Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Gm24824-201ENSMUST00000175097 78 ntBASIC8.15□□□□□ -1.1
Trim43aQ3TL54 Gm23187-201ENSMUST00000175746 86 ntBASIC8.15□□□□□ -1.1
Trim43aQ3TL54 Gm25442-201ENSMUST00000177270 92 ntBASIC8.15□□□□□ -1.1
Trim43aQ3TL54 Gm26980-201ENSMUST00000183321 395 ntBASIC8.15□□□□□ -1.1
Trim43aQ3TL54 Gm36667-201ENSMUST00000196125 753 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Trim43aQ3TL54 Gm40646-202ENSMUST00000218796 793 ntTSL 5 BASIC8.15□□□□□ -1.1
Trim43aQ3TL54 Gm6578-201ENSMUST00000080891 984 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Trim43aQ3TL54 Fastkd1-202ENSMUST00000102706 2511 ntAPPRIS ALT2 TSL 5 BASIC8.15□□□□□ -1.1
Trim43aQ3TL54 Klb-201ENSMUST00000031096 3540 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Trim43aQ3TL54 Dusp18-201ENSMUST00000055931 4632 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Trim43aQ3TL54 Olfr1564-204ENSMUST00000213751 5418 ntAPPRIS ALT1 TSL 5 BASIC8.15□□□□□ -1.11
Trim43aQ3TL54 Tcf7l2-210ENSMUST00000111657 4126 ntAPPRIS ALT2 TSL 5 BASIC8.15□□□□□ -1.11
Trim43aQ3TL54 Myo6-205ENSMUST00000127779 4067 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.11
Trim43aQ3TL54 Mroh2b-201ENSMUST00000045736 4829 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.11
Trim43aQ3TL54 Ankef1-202ENSMUST00000121717 2875 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
Trim43aQ3TL54 Gabrb3-202ENSMUST00000085240 5712 ntTSL 5 BASIC8.15□□□□□ -1.11
Trim43aQ3TL54 Rere-201ENSMUST00000105680 6503 ntAPPRIS ALT2 TSL 5 BASIC8.15□□□□□ -1.11
Trim43aQ3TL54 2310069B03Rik-202ENSMUST00000186147 1833 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
Trim43aQ3TL54 Rapgef5-205ENSMUST00000222105 2677 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
Trim43aQ3TL54 Kcnmb2-201ENSMUST00000119310 2600 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
Trim43aQ3TL54 Birc2-204ENSMUST00000190341 3331 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
Trim43aQ3TL54 Gm16233-201ENSMUST00000136170 1623 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Trim43aQ3TL54 Zcwpw2-201ENSMUST00000111769 1505 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Trim43aQ3TL54 Gm340-201ENSMUST00000172371 3729 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
Trim43aQ3TL54 Garnl3-201ENSMUST00000049618 3678 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
Trim43aQ3TL54 Clcn7-204ENSMUST00000160961 3983 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Trim43aQ3TL54 Gm44850-201ENSMUST00000205621 1329 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Trim43aQ3TL54 Nt5c1b-205ENSMUST00000217944 1975 ntAPPRIS ALT2 TSL 5 BASIC8.14□□□□□ -1.11
Trim43aQ3TL54 Ndrg3-201ENSMUST00000069600 2612 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Trim43aQ3TL54 Sorbs2-207ENSMUST00000130011 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
Trim43aQ3TL54 Gm25761-201ENSMUST00000103983 128 ntBASIC8.14□□□□□ -1.11
Trim43aQ3TL54 Dtwd1-201ENSMUST00000110437 1276 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Trim43aQ3TL54 Gm12072-201ENSMUST00000118293 715 ntBASIC8.14□□□□□ -1.11
Trim43aQ3TL54 Gm8802-201ENSMUST00000118633 740 ntBASIC8.14□□□□□ -1.11
Trim43aQ3TL54 Gm14824-201ENSMUST00000119421 737 ntBASIC8.14□□□□□ -1.11
Trim43aQ3TL54 Vmn1r-ps103-201ENSMUST00000120171 893 ntBASIC8.14□□□□□ -1.11
Trim43aQ3TL54 Gm2214-201ENSMUST00000121333 330 ntBASIC8.14□□□□□ -1.11
Trim43aQ3TL54 Gm12648-201ENSMUST00000126270 656 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Trim43aQ3TL54 Gm22811-201ENSMUST00000157468 154 ntBASIC8.14□□□□□ -1.11
Trim43aQ3TL54 S100a10-203ENSMUST00000170612 477 ntAPPRIS P1 TSL 3 BASIC8.14□□□□□ -1.11
Trim43aQ3TL54 Gm5205-201ENSMUST00000182253 1003 ntBASIC8.14□□□□□ -1.11
Trim43aQ3TL54 Gm6931-201ENSMUST00000183103 371 ntBASIC8.14□□□□□ -1.11
Trim43aQ3TL54 Ly6e-208ENSMUST00000188042 714 ntAPPRIS P1 TSL 3 BASIC8.14□□□□□ -1.11
Trim43aQ3TL54 Gm37799-201ENSMUST00000194018 547 ntTSL 3 BASIC8.14□□□□□ -1.11
Trim43aQ3TL54 Gm19035-202ENSMUST00000194575 959 ntBASIC8.14□□□□□ -1.11
Trim43aQ3TL54 Gm42884-201ENSMUST00000200729 422 ntTSL 2 BASIC8.14□□□□□ -1.11
Trim43aQ3TL54 Gm44245-201ENSMUST00000204304 232 ntBASIC8.14□□□□□ -1.11
Trim43aQ3TL54 Gm20670-201ENSMUST00000206468 338 ntTSL 3 BASIC8.14□□□□□ -1.11
Trim43aQ3TL54 1500002F19Rik-203ENSMUST00000211184 375 ntTSL 3 BASIC8.14□□□□□ -1.11
Trim43aQ3TL54 Gm4800-201ENSMUST00000215776 1266 ntBASIC8.14□□□□□ -1.11
Trim43aQ3TL54 Gm34662-202ENSMUST00000220753 603 ntTSL 5 BASIC8.14□□□□□ -1.11
Trim43aQ3TL54 AC207128.2-202ENSMUST00000224010 808 ntBASIC8.14□□□□□ -1.11
Trim43aQ3TL54 Cox8c-201ENSMUST00000053611 458 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Trim43aQ3TL54 Olfr448-201ENSMUST00000058668 933 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
Trim43aQ3TL54 6030452D12Rik-201ENSMUST00000066875 669 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Trim43aQ3TL54 Rps7-201ENSMUST00000074267 954 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Trim43aQ3TL54 Gm6083-201ENSMUST00000075518 357 ntBASIC8.14□□□□□ -1.11
Trim43aQ3TL54 Olfr417-201ENSMUST00000085862 930 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
Trim43aQ3TL54 Gm10419-204ENSMUST00000198585 4059 ntTSL 2 BASIC8.14□□□□□ -1.11
Trim43aQ3TL54 Zfp663-202ENSMUST00000103085 3451 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Trim43aQ3TL54 Entpd3-201ENSMUST00000047687 3453 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Trim43aQ3TL54 Srcap-214ENSMUST00000190390 9633 ntAPPRIS ALT2 TSL 5 BASIC8.14□□□□□ -1.11
Trim43aQ3TL54 Gm43161-201ENSMUST00000197020 1688 ntBASIC8.14□□□□□ -1.11
Trim43aQ3TL54 Gm42636-201ENSMUST00000197174 2239 ntBASIC8.14□□□□□ -1.11
Trim43aQ3TL54 Glb1l2-201ENSMUST00000040398 3701 ntAPPRIS P3 TSL 1 (best) BASIC8.14□□□□□ -1.11
Trim43aQ3TL54 Gm28583-201ENSMUST00000188903 2141 ntBASIC8.14□□□□□ -1.11
Trim43aQ3TL54 Slc25a53-203ENSMUST00000113070 3140 ntTSL 5 BASIC8.14□□□□□ -1.11
Trim43aQ3TL54 Ago3-201ENSMUST00000069097 15595 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Trim43aQ3TL54 Ccdc191-206ENSMUST00000178400 3643 ntAPPRIS P2 TSL 5 BASIC8.14□□□□□ -1.11
Trim43aQ3TL54 Arhgef3-202ENSMUST00000224981 3618 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
Trim43aQ3TL54 AC153955.2-201ENSMUST00000216739 4129 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Trim43aQ3TL54 Cmtr2-201ENSMUST00000056972 3545 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Trim43aQ3TL54 Fmo9-202ENSMUST00000148677 2462 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Trim43aQ3TL54 Gm39566-201ENSMUST00000210714 3908 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
Trim43aQ3TL54 Tll2-201ENSMUST00000025986 3369 ntAPPRIS P2 TSL 1 (best) BASIC8.13□□□□□ -1.11
Trim43aQ3TL54 Etv1-210ENSMUST00000161980 1939 ntTSL 5 BASIC8.13□□□□□ -1.11
Trim43aQ3TL54 Cast-207ENSMUST00000222588 4765 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
Trim43aQ3TL54 Apbb1ip-201ENSMUST00000014290 2773 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Trim43aQ3TL54 Cyp2c53-ps-202ENSMUST00000175960 1370 ntBASIC8.13□□□□□ -1.11
Trim43aQ3TL54 March1-201ENSMUST00000039540 2733 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Trim43aQ3TL54 St8sia4-201ENSMUST00000043336 5390 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Trim43aQ3TL54 Camk2d-205ENSMUST00000106401 3059 ntTSL 5 BASIC8.13□□□□□ -1.11
Trim43aQ3TL54 Gm38014-201ENSMUST00000193349 2612 ntBASIC8.13□□□□□ -1.11
Trim43aQ3TL54 Cep112-204ENSMUST00000106724 678 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Trim43aQ3TL54 Gm14450-201ENSMUST00000119984 240 ntBASIC8.13□□□□□ -1.11
Trim43aQ3TL54 Gm11203-201ENSMUST00000122169 741 ntBASIC8.13□□□□□ -1.11
Trim43aQ3TL54 4930439A04Rik-201ENSMUST00000137241 739 ntTSL 3 BASIC8.13□□□□□ -1.11
Trim43aQ3TL54 Gm14339-201ENSMUST00000146224 423 ntTSL 2 BASIC8.13□□□□□ -1.11
Trim43aQ3TL54 Gm26357-201ENSMUST00000158218 115 ntBASIC8.13□□□□□ -1.11
Trim43aQ3TL54 Olfr457-201ENSMUST00000170504 1039 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
Trim43aQ3TL54 Gm5698-201ENSMUST00000178317 724 ntBASIC8.13□□□□□ -1.11
Trim43aQ3TL54 9330179D12Rik-202ENSMUST00000180811 1001 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Trim43aQ3TL54 Gm6556-201ENSMUST00000181118 362 ntTSL 5 BASIC8.13□□□□□ -1.11
Trim43aQ3TL54 Gm20257-201ENSMUST00000185352 936 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Trim43aQ3TL54 Olfr802-202ENSMUST00000203785 5535 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
Trim43aQ3TL54 Tmem147-206ENSMUST00000208169 537 ntTSL 5 BASIC8.13□□□□□ -1.11
Trim43aQ3TL54 AC124585.1-201ENSMUST00000213334 953 ntTSL 5 BASIC8.13□□□□□ -1.11
Trim43aQ3TL54 4930555G21Rik-201ENSMUST00000221718 537 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Trim43aQ3TL54 AC139323.1-201ENSMUST00000223370 1040 ntBASIC8.13□□□□□ -1.11
Trim43aQ3TL54 AC207128.1-201ENSMUST00000225928 799 ntBASIC8.13□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 57.7 ms