPW0 CT010505.3-201ENSMUST00000227835 1651 ntBASIC9.15□□□□□ -0.94
Vps54Q5SPW0 Gm38302-201ENSMUST00000191676 2076 ntBASIC9.15□□□□□ -0.94
Vps54Q5SPW0 9030607J07Rik-201ENSMUST00000202228 1622 ntBASIC9.15□□□□□ -0.94
Vps54Q5SPW0 Gm13262-201ENSMUST00000149014 2022 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Vps54Q5SPW0 Svil-215ENSMUST00000210707 7633 ntAPPRIS ALT2 TSL 5 BASIC9.15□□□□□ -0.94
Vps54Q5SPW0 Tenm1-201ENSMUST00000016294 8365 ntAPPRIS P2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Vps54Q5SPW0 Aadat-202ENSMUST00000209338 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.95
Vps54Q5SPW0 Trappc13-201ENSMUST00000022224 2342 ntAPPRIS P4 TSL 1 (best) BASIC9.15□□□□□ -0.95
Vps54Q5SPW0 Gm21043-201ENSMUST00000199316 1517 ntBASIC9.15□□□□□ -0.95
Vps54Q5SPW0 2900027M19Rik-201ENSMUST00000207411 4448 ntBASIC9.15□□□□□ -0.95
Vps54Q5SPW0 Gm20547-202ENSMUST00000146299 3893 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
Vps54Q5SPW0 Nyap2-202ENSMUST00000113494 4540 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Vps54Q5SPW0 Prps1l1-201ENSMUST00000134550 1676 ntAPPRIS P1 BASIC9.14□□□□□ -0.95
Vps54Q5SPW0 Zfp488-201ENSMUST00000166737 4301 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Vps54Q5SPW0 Kank4os-201ENSMUST00000133455 2251 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Vps54Q5SPW0 Gm29617-206ENSMUST00000187759 1600 ntTSL 5 BASIC9.14□□□□□ -0.95
Vps54Q5SPW0 Gm28749-205ENSMUST00000187886 1600 ntTSL 3 BASIC9.14□□□□□ -0.95
Vps54Q5SPW0 Gm29000-208ENSMUST00000190932 1600 ntTSL 3 BASIC9.14□□□□□ -0.95
Vps54Q5SPW0 Gm45807-201ENSMUST00000209142 2874 ntBASIC9.14□□□□□ -0.95
Vps54Q5SPW0 Gm5761-201ENSMUST00000119238 834 ntBASIC9.14□□□□□ -0.95
Vps54Q5SPW0 Gm15160-201ENSMUST00000120553 907 ntBASIC9.14□□□□□ -0.95
Vps54Q5SPW0 Gm15392-201ENSMUST00000152863 778 ntTSL 3 BASIC9.14□□□□□ -0.95
Vps54Q5SPW0 Clec2i-204ENSMUST00000160867 933 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Vps54Q5SPW0 Clec2i-205ENSMUST00000162666 1091 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Vps54Q5SPW0 Slc29a1-208ENSMUST00000164769 1226 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Vps54Q5SPW0 Gm7991-201ENSMUST00000168668 591 ntBASIC9.14□□□□□ -0.95
Vps54Q5SPW0 Gm6536-201ENSMUST00000171180 615 ntBASIC9.14□□□□□ -0.95
Vps54Q5SPW0 Gm27617-201ENSMUST00000184321 168 ntBASIC9.14□□□□□ -0.95
Vps54Q5SPW0 Mir6972-201ENSMUST00000184774 64 ntBASIC9.14□□□□□ -0.95
Vps54Q5SPW0 1700094M24Rik-201ENSMUST00000203771 665 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Vps54Q5SPW0 Gm5314-201ENSMUST00000204852 466 ntBASIC9.14□□□□□ -0.95
Vps54Q5SPW0 Gm44902-201ENSMUST00000206177 805 ntBASIC9.14□□□□□ -0.95
Vps54Q5SPW0 Gm44621-201ENSMUST00000207643 1166 ntTSL 3 BASIC9.14□□□□□ -0.95
Vps54Q5SPW0 Gm45370-201ENSMUST00000211274 483 ntTSL 5 BASIC9.14□□□□□ -0.95
Vps54Q5SPW0 Gm45900-201ENSMUST00000211879 409 ntBASIC9.14□□□□□ -0.95
Vps54Q5SPW0 AC118006.3-201ENSMUST00000223948 1176 ntBASIC9.14□□□□□ -0.95
Vps54Q5SPW0 AC161537.1-202ENSMUST00000228450 868 ntBASIC9.14□□□□□ -0.95
Vps54Q5SPW0 Clec2i-201ENSMUST00000032519 1014 ntAPPRIS P3 TSL 1 (best) BASIC9.14□□□□□ -0.95
Vps54Q5SPW0 Rps6-ps1-201ENSMUST00000074205 750 ntBASIC9.14□□□□□ -0.95
Vps54Q5SPW0 4921528I07Rik-202ENSMUST00000213446 3798 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Vps54Q5SPW0 Gm17638-201ENSMUST00000181255 4343 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Vps54Q5SPW0 Kansl1-203ENSMUST00000106971 5222 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
Vps54Q5SPW0 BB031773-201ENSMUST00000148892 3655 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Vps54Q5SPW0 Cd44-205ENSMUST00000111191 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Vps54Q5SPW0 Gm42514-201ENSMUST00000196636 1832 ntBASIC9.14□□□□□ -0.95
Vps54Q5SPW0 Frem3-201ENSMUST00000039695 6384 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
Vps54Q5SPW0 Fam60a-209ENSMUST00000203164 2442 ntTSL 5 BASIC9.14□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 53.6 ms