Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Gm22811-201ENSMUST00000157468 154 ntBASIC7.41□□□□□ -1.22
Clrn1Q8K445 Gm16571-201ENSMUST00000159112 291 ntBASIC7.41□□□□□ -1.22
Clrn1Q8K445 Gm15680-201ENSMUST00000161597 465 ntTSL 5 BASIC7.41□□□□□ -1.22
Clrn1Q8K445 1700129C05Rik-203ENSMUST00000162271 325 ntAPPRIS ALT2 TSL 3 BASIC7.41□□□□□ -1.22
Clrn1Q8K445 Gm5916-201ENSMUST00000168452 1142 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Clrn1Q8K445 Olfr772-201ENSMUST00000169800 1004 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
Clrn1Q8K445 Lgals1-ps2-201ENSMUST00000170221 519 ntBASIC7.41□□□□□ -1.22
Clrn1Q8K445 H2-T24-202ENSMUST00000174063 884 ntTSL 3 BASIC7.41□□□□□ -1.22
Clrn1Q8K445 Obox2-203ENSMUST00000174076 782 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
Clrn1Q8K445 Gm5973-201ENSMUST00000178542 496 ntBASIC7.41□□□□□ -1.22
Clrn1Q8K445 4930471M09Rik-201ENSMUST00000181849 1112 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Clrn1Q8K445 Gm35025-202ENSMUST00000193114 455 ntTSL 3 BASIC7.41□□□□□ -1.22
Clrn1Q8K445 Gm37799-201ENSMUST00000194018 547 ntTSL 3 BASIC7.41□□□□□ -1.22
Clrn1Q8K445 Gm43471-201ENSMUST00000197550 467 ntBASIC7.41□□□□□ -1.22
Clrn1Q8K445 Gm17937-201ENSMUST00000197908 742 ntBASIC7.41□□□□□ -1.22
Clrn1Q8K445 Gm42775-201ENSMUST00000198407 740 ntTSL 3 BASIC7.41□□□□□ -1.22
Clrn1Q8K445 Gm43840-201ENSMUST00000199444 484 ntBASIC7.41□□□□□ -1.22
Clrn1Q8K445 8030487O14Rik-201ENSMUST00000200244 903 ntBASIC7.41□□□□□ -1.22
Clrn1Q8K445 Gm19039-201ENSMUST00000204363 575 ntBASIC7.41□□□□□ -1.22
Clrn1Q8K445 Gm44743-201ENSMUST00000209062 386 ntBASIC7.41□□□□□ -1.22
Clrn1Q8K445 Gm45283-201ENSMUST00000210593 628 ntBASIC7.41□□□□□ -1.22
Clrn1Q8K445 Gm45334-201ENSMUST00000211118 1227 ntTSL 5 BASIC7.41□□□□□ -1.22
Clrn1Q8K445 Cenpn-205ENSMUST00000212775 837 ntTSL 3 BASIC7.41□□□□□ -1.22
Clrn1Q8K445 AC132474.3-201ENSMUST00000213244 383 ntTSL 5 BASIC7.41□□□□□ -1.22
Clrn1Q8K445 Gm17875-201ENSMUST00000216005 941 ntBASIC7.41□□□□□ -1.22
Clrn1Q8K445 Gm33037-201ENSMUST00000217927 642 ntTSL 3 BASIC7.41□□□□□ -1.22
Clrn1Q8K445 AC153864.1-201ENSMUST00000218482 523 ntBASIC7.41□□□□□ -1.22
Clrn1Q8K445 Gm7239-201ENSMUST00000220981 860 ntBASIC7.41□□□□□ -1.22
Clrn1Q8K445 AC154742.1-201ENSMUST00000223477 573 ntTSL 5 BASIC7.41□□□□□ -1.22
Clrn1Q8K445 AC124196.1-201ENSMUST00000225970 1032 ntBASIC7.41□□□□□ -1.22
Clrn1Q8K445 Olfr147-201ENSMUST00000056364 1166 ntAPPRIS P2 TSL 2 BASIC7.41□□□□□ -1.22
Clrn1Q8K445 Acsm5-201ENSMUST00000066465 2981 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Clrn1Q8K445 Anapc15-ps-201ENSMUST00000099328 426 ntAPPRIS ALT2 TSL 5 BASIC7.41□□□□□ -1.22
Clrn1Q8K445 Olfr982-201ENSMUST00000054051 5576 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
Clrn1Q8K445 Slc12a1-202ENSMUST00000110494 4740 ntAPPRIS ALT2 TSL 5 BASIC7.41□□□□□ -1.22
Clrn1Q8K445 Gm28898-201ENSMUST00000189604 2167 ntTSL 5 BASIC7.41□□□□□ -1.22
Clrn1Q8K445 Olfr632-203ENSMUST00000214711 3282 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
Clrn1Q8K445 Gm18359-201ENSMUST00000173024 1459 ntBASIC7.41□□□□□ -1.22
Clrn1Q8K445 Afap1l2-201ENSMUST00000111584 3597 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
Clrn1Q8K445 Gm44141-201ENSMUST00000204231 1583 ntBASIC7.41□□□□□ -1.22
Clrn1Q8K445 Eapp-206ENSMUST00000163433 2658 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Clrn1Q8K445 Olfr212-201ENSMUST00000075756 2672 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Clrn1Q8K445 Sept14-203ENSMUST00000182386 1642 ntAPPRIS P2 TSL 5 BASIC7.41□□□□□ -1.22
Clrn1Q8K445 AC061963.2-201ENSMUST00000213541 2739 ntBASIC7.41□□□□□ -1.22
Clrn1Q8K445 Gm43776-201ENSMUST00000199729 2914 ntBASIC7.41□□□□□ -1.22
Clrn1Q8K445 Gm26563-202ENSMUST00000181152 1931 ntTSL 5 BASIC7.4□□□□□ -1.22
Clrn1Q8K445 D030045P18Rik-203ENSMUST00000214947 1938 ntTSL 5 BASIC7.4□□□□□ -1.22
Clrn1Q8K445 AI429214-201ENSMUST00000098825 1930 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
Clrn1Q8K445 Gphn-202ENSMUST00000110388 3300 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Clrn1Q8K445 Asb14-201ENSMUST00000090337 2062 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.22
Clrn1Q8K445 Atp7a-202ENSMUST00000113557 4900 ntAPPRIS P3 TSL 1 (best) BASIC7.4□□□□□ -1.22
Clrn1Q8K445 2310001H17Rik-202ENSMUST00000181238 2237 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Clrn1Q8K445 AC122426.1-201ENSMUST00000214736 2235 ntBASIC7.4□□□□□ -1.22
Clrn1Q8K445 Prepl-202ENSMUST00000171795 3830 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Clrn1Q8K445 Gm42700-201ENSMUST00000199071 2437 ntBASIC7.4□□□□□ -1.22
Clrn1Q8K445 Cnksr3-202ENSMUST00000150282 2554 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Clrn1Q8K445 Gas2l3-202ENSMUST00000105298 6305 ntAPPRIS P2 TSL 1 (best) BASIC7.4□□□□□ -1.22
Clrn1Q8K445 Gm34184-201ENSMUST00000216477 2713 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Clrn1Q8K445 Adgrg6-201ENSMUST00000041168 6507 ntAPPRIS P2 TSL 1 (best) BASIC7.4□□□□□ -1.22
Clrn1Q8K445 Gm33027-201ENSMUST00000206093 4664 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Clrn1Q8K445 Plp1-201ENSMUST00000033800 4699 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Clrn1Q8K445 Gm37978-201ENSMUST00000194736 2915 ntBASIC7.4□□□□□ -1.22
Clrn1Q8K445 Mep1a-202ENSMUST00000117137 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.22
Clrn1Q8K445 Gm5113-201ENSMUST00000085668 2955 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Clrn1Q8K445 Olfr1394-202ENSMUST00000216273 3024 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.22
Clrn1Q8K445 Mx1-201ENSMUST00000023655 3385 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.22
Clrn1Q8K445 Cep72-201ENSMUST00000036456 3641 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Clrn1Q8K445 Mup1-202ENSMUST00000103012 927 ntAPPRIS P3 TSL 1 (best) BASIC7.4□□□□□ -1.22
Clrn1Q8K445 Ighv1-82-201ENSMUST00000103549 294 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
Clrn1Q8K445 Gm22934-201ENSMUST00000103961 132 ntBASIC7.4□□□□□ -1.22
Clrn1Q8K445 Mup16-202ENSMUST00000107483 927 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Clrn1Q8K445 Mup17-201ENSMUST00000107484 927 ntAPPRIS P1 TSL 2 BASIC7.4□□□□□ -1.22
Clrn1Q8K445 Casp8ap2-202ENSMUST00000108178 1189 ntAPPRIS ALT2 TSL 5 BASIC7.4□□□□□ -1.22
Clrn1Q8K445 Gm1330-202ENSMUST00000109942 555 ntAPPRIS ALT2 TSL 5 BASIC7.4□□□□□ -1.22
Clrn1Q8K445 Gm14692-201ENSMUST00000114672 782 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.22
Clrn1Q8K445 Gm1140-201ENSMUST00000114675 782 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.22
Clrn1Q8K445 Amd-ps4-201ENSMUST00000118392 1003 ntBASIC7.4□□□□□ -1.22
Clrn1Q8K445 Gm13649-201ENSMUST00000122325 606 ntBASIC7.4□□□□□ -1.22
Clrn1Q8K445 Gm11588-201ENSMUST00000141758 658 ntTSL 5 BASIC7.4□□□□□ -1.22
Clrn1Q8K445 Gm371-201ENSMUST00000142240 1245 ntBASIC7.4□□□□□ -1.22
Clrn1Q8K445 Prl2c5-204ENSMUST00000151144 623 ntTSL 2 BASIC7.4□□□□□ -1.22
Clrn1Q8K445 Bud31-207ENSMUST00000162594 867 ntAPPRIS P1 TSL 2 BASIC7.4□□□□□ -1.22
Clrn1Q8K445 Ighv1-62-2-201ENSMUST00000163467 302 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
Clrn1Q8K445 Gm5795-202ENSMUST00000166275 612 ntTSL 5 BASIC7.4□□□□□ -1.22
Clrn1Q8K445 Ighv1-71-201ENSMUST00000166645 302 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
Clrn1Q8K445 Gm8279-203ENSMUST00000170040 612 ntTSL 5 BASIC7.4□□□□□ -1.22
Clrn1Q8K445 Svs3a-201ENSMUST00000017147 1191 ntAPPRIS P3 TSL 1 (best) BASIC7.4□□□□□ -1.22
Clrn1Q8K445 Gm9399-201ENSMUST00000175771 639 ntBASIC7.4□□□□□ -1.22
Clrn1Q8K445 Gm10413-202ENSMUST00000177913 612 ntAPPRIS ALT2 TSL 2 BASIC7.4□□□□□ -1.22
Clrn1Q8K445 Gm3047-202ENSMUST00000177998 618 ntAPPRIS ALT2 TSL 5 BASIC7.4□□□□□ -1.22
Clrn1Q8K445 Gm8297-203ENSMUST00000178389 618 ntAPPRIS ALT2 TSL 5 BASIC7.4□□□□□ -1.22
Clrn1Q8K445 Gm3424-202ENSMUST00000178418 618 ntAPPRIS ALT2 TSL 5 BASIC7.4□□□□□ -1.22
Clrn1Q8K445 Gm3187-201ENSMUST00000178429 618 ntAPPRIS ALT2 TSL 5 BASIC7.4□□□□□ -1.22
Clrn1Q8K445 Gm10338-202ENSMUST00000178623 612 ntTSL 5 BASIC7.4□□□□□ -1.22
Clrn1Q8K445 Gm8159-203ENSMUST00000179231 618 ntAPPRIS ALT2 TSL 5 BASIC7.4□□□□□ -1.22
Clrn1Q8K445 Gm8246-201ENSMUST00000179411 618 ntAPPRIS ALT2 TSL 5 BASIC7.4□□□□□ -1.22
Clrn1Q8K445 Gm3012-202ENSMUST00000179486 612 ntAPPRIS ALT2 TSL 2 BASIC7.4□□□□□ -1.22
Clrn1Q8K445 Tdgf1-ps1-201ENSMUST00000179882 516 ntBASIC7.4□□□□□ -1.22
Clrn1Q8K445 Gm27427-201ENSMUST00000185134 193 ntBASIC7.4□□□□□ -1.22
Clrn1Q8K445 Gm28100-201ENSMUST00000186560 582 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Retrieved 100 of 76,532 protein–RNA pairs in 65.1 ms