Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 AC107757.2-201ENSMUST00000226370 1466 ntBASIC9.08□□□□□ -0.96
Nup88Q8CEC0 Dmd-202ENSMUST00000113992 1858 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Nup88Q8CEC0 Nyap2-201ENSMUST00000068275 4919 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Nup88Q8CEC0 Ndufb8-209ENSMUST00000171415 2142 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Nup88Q8CEC0 Vmn1r86-202ENSMUST00000226604 6378 ntAPPRIS P2 BASIC9.08□□□□□ -0.96
Nup88Q8CEC0 Hipk2-205ENSMUST00000160962 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Nup88Q8CEC0 D3Ertd751e-207ENSMUST00000146165 3574 ntAPPRIS P3 TSL 1 (best) BASIC9.08□□□□□ -0.96
Nup88Q8CEC0 Zscan18-203ENSMUST00000210650 3668 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
Nup88Q8CEC0 Cd38-201ENSMUST00000030964 3270 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Nup88Q8CEC0 Ugt3a1-201ENSMUST00000022861 2244 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Nup88Q8CEC0 Gm36694-201ENSMUST00000205855 2719 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Nup88Q8CEC0 Gm45805-201ENSMUST00000212695 2066 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Nup88Q8CEC0 Trp53cor1-201ENSMUST00000133221 2956 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Nup88Q8CEC0 Zfp467-207ENSMUST00000114563 463 ntTSL 5 BASIC9.08□□□□□ -0.96
Nup88Q8CEC0 Gm15586-201ENSMUST00000121218 528 ntBASIC9.08□□□□□ -0.96
Nup88Q8CEC0 Gm15843-201ENSMUST00000146593 529 ntBASIC9.08□□□□□ -0.96
Nup88Q8CEC0 Gm23533-201ENSMUST00000157540 245 ntBASIC9.08□□□□□ -0.96
Nup88Q8CEC0 Gm22670-201ENSMUST00000158724 143 ntBASIC9.08□□□□□ -0.96
Nup88Q8CEC0 Gm1647-201ENSMUST00000195406 735 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Nup88Q8CEC0 Gm42161-201ENSMUST00000196278 726 ntTSL 5 BASIC9.08□□□□□ -0.96
Nup88Q8CEC0 Gm43815-201ENSMUST00000197676 990 ntBASIC9.08□□□□□ -0.96
Nup88Q8CEC0 Lnp1-201ENSMUST00000210579 671 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
Nup88Q8CEC0 Gm45900-201ENSMUST00000211879 409 ntBASIC9.08□□□□□ -0.96
Nup88Q8CEC0 Mplkip-202ENSMUST00000221480 582 ntTSL 5 BASIC9.08□□□□□ -0.96
Nup88Q8CEC0 AC125543.2-201ENSMUST00000222114 105 ntBASIC9.08□□□□□ -0.96
Nup88Q8CEC0 CT030170.7-201ENSMUST00000223372 103 ntBASIC9.08□□□□□ -0.96
Nup88Q8CEC0 Gkn2-201ENSMUST00000032128 788 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Nup88Q8CEC0 Olfr51-201ENSMUST00000076514 924 ntAPPRIS P1 BASIC9.08□□□□□ -0.96
Nup88Q8CEC0 Gm26264-201ENSMUST00000083278 159 ntBASIC9.08□□□□□ -0.96
Nup88Q8CEC0 Gm12532-201ENSMUST00000148448 2684 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Nup88Q8CEC0 Casr-202ENSMUST00000114847 4303 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Nup88Q8CEC0 Olfr766-ps1-201ENSMUST00000204515 2909 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
Nup88Q8CEC0 Gm36814-201ENSMUST00000197457 1755 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Nup88Q8CEC0 C030034L19Rik-201ENSMUST00000180874 2032 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Nup88Q8CEC0 Pbrm1-205ENSMUST00000112092 5009 ntTSL 5 BASIC9.08□□□□□ -0.96
Nup88Q8CEC0 Olfr702-204ENSMUST00000219803 1646 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
Nup88Q8CEC0 Galnt5-201ENSMUST00000112616 4225 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Nup88Q8CEC0 D330045A20Rik-201ENSMUST00000046763 3737 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Nup88Q8CEC0 Olfr433-202ENSMUST00000214690 2968 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
Nup88Q8CEC0 Ankef1-210ENSMUST00000180246 2726 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
Nup88Q8CEC0 Rbms2-202ENSMUST00000099139 3302 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Nup88Q8CEC0 Adgrl3-211ENSMUST00000120128 6370 ntTSL 5 BASIC9.08□□□□□ -0.96
Nup88Q8CEC0 Olfr1432-202ENSMUST00000207710 2068 ntAPPRIS P5 TSL 5 BASIC9.08□□□□□ -0.96
Nup88Q8CEC0 Schip1-207ENSMUST00000182997 1557 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Nup88Q8CEC0 Gm28157-201ENSMUST00000187675 2165 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Nup88Q8CEC0 Gm29146-201ENSMUST00000188904 2165 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Nup88Q8CEC0 Gm28772-201ENSMUST00000189554 2165 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Nup88Q8CEC0 Gm37547-201ENSMUST00000193277 2165 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Nup88Q8CEC0 Oat-201ENSMUST00000084500 2152 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Nup88Q8CEC0 4930456G14Rik-201ENSMUST00000193054 1330 ntBASIC9.07□□□□□ -0.96
Nup88Q8CEC0 Emsy-201ENSMUST00000038359 3564 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Nup88Q8CEC0 Gm21977-201ENSMUST00000163725 1402 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
Nup88Q8CEC0 Gm8068-201ENSMUST00000167440 1402 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
Nup88Q8CEC0 Psg19-201ENSMUST00000004657 2105 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Nup88Q8CEC0 Psma2-201ENSMUST00000170836 2911 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Nup88Q8CEC0 Gabrb3-202ENSMUST00000085240 5712 ntTSL 5 BASIC9.07□□□□□ -0.96
Nup88Q8CEC0 Lair1-204ENSMUST00000108600 742 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Nup88Q8CEC0 Gm15576-201ENSMUST00000117806 583 ntBASIC9.07□□□□□ -0.96
Nup88Q8CEC0 Rps25-ps1-201ENSMUST00000119876 378 ntBASIC9.07□□□□□ -0.96
Nup88Q8CEC0 1700125H03Rik-202ENSMUST00000139265 637 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Nup88Q8CEC0 1700060C16Rik-201ENSMUST00000150559 645 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Nup88Q8CEC0 Gm25372-201ENSMUST00000158161 255 ntBASIC9.07□□□□□ -0.96
Nup88Q8CEC0 Nedd8-202ENSMUST00000163750 514 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Nup88Q8CEC0 Gm17233-201ENSMUST00000168470 698 ntTSL 3 BASIC9.07□□□□□ -0.96
Nup88Q8CEC0 Mlip-212ENSMUST00000184848 1019 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Nup88Q8CEC0 Gm553-201ENSMUST00000189527 701 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Nup88Q8CEC0 Gm17530-201ENSMUST00000194336 472 ntBASIC9.07□□□□□ -0.96
Nup88Q8CEC0 Gm42932-201ENSMUST00000197280 744 ntBASIC9.07□□□□□ -0.96
Nup88Q8CEC0 Gm43108-201ENSMUST00000200525 293 ntBASIC9.07□□□□□ -0.96
Nup88Q8CEC0 Gm44380-201ENSMUST00000203125 293 ntBASIC9.07□□□□□ -0.96
Nup88Q8CEC0 Mypopos-204ENSMUST00000206381 473 ntTSL 2 BASIC9.07□□□□□ -0.96
Nup88Q8CEC0 Gm20274-201ENSMUST00000206967 584 ntBASIC9.07□□□□□ -0.96
Nup88Q8CEC0 Gm4977-201ENSMUST00000215709 1262 ntBASIC9.07□□□□□ -0.96
Nup88Q8CEC0 AC157571.1-201ENSMUST00000222014 520 ntBASIC9.07□□□□□ -0.96
Nup88Q8CEC0 CT009556.3-201ENSMUST00000226173 513 ntBASIC9.07□□□□□ -0.96
Nup88Q8CEC0 FAM237A-201ENSMUST00000226288 1105 ntAPPRIS P1 BASIC9.07□□□□□ -0.96
Nup88Q8CEC0 Gm42490-201ENSMUST00000198595 2064 ntBASIC9.07□□□□□ -0.96
Nup88Q8CEC0 Tmem144-201ENSMUST00000029568 2898 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Nup88Q8CEC0 Lars-201ENSMUST00000097590 3856 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Nup88Q8CEC0 Ogfod1-201ENSMUST00000060632 5214 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Nup88Q8CEC0 Cyhr1-202ENSMUST00000081291 3959 ntAPPRIS P3 TSL 1 (best) BASIC9.07□□□□□ -0.96
Nup88Q8CEC0 9630028H03Rik-201ENSMUST00000129868 2364 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Nup88Q8CEC0 4933424H11Rik-201ENSMUST00000200511 2018 ntBASIC9.07□□□□□ -0.96
Nup88Q8CEC0 Rab8b-201ENSMUST00000041139 4733 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Nup88Q8CEC0 Prdm14-201ENSMUST00000047577 2564 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Nup88Q8CEC0 Osbpl3-202ENSMUST00000090019 4039 ntAPPRIS ALT1 TSL 5 BASIC9.07□□□□□ -0.96
Nup88Q8CEC0 Ankrd49-206ENSMUST00000216372 2679 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Nup88Q8CEC0 2310058D17Rik-201ENSMUST00000131221 3201 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Nup88Q8CEC0 4930563E22Rik-201ENSMUST00000066087 3313 ntBASIC9.06□□□□□ -0.96
Nup88Q8CEC0 Bbs12-202ENSMUST00000108121 2348 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Nup88Q8CEC0 AC126806.1-201ENSMUST00000217349 3869 ntTSL 5 BASIC9.06□□□□□ -0.96
Nup88Q8CEC0 Cyfip1-203ENSMUST00000163845 4178 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Nup88Q8CEC0 4933406L23Rik-201ENSMUST00000203567 1509 ntBASIC9.06□□□□□ -0.96
Nup88Q8CEC0 AC164433.1-201ENSMUST00000226138 1544 ntBASIC9.06□□□□□ -0.96
Nup88Q8CEC0 Gprin3-201ENSMUST00000051065 8339 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Nup88Q8CEC0 Dis3l-202ENSMUST00000113890 3224 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Nup88Q8CEC0 Bdnf-209ENSMUST00000111050 3965 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Nup88Q8CEC0 Kcnb2-202ENSMUST00000175681 3963 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
Nup88Q8CEC0 Odf2-202ENSMUST00000046571 3959 ntAPPRIS ALT2 TSL 2 BASIC9.06□□□□□ -0.96
Nup88Q8CEC0 Akt3-203ENSMUST00000111160 4735 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 70.5 ms