Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Rasl11a-201ENSMUST00000031646 1126 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Hmgb3O54879 Tex46-201ENSMUST00000046647 683 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Hmgb3O54879 Slc36a3-202ENSMUST00000069816 893 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Hmgb3O54879 Rpl21-ps3-201ENSMUST00000080223 483 ntBASIC6.21□□□□□ -1.42
Hmgb3O54879 Olfr2-201ENSMUST00000094109 1250 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Hmgb3O54879 Gpr119-201ENSMUST00000053970 2269 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Hmgb3O54879 Vmn1r71-209ENSMUST00000228526 5137 ntAPPRIS P2 BASIC6.21□□□□□ -1.42
Hmgb3O54879 Gm37855-201ENSMUST00000192571 3700 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Hmgb3O54879 Fbxw7-203ENSMUST00000107678 4073 ntAPPRIS ALT1 TSL 5 BASIC6.21□□□□□ -1.42
Hmgb3O54879 Fmr1-203ENSMUST00000114654 4061 ntAPPRIS ALT1 TSL 5 BASIC6.21□□□□□ -1.42
Hmgb3O54879 Asap1-206ENSMUST00000175799 4237 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
Hmgb3O54879 Uty-204ENSMUST00000139365 4684 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
Hmgb3O54879 Milr1-201ENSMUST00000086353 1348 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
Hmgb3O54879 Sept14-203ENSMUST00000182386 1642 ntAPPRIS P2 TSL 5 BASIC6.21□□□□□ -1.42
Hmgb3O54879 Gm6999-201ENSMUST00000180427 2658 ntTSL 2 BASIC6.21□□□□□ -1.42
Hmgb3O54879 Vmn1r6-203ENSMUST00000227131 8330 ntAPPRIS P2 BASIC6.21□□□□□ -1.42
Hmgb3O54879 Gm45250-201ENSMUST00000209414 3592 ntBASIC6.21□□□□□ -1.42
Hmgb3O54879 Abraxas1-203ENSMUST00000117364 1657 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Hmgb3O54879 Pcdh15-232ENSMUST00000177420 4878 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Hmgb3O54879 Slc6a18-202ENSMUST00000109679 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
Hmgb3O54879 Gm10862-201ENSMUST00000193956 3350 ntBASIC6.2□□□□□ -1.42
Hmgb3O54879 Olfr1555-ps1-202ENSMUST00000219261 2918 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Hmgb3O54879 Ldah-202ENSMUST00000169104 2626 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Hmgb3O54879 Gm31343-201ENSMUST00000207967 2454 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Hmgb3O54879 Ttc29-201ENSMUST00000049395 2450 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Hmgb3O54879 AC154270.2-201ENSMUST00000226755 2306 ntBASIC6.2□□□□□ -1.42
Hmgb3O54879 Gm29671-201ENSMUST00000189438 2166 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Hmgb3O54879 Prrg1-201ENSMUST00000114024 3900 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
Hmgb3O54879 Ints9-201ENSMUST00000043914 2674 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Hmgb3O54879 Nxpe4-201ENSMUST00000093853 3173 ntAPPRIS P2 TSL 5 BASIC6.2□□□□□ -1.42
Hmgb3O54879 Actl11-201ENSMUST00000085073 3993 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Hmgb3O54879 Gm8914-201ENSMUST00000101396 1035 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Hmgb3O54879 Gm25803-201ENSMUST00000104419 131 ntBASIC6.2□□□□□ -1.42
Hmgb3O54879 Gm5071-201ENSMUST00000104922 1035 ntBASIC6.2□□□□□ -1.42
Hmgb3O54879 Gm14419-201ENSMUST00000108975 683 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Hmgb3O54879 Gm14435-201ENSMUST00000108995 643 ntAPPRIS P5 TSL 2 BASIC6.2□□□□□ -1.42
Hmgb3O54879 Gm12452-201ENSMUST00000117128 331 ntBASIC6.2□□□□□ -1.42
Hmgb3O54879 Gm13526-201ENSMUST00000117970 189 ntBASIC6.2□□□□□ -1.42
Hmgb3O54879 Gm12917-201ENSMUST00000119850 639 ntBASIC6.2□□□□□ -1.42
Hmgb3O54879 Gm25319-201ENSMUST00000122552 325 ntBASIC6.2□□□□□ -1.42
Hmgb3O54879 Gm25545-201ENSMUST00000122673 323 ntBASIC6.2□□□□□ -1.42
Hmgb3O54879 Gm15873-201ENSMUST00000123390 761 ntTSL 3 BASIC6.2□□□□□ -1.42
Hmgb3O54879 Gm12064-201ENSMUST00000133819 533 ntTSL 3 BASIC6.2□□□□□ -1.42
Hmgb3O54879 Gm13857-202ENSMUST00000141091 617 ntTSL 3 BASIC6.2□□□□□ -1.42
Hmgb3O54879 Gm371-201ENSMUST00000142240 1245 ntBASIC6.2□□□□□ -1.42
Hmgb3O54879 Gm22847-201ENSMUST00000157707 105 ntBASIC6.2□□□□□ -1.42
Hmgb3O54879 Stard6-202ENSMUST00000164223 976 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Hmgb3O54879 Gm4775-201ENSMUST00000169588 402 ntBASIC6.2□□□□□ -1.42
Hmgb3O54879 Anp32e-207ENSMUST00000170125 413 ntTSL 3 BASIC6.2□□□□□ -1.42
Hmgb3O54879 Gm17530-201ENSMUST00000194336 472 ntBASIC6.2□□□□□ -1.42
Hmgb3O54879 4930579P08Rik-201ENSMUST00000218193 1227 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Hmgb3O54879 AC241621.1-201ENSMUST00000224499 430 ntBASIC6.2□□□□□ -1.42
Hmgb3O54879 2410137M14Rik-201ENSMUST00000039846 865 ntAPPRIS P2 TSL 1 (best) BASIC6.2□□□□□ -1.42
Hmgb3O54879 Timm8b-201ENSMUST00000044051 518 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Hmgb3O54879 Olfr1494-201ENSMUST00000051768 948 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Hmgb3O54879 Olfr649-201ENSMUST00000060440 939 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Hmgb3O54879 Gm5072-201ENSMUST00000063726 1035 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Hmgb3O54879 Gm5619-201ENSMUST00000071172 760 ntBASIC6.2□□□□□ -1.42
Hmgb3O54879 Gm5513-201ENSMUST00000072982 1218 ntBASIC6.2□□□□□ -1.42
Hmgb3O54879 Tdgf1-ps2-201ENSMUST00000074412 505 ntBASIC6.2□□□□□ -1.42
Hmgb3O54879 Fat1-203ENSMUST00000189017 14651 ntTSL 5 BASIC6.2□□□□□ -1.42
Hmgb3O54879 Gm26861-201ENSMUST00000180807 5278 ntTSL 5 BASIC6.2□□□□□ -1.42
Hmgb3O54879 Maoa-201ENSMUST00000026013 4167 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Hmgb3O54879 Mtbp-204ENSMUST00000169667 2570 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Hmgb3O54879 Gm31805-201ENSMUST00000211921 4031 ntTSL 3 BASIC6.2□□□□□ -1.42
Hmgb3O54879 Wdr64-203ENSMUST00000194087 3225 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
Hmgb3O54879 Ace2-202ENSMUST00000112271 3578 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Hmgb3O54879 Eps15-204ENSMUST00000132165 2295 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
Hmgb3O54879 Kcnmb2-201ENSMUST00000119310 2600 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Hmgb3O54879 Gm37090-201ENSMUST00000195694 4105 ntBASIC6.2□□□□□ -1.42
Hmgb3O54879 AC158799.1-204ENSMUST00000217441 1321 ntTSL 5 BASIC6.2□□□□□ -1.42
Hmgb3O54879 AC125487.2-201ENSMUST00000219810 1300 ntBASIC6.2□□□□□ -1.42
Hmgb3O54879 Gm42568-201ENSMUST00000195639 1841 ntBASIC6.2□□□□□ -1.42
Hmgb3O54879 Magea10-201ENSMUST00000088481 1821 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Hmgb3O54879 Gm44752-201ENSMUST00000207140 3305 ntBASIC6.2□□□□□ -1.42
Hmgb3O54879 Ate1-208ENSMUST00000216011 1680 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
Hmgb3O54879 Gjc3-201ENSMUST00000077119 4002 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Hmgb3O54879 Cntn4-204ENSMUST00000113260 2531 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Hmgb3O54879 Mroh4-201ENSMUST00000023271 3583 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Hmgb3O54879 Gm1982-201ENSMUST00000188615 1887 ntBASIC6.19□□□□□ -1.42
Hmgb3O54879 Olfr1392-207ENSMUST00000217275 3098 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Hmgb3O54879 Gm38244-201ENSMUST00000191737 2586 ntBASIC6.19□□□□□ -1.42
Hmgb3O54879 A630001G21Rik-201ENSMUST00000064788 1353 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
Hmgb3O54879 2900079G21Rik-202ENSMUST00000144424 2944 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Hmgb3O54879 4921525O09Rik-201ENSMUST00000220691 3270 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Hmgb3O54879 9330182O14Rik-202ENSMUST00000228780 2053 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Hmgb3O54879 Olfr1247-202ENSMUST00000111532 6070 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Hmgb3O54879 Schip1-207ENSMUST00000182997 1557 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Hmgb3O54879 Gm45221-201ENSMUST00000207822 2272 ntBASIC6.19□□□□□ -1.42
Hmgb3O54879 Gm45512-201ENSMUST00000210432 1553 ntBASIC6.19□□□□□ -1.42
Hmgb3O54879 Strada-203ENSMUST00000106867 3386 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Hmgb3O54879 Rfpl4-202ENSMUST00000179971 1445 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Hmgb3O54879 Nup93-203ENSMUST00000211822 2674 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Hmgb3O54879 Ccr9-203ENSMUST00000166236 5197 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Hmgb3O54879 Samd8-202ENSMUST00000119430 6801 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Hmgb3O54879 Arhgap1-201ENSMUST00000090614 2866 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Hmgb3O54879 Olfr332-201ENSMUST00000180165 3426 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
Hmgb3O54879 Gm43409-201ENSMUST00000195921 2162 ntTSL 5 BASIC6.19□□□□□ -1.42
Hmgb3O54879 Pdzd9-201ENSMUST00000033178 2180 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Hmgb3O54879 Cd44-201ENSMUST00000005218 5614 ntAPPRIS P4 TSL 1 (best) BASIC6.19□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 89.2 ms