Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 AC166822.2-201ENSMUST00000228746 275 ntBASIC8.13□□□□□ -1.11
Trim43aQ3TL54 1700001C02Rik-201ENSMUST00000031078 731 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Trim43aQ3TL54 Lipk-201ENSMUST00000054260 2125 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Trim43aQ3TL54 Frmd7-201ENSMUST00000060650 2112 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
Trim43aQ3TL54 Frmpd4-201ENSMUST00000112145 7924 ntAPPRIS P3 TSL 1 (best) BASIC8.13□□□□□ -1.11
Trim43aQ3TL54 Afap1l2-203ENSMUST00000122359 3667 ntAPPRIS P3 TSL 1 (best) BASIC8.13□□□□□ -1.11
Trim43aQ3TL54 Gm32389-201ENSMUST00000209312 1621 ntTSL 3 BASIC8.13□□□□□ -1.11
Trim43aQ3TL54 Lpcat2b-201ENSMUST00000166599 2782 ntAPPRIS P1 TSL 3 BASIC8.13□□□□□ -1.11
Trim43aQ3TL54 Slc4a4-208ENSMUST00000156238 3494 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
Trim43aQ3TL54 Gm20609-201ENSMUST00000177104 1527 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Trim43aQ3TL54 AC154257.1-201ENSMUST00000224811 1525 ntBASIC8.13□□□□□ -1.11
Trim43aQ3TL54 Apol10a-202ENSMUST00000119997 2286 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
Trim43aQ3TL54 Olfr115-202ENSMUST00000221552 2295 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
Trim43aQ3TL54 Zfp106-201ENSMUST00000055241 9085 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
Trim43aQ3TL54 Trpm8-202ENSMUST00000113114 4112 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Trim43aQ3TL54 Mfap1b-201ENSMUST00000056732 3362 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Trim43aQ3TL54 C130093G08Rik-201ENSMUST00000202489 2226 ntBASIC8.13□□□□□ -1.11
Trim43aQ3TL54 AC122878.1-201ENSMUST00000227716 1460 ntBASIC8.13□□□□□ -1.11
Trim43aQ3TL54 Pnlip-201ENSMUST00000057270 1485 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Trim43aQ3TL54 Clec1a-202ENSMUST00000203162 5128 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Trim43aQ3TL54 Gm38209-201ENSMUST00000192711 2169 ntTSL 5 BASIC8.12□□□□□ -1.11
Trim43aQ3TL54 Gm37948-201ENSMUST00000192846 2169 ntTSL 5 BASIC8.12□□□□□ -1.11
Trim43aQ3TL54 Gm38028-201ENSMUST00000193309 2169 ntTSL 5 BASIC8.12□□□□□ -1.11
Trim43aQ3TL54 Gm37263-201ENSMUST00000195837 2169 ntTSL 5 BASIC8.12□□□□□ -1.11
Trim43aQ3TL54 Patj-204ENSMUST00000107029 4342 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Trim43aQ3TL54 Uvssa-204ENSMUST00000202816 7165 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Trim43aQ3TL54 Gm26561-201ENSMUST00000180743 1413 ntTSL 5 BASIC8.12□□□□□ -1.11
Trim43aQ3TL54 Trim40-201ENSMUST00000087158 2117 ntAPPRIS P3 TSL 1 (best) BASIC8.12□□□□□ -1.11
Trim43aQ3TL54 Gm45237-202ENSMUST00000211157 2452 ntTSL 5 BASIC8.12□□□□□ -1.11
Trim43aQ3TL54 3110043O21Rik-201ENSMUST00000084724 3413 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Trim43aQ3TL54 Gpm6b-202ENSMUST00000112223 4764 ntAPPRIS ALT1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Trim43aQ3TL54 Bpifc-201ENSMUST00000061699 2714 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Trim43aQ3TL54 Akap13-205ENSMUST00000207750 12597 ntAPPRIS ALT2 TSL 5 BASIC8.12□□□□□ -1.11
Trim43aQ3TL54 Synj2-206ENSMUST00000115787 4013 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Trim43aQ3TL54 Pgbd1-202ENSMUST00000122872 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Trim43aQ3TL54 Hsd11b1-201ENSMUST00000016338 1623 ntAPPRIS P2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Trim43aQ3TL54 Stx8-202ENSMUST00000021286 1638 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Trim43aQ3TL54 Olfr1555-ps1-202ENSMUST00000219261 2918 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Trim43aQ3TL54 Mapk1ip1l-202ENSMUST00000166743 4542 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Trim43aQ3TL54 Gm38244-201ENSMUST00000191737 2586 ntBASIC8.12□□□□□ -1.11
Trim43aQ3TL54 Tek-201ENSMUST00000071168 4176 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Trim43aQ3TL54 Wfdc2-202ENSMUST00000109344 429 ntTSL 3 BASIC8.12□□□□□ -1.11
Trim43aQ3TL54 4930449I24Rik-201ENSMUST00000110598 1168 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Trim43aQ3TL54 1700029I15Rik-202ENSMUST00000111280 416 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Trim43aQ3TL54 Gm13495-201ENSMUST00000121156 537 ntBASIC8.12□□□□□ -1.11
Trim43aQ3TL54 Bloodlinc-201ENSMUST00000126237 679 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Trim43aQ3TL54 Gm16267-201ENSMUST00000140569 732 ntTSL 3 BASIC8.12□□□□□ -1.11
Trim43aQ3TL54 Gm24307-201ENSMUST00000178512 101 ntBASIC8.12□□□□□ -1.11
Trim43aQ3TL54 Gm29243-201ENSMUST00000188318 418 ntTSL 5 BASIC8.12□□□□□ -1.11
Trim43aQ3TL54 Gm45625-201ENSMUST00000209412 650 ntTSL 5 BASIC8.12□□□□□ -1.11
Trim43aQ3TL54 Gm3774-201ENSMUST00000209773 435 ntBASIC8.12□□□□□ -1.11
Trim43aQ3TL54 Gm32842-201ENSMUST00000212653 738 ntBASIC8.12□□□□□ -1.11
Trim43aQ3TL54 Gm31763-201ENSMUST00000217788 673 ntTSL 3 BASIC8.12□□□□□ -1.11
Trim43aQ3TL54 Gm36862-202ENSMUST00000222758 1051 ntTSL 5 BASIC8.12□□□□□ -1.11
Trim43aQ3TL54 AC163041.2-201ENSMUST00000223082 573 ntBASIC8.12□□□□□ -1.11
Trim43aQ3TL54 CT009550.2-201ENSMUST00000228851 399 ntBASIC8.12□□□□□ -1.11
Trim43aQ3TL54 Arhgef38-201ENSMUST00000054105 814 ntTSL 5 BASIC8.12□□□□□ -1.11
Trim43aQ3TL54 Mettl21c-201ENSMUST00000061421 1086 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Trim43aQ3TL54 Mill2-202ENSMUST00000072415 1075 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Trim43aQ3TL54 AC135669.2-201ENSMUST00000215636 4958 ntBASIC8.12□□□□□ -1.11
Trim43aQ3TL54 Dync1i2-204ENSMUST00000112138 2466 ntAPPRIS P3 TSL 1 (best) BASIC8.12□□□□□ -1.11
Trim43aQ3TL54 Gm44116-201ENSMUST00000204269 1525 ntBASIC8.12□□□□□ -1.11
Trim43aQ3TL54 Vwa3a-204ENSMUST00000166668 4409 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Trim43aQ3TL54 Gm44652-201ENSMUST00000208648 2854 ntBASIC8.12□□□□□ -1.11
Trim43aQ3TL54 Atp8b4-201ENSMUST00000040128 5693 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Trim43aQ3TL54 CT009480.1-201ENSMUST00000225771 4480 ntBASIC8.11□□□□□ -1.11
Trim43aQ3TL54 Prdm11-202ENSMUST00000111274 11678 ntTSL 5 BASIC8.11□□□□□ -1.11
Trim43aQ3TL54 Spag9-204ENSMUST00000092777 6913 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Trim43aQ3TL54 Zfp27-206ENSMUST00000172448 2460 ntAPPRIS P1 TSL 3 BASIC8.11□□□□□ -1.11
Trim43aQ3TL54 AC166159.1-201ENSMUST00000227154 1380 ntBASIC8.11□□□□□ -1.11
Trim43aQ3TL54 AC164623.1-201ENSMUST00000217947 2709 ntTSL 5 BASIC8.11□□□□□ -1.11
Trim43aQ3TL54 Gm15462-201ENSMUST00000133653 4580 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Trim43aQ3TL54 Frem1-202ENSMUST00000107230 9690 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
Trim43aQ3TL54 Gm43533-201ENSMUST00000202933 2936 ntBASIC8.11□□□□□ -1.11
Trim43aQ3TL54 Zfp27-201ENSMUST00000053521 3150 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Trim43aQ3TL54 Nppb-201ENSMUST00000103231 781 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Trim43aQ3TL54 Igkv4-72-201ENSMUST00000103346 402 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
Trim43aQ3TL54 Gm23946-201ENSMUST00000104423 197 ntBASIC8.11□□□□□ -1.11
Trim43aQ3TL54 Uqcrq-202ENSMUST00000109019 504 ntTSL 2 BASIC8.11□□□□□ -1.11
Trim43aQ3TL54 Gm12838-201ENSMUST00000116278 325 ntBASIC8.11□□□□□ -1.11
Trim43aQ3TL54 Gm6181-201ENSMUST00000117187 264 ntBASIC8.11□□□□□ -1.11
Trim43aQ3TL54 Defa-ps4-201ENSMUST00000118021 183 ntBASIC8.11□□□□□ -1.11
Trim43aQ3TL54 Gm15753-201ENSMUST00000119241 1062 ntBASIC8.11□□□□□ -1.11
Trim43aQ3TL54 Gm15989-201ENSMUST00000121895 498 ntBASIC8.11□□□□□ -1.11
Trim43aQ3TL54 Tsc22d1-205ENSMUST00000133224 786 ntTSL 2 BASIC8.11□□□□□ -1.11
Trim43aQ3TL54 Crem-218ENSMUST00000139537 807 ntTSL 2 BASIC8.11□□□□□ -1.11
Trim43aQ3TL54 Krr1-204ENSMUST00000174653 972 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
Trim43aQ3TL54 Gm7678-201ENSMUST00000181879 943 ntBASIC8.11□□□□□ -1.11
Trim43aQ3TL54 Gm29041-201ENSMUST00000189199 380 ntBASIC8.11□□□□□ -1.11
Trim43aQ3TL54 Gm29477-201ENSMUST00000189860 499 ntTSL 5 BASIC8.11□□□□□ -1.11
Trim43aQ3TL54 Gm37506-201ENSMUST00000192008 143 ntBASIC8.11□□□□□ -1.11
Trim43aQ3TL54 Gm37623-201ENSMUST00000193691 803 ntTSL 3 BASIC8.11□□□□□ -1.11
Trim43aQ3TL54 Gm37555-201ENSMUST00000195711 542 ntTSL 5 BASIC8.11□□□□□ -1.11
Trim43aQ3TL54 Cnn3-203ENSMUST00000197135 1242 ntTSL 5 BASIC8.11□□□□□ -1.11
Trim43aQ3TL54 Gm43247-201ENSMUST00000198638 481 ntBASIC8.11□□□□□ -1.11
Trim43aQ3TL54 Gm45216-201ENSMUST00000205547 600 ntTSL 3 BASIC8.11□□□□□ -1.11
Trim43aQ3TL54 Smarca2-238ENSMUST00000208589 1054 ntTSL 5 BASIC8.11□□□□□ -1.11
Trim43aQ3TL54 Gm34418-201ENSMUST00000212879 309 ntTSL 5 BASIC8.11□□□□□ -1.11
Trim43aQ3TL54 AC153845.1-201ENSMUST00000213596 428 ntBASIC8.11□□□□□ -1.11
Trim43aQ3TL54 AC153561.1-201ENSMUST00000215943 469 ntBASIC8.11□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms