Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Gm2398-201ENSMUST00000218347 883 ntBASIC6.95□□□□□ -1.3
Col8a1Q00780 Cyp3a61-ps1-201ENSMUST00000218470 592 ntBASIC6.95□□□□□ -1.3
Col8a1Q00780 AC131654.1-201ENSMUST00000219675 745 ntBASIC6.95□□□□□ -1.3
Col8a1Q00780 AC121804.1-201ENSMUST00000221016 394 ntBASIC6.95□□□□□ -1.3
Col8a1Q00780 7420701I03Rik-201ENSMUST00000222157 737 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Col8a1Q00780 CU024892.1-201ENSMUST00000224869 515 ntBASIC6.95□□□□□ -1.3
Col8a1Q00780 AC124715.2-201ENSMUST00000226762 617 ntBASIC6.95□□□□□ -1.3
Col8a1Q00780 Olfr1364-201ENSMUST00000057453 945 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
Col8a1Q00780 Vmn1r193-201ENSMUST00000057516 960 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
Col8a1Q00780 Olfr51-201ENSMUST00000076514 924 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
Col8a1Q00780 Krtap6-1-201ENSMUST00000076906 594 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
Col8a1Q00780 Csn2-201ENSMUST00000082370 1117 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
Col8a1Q00780 Gm10310-201ENSMUST00000095239 963 ntAPPRIS ALT2 BASIC6.95□□□□□ -1.3
Col8a1Q00780 AC122878.1-201ENSMUST00000227716 1460 ntBASIC6.95□□□□□ -1.3
Col8a1Q00780 Gm27048-201ENSMUST00000182891 4627 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Col8a1Q00780 Pld1-202ENSMUST00000120834 4849 ntAPPRIS P2 TSL 1 (best) BASIC6.95□□□□□ -1.3
Col8a1Q00780 Gm4806-201ENSMUST00000222704 1690 ntBASIC6.95□□□□□ -1.3
Col8a1Q00780 Pde1c-205ENSMUST00000166102 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
Col8a1Q00780 Tmem106b-201ENSMUST00000031556 6002 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Col8a1Q00780 Tmem174-201ENSMUST00000050389 2252 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Col8a1Q00780 1600015I10Rik-201ENSMUST00000031837 2485 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Col8a1Q00780 Gm12661-201ENSMUST00000118780 3335 ntBASIC6.95□□□□□ -1.3
Col8a1Q00780 Cwc25-201ENSMUST00000018685 3105 ntAPPRIS P2 TSL 1 (best) BASIC6.95□□□□□ -1.3
Col8a1Q00780 A430110L20Rik-202ENSMUST00000181680 2513 ntBASIC6.95□□□□□ -1.3
Col8a1Q00780 CT025619.2-201ENSMUST00000216975 2312 ntBASIC6.95□□□□□ -1.3
Col8a1Q00780 Plxna2-201ENSMUST00000027952 11040 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Col8a1Q00780 Gm6368-201ENSMUST00000119727 2147 ntBASIC6.95□□□□□ -1.3
Col8a1Q00780 Vmn1r51-204ENSMUST00000226977 4357 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
Col8a1Q00780 Gm38123-201ENSMUST00000194990 2779 ntBASIC6.95□□□□□ -1.3
Col8a1Q00780 Lrit2-201ENSMUST00000057176 2790 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Col8a1Q00780 Kidins220-210ENSMUST00000222941 6277 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
Col8a1Q00780 Uba1-202ENSMUST00000089217 4044 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Col8a1Q00780 Nrep-203ENSMUST00000171533 2156 ntAPPRIS P1 TSL 2 BASIC6.95□□□□□ -1.3
Col8a1Q00780 Olfr152-203ENSMUST00000215394 2172 ntAPPRIS ALT1 TSL 5 BASIC6.95□□□□□ -1.3
Col8a1Q00780 Thg1l-202ENSMUST00000109254 2202 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Col8a1Q00780 Zranb1-205ENSMUST00000215716 2205 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
Col8a1Q00780 Ces2g-201ENSMUST00000043183 2859 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Col8a1Q00780 Mroh2b-201ENSMUST00000045736 4829 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
Col8a1Q00780 Lrba-206ENSMUST00000195524 3322 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Col8a1Q00780 Mum1l1-203ENSMUST00000113043 4600 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
Col8a1Q00780 Gm5386-201ENSMUST00000121749 2450 ntBASIC6.94□□□□□ -1.3
Col8a1Q00780 Gm15577-201ENSMUST00000144350 2293 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Col8a1Q00780 Cyld-203ENSMUST00000109626 7945 ntAPPRIS P3 TSL 5 BASIC6.94□□□□□ -1.3
Col8a1Q00780 Rtl5-201ENSMUST00000113631 4653 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
Col8a1Q00780 Gm16434-201ENSMUST00000100888 2066 ntAPPRIS P5 TSL 1 (best) BASIC6.94□□□□□ -1.3
Col8a1Q00780 Gm6676-201ENSMUST00000166493 2066 ntAPPRIS P5 TSL 1 (best) BASIC6.94□□□□□ -1.3
Col8a1Q00780 Gm11282-201ENSMUST00000119018 1416 ntBASIC6.94□□□□□ -1.3
Col8a1Q00780 Slc5a7-201ENSMUST00000095712 5176 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Col8a1Q00780 Flii-201ENSMUST00000002889 4060 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Col8a1Q00780 Obox3-201ENSMUST00000086122 1890 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
Col8a1Q00780 9130214F15Rik-201ENSMUST00000208727 1653 ntBASIC6.94□□□□□ -1.3
Col8a1Q00780 Kng1-203ENSMUST00000089902 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
Col8a1Q00780 Slc38a1-202ENSMUST00000088454 7059 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Col8a1Q00780 Adgrl2-220ENSMUST00000200543 5509 ntAPPRIS ALT1 TSL 5 BASIC6.94□□□□□ -1.3
Col8a1Q00780 AC107757.2-201ENSMUST00000226370 1466 ntBASIC6.94□□□□□ -1.3
Col8a1Q00780 Cwc22-205ENSMUST00000111824 2603 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
Col8a1Q00780 CT009536.1-201ENSMUST00000223774 2151 ntBASIC6.94□□□□□ -1.3
Col8a1Q00780 Amelx-204ENSMUST00000112120 727 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Col8a1Q00780 Gm12584-201ENSMUST00000117109 1105 ntBASIC6.94□□□□□ -1.3
Col8a1Q00780 Gm13915-201ENSMUST00000119314 931 ntBASIC6.94□□□□□ -1.3
Col8a1Q00780 Mup-ps10-201ENSMUST00000119626 556 ntBASIC6.94□□□□□ -1.3
Col8a1Q00780 Gm11945-201ENSMUST00000120551 476 ntBASIC6.94□□□□□ -1.3
Col8a1Q00780 Gm11278-201ENSMUST00000121002 997 ntBASIC6.94□□□□□ -1.3
Col8a1Q00780 Gm12535-201ENSMUST00000121025 484 ntBASIC6.94□□□□□ -1.3
Col8a1Q00780 Gm11897-201ENSMUST00000121976 828 ntBASIC6.94□□□□□ -1.3
Col8a1Q00780 1810062O18Rik-204ENSMUST00000141265 751 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Col8a1Q00780 Gm20417-201ENSMUST00000174784 425 ntTSL 5 BASIC6.94□□□□□ -1.3
Col8a1Q00780 Vmn2r-ps118-201ENSMUST00000176785 908 ntBASIC6.94□□□□□ -1.3
Col8a1Q00780 Raet1e-202ENSMUST00000178026 1218 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Col8a1Q00780 Gm10591-201ENSMUST00000178168 402 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Col8a1Q00780 Ccl21b-202ENSMUST00000178864 402 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Col8a1Q00780 4930532G15Rik-201ENSMUST00000180632 699 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Col8a1Q00780 Gm28573-201ENSMUST00000187821 380 ntBASIC6.94□□□□□ -1.3
Col8a1Q00780 Lax1-202ENSMUST00000189524 628 ntTSL 2 BASIC6.94□□□□□ -1.3
Col8a1Q00780 Gm28145-201ENSMUST00000189742 380 ntBASIC6.94□□□□□ -1.3
Col8a1Q00780 Gm28648-201ENSMUST00000190092 343 ntBASIC6.94□□□□□ -1.3
Col8a1Q00780 Gm28400-201ENSMUST00000191332 380 ntBASIC6.94□□□□□ -1.3
Col8a1Q00780 Gm37700-201ENSMUST00000192617 965 ntBASIC6.94□□□□□ -1.3
Col8a1Q00780 Gm32554-201ENSMUST00000196310 970 ntTSL 5 BASIC6.94□□□□□ -1.3
Col8a1Q00780 1700108N06Rik-201ENSMUST00000196572 681 ntTSL 5 BASIC6.94□□□□□ -1.3
Col8a1Q00780 Gm43057-201ENSMUST00000196789 429 ntTSL 5 BASIC6.94□□□□□ -1.3
Col8a1Q00780 4930437M23Rik-201ENSMUST00000197456 968 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Col8a1Q00780 Ighv8-15-201ENSMUST00000197770 294 ntBASIC6.94□□□□□ -1.3
Col8a1Q00780 Gm43358-201ENSMUST00000199217 970 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Col8a1Q00780 Gm43131-201ENSMUST00000200042 969 ntTSL 5 BASIC6.94□□□□□ -1.3
Col8a1Q00780 Gm43093-201ENSMUST00000202439 1213 ntBASIC6.94□□□□□ -1.3
Col8a1Q00780 Gm43812-202ENSMUST00000202701 581 ntBASIC6.94□□□□□ -1.3
Col8a1Q00780 Gm44722-201ENSMUST00000206473 436 ntBASIC6.94□□□□□ -1.3
Col8a1Q00780 Gm45379-201ENSMUST00000211772 549 ntBASIC6.94□□□□□ -1.3
Col8a1Q00780 1700047G07Rik-202ENSMUST00000212351 842 ntTSL 5 BASIC6.94□□□□□ -1.3
Col8a1Q00780 AC123835.1-201ENSMUST00000214362 670 ntBASIC6.94□□□□□ -1.3
Col8a1Q00780 Gm18024-201ENSMUST00000218516 690 ntBASIC6.94□□□□□ -1.3
Col8a1Q00780 Gm3333-202ENSMUST00000221763 1044 ntBASIC6.94□□□□□ -1.3
Col8a1Q00780 Aoah-202ENSMUST00000221982 919 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Col8a1Q00780 Reg2-201ENSMUST00000023906 698 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Col8a1Q00780 Mgat4d-201ENSMUST00000038692 1293 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Col8a1Q00780 Gm24919-201ENSMUST00000083020 106 ntBASIC6.94□□□□□ -1.3
Col8a1Q00780 Raet1d-201ENSMUST00000095795 1271 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Col8a1Q00780 Olfr1137-201ENSMUST00000099850 933 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
Col8a1Q00780 Gm28370-201ENSMUST00000185303 3375 ntTSL 5 BASIC6.94□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 65 ms