Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Rubie-201ENSMUST00000151828 1137 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Col8a1Q00780 Gpx2-ps1-201ENSMUST00000160622 571 ntBASIC6.96□□□□□ -1.3
Col8a1Q00780 Vmn2r-ps41-201ENSMUST00000173587 980 ntBASIC6.96□□□□□ -1.3
Col8a1Q00780 Mir5625-201ENSMUST00000176598 80 ntBASIC6.96□□□□□ -1.3
Col8a1Q00780 Gm6176-201ENSMUST00000178209 906 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
Col8a1Q00780 Gm4567-201ENSMUST00000178591 906 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
Col8a1Q00780 Gm10668-201ENSMUST00000179491 906 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
Col8a1Q00780 Gm12117-201ENSMUST00000183831 456 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
Col8a1Q00780 Gm18254-201ENSMUST00000185699 1204 ntBASIC6.96□□□□□ -1.3
Col8a1Q00780 6030442E23Rik-201ENSMUST00000186618 642 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Col8a1Q00780 Gm4545-201ENSMUST00000190797 603 ntBASIC6.96□□□□□ -1.3
Col8a1Q00780 Gm37198-201ENSMUST00000195593 2110 ntBASIC6.96□□□□□ -1.3
Col8a1Q00780 Gm37134-201ENSMUST00000195810 628 ntTSL 3 BASIC6.96□□□□□ -1.3
Col8a1Q00780 Gm17937-201ENSMUST00000197908 742 ntBASIC6.96□□□□□ -1.3
Col8a1Q00780 Gm9023-201ENSMUST00000198408 1038 ntBASIC6.96□□□□□ -1.3
Col8a1Q00780 Gm35392-201ENSMUST00000209934 2121 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Col8a1Q00780 Gm20586-201ENSMUST00000210122 547 ntBASIC6.96□□□□□ -1.3
Col8a1Q00780 Gm18255-201ENSMUST00000211316 765 ntBASIC6.96□□□□□ -1.3
Col8a1Q00780 AC161426.1-201ENSMUST00000214137 286 ntBASIC6.96□□□□□ -1.3
Col8a1Q00780 4930401A07Rik-201ENSMUST00000214657 746 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Col8a1Q00780 AC167202.1-201ENSMUST00000219027 331 ntBASIC6.96□□□□□ -1.3
Col8a1Q00780 Gm7239-201ENSMUST00000220981 860 ntBASIC6.96□□□□□ -1.3
Col8a1Q00780 Gm7712-201ENSMUST00000222214 337 ntTSL 5 BASIC6.96□□□□□ -1.3
Col8a1Q00780 4933412O06Rik-201ENSMUST00000222681 1123 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Col8a1Q00780 AC147245.1-201ENSMUST00000223294 677 ntBASIC6.96□□□□□ -1.3
Col8a1Q00780 CT009733.1-203ENSMUST00000224033 451 ntBASIC6.96□□□□□ -1.3
Col8a1Q00780 AC126939.4-201ENSMUST00000225360 743 ntBASIC6.96□□□□□ -1.3
Col8a1Q00780 AC154843.1-201ENSMUST00000226897 1138 ntBASIC6.96□□□□□ -1.3
Col8a1Q00780 Olfr273-201ENSMUST00000051520 1059 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
Col8a1Q00780 Commd3-201ENSMUST00000061158 935 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Col8a1Q00780 Gm5560-201ENSMUST00000086918 892 ntBASIC6.96□□□□□ -1.3
Col8a1Q00780 Olfr665-201ENSMUST00000098165 951 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
Col8a1Q00780 Olfr1012-201ENSMUST00000099916 936 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
Col8a1Q00780 4930509G22Rik-201ENSMUST00000181206 2481 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Col8a1Q00780 Gm5743-202ENSMUST00000212004 1647 ntBASIC6.96□□□□□ -1.3
Col8a1Q00780 Elovl4-201ENSMUST00000034796 3001 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Col8a1Q00780 A430033K04Rik-202ENSMUST00000069862 3038 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Col8a1Q00780 Cd36-201ENSMUST00000082367 3016 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Col8a1Q00780 Rpap3-ps2-201ENSMUST00000184741 2161 ntBASIC6.96□□□□□ -1.3
Col8a1Q00780 Atl3-201ENSMUST00000025668 6376 ntAPPRIS P3 TSL 1 (best) BASIC6.96□□□□□ -1.3
Col8a1Q00780 Gm10364-201ENSMUST00000076633 1328 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Col8a1Q00780 Rgs8-203ENSMUST00000111812 3625 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.3
Col8a1Q00780 Gm32486-201ENSMUST00000209810 3816 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Col8a1Q00780 Slc2a9-205ENSMUST00000129099 3462 ntAPPRIS ALT2 TSL 5 BASIC6.96□□□□□ -1.3
Col8a1Q00780 AC153955.4-201ENSMUST00000217069 2752 ntBASIC6.96□□□□□ -1.3
Col8a1Q00780 Arfgef3-202ENSMUST00000215836 14579 ntAPPRIS P2 TSL 1 (best) BASIC6.96□□□□□ -1.3
Col8a1Q00780 Arl15-201ENSMUST00000091201 3364 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Col8a1Q00780 Nlrp3-201ENSMUST00000079476 3933 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Col8a1Q00780 Gm43750-201ENSMUST00000199027 2493 ntBASIC6.95□□□□□ -1.3
Col8a1Q00780 Adgrl2-214ENSMUST00000199238 4670 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
Col8a1Q00780 Gm31267-201ENSMUST00000218941 1397 ntTSL 3 BASIC6.95□□□□□ -1.3
Col8a1Q00780 Pik3cg-207ENSMUST00000220366 4660 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Col8a1Q00780 Apbb2-204ENSMUST00000159786 6333 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Col8a1Q00780 Lpin1-202ENSMUST00000111067 5433 ntAPPRIS P4 TSL 1 (best) BASIC6.95□□□□□ -1.3
Col8a1Q00780 Prrg1-202ENSMUST00000114025 3964 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Col8a1Q00780 Synj1-210ENSMUST00000170853 7012 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
Col8a1Q00780 Prkaa2-201ENSMUST00000030243 7969 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Col8a1Q00780 Pm20d1-202ENSMUST00000112393 6900 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Col8a1Q00780 Sf3b1-201ENSMUST00000027127 6195 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Col8a1Q00780 Tifab-201ENSMUST00000169652 3349 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Col8a1Q00780 Gm44742-201ENSMUST00000207190 1412 ntBASIC6.95□□□□□ -1.3
Col8a1Q00780 Ccl20-201ENSMUST00000027351 1417 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Col8a1Q00780 Nr3c1-202ENSMUST00000097592 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
Col8a1Q00780 Agbl4-206ENSMUST00000106592 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
Col8a1Q00780 Gm37074-201ENSMUST00000193444 1843 ntBASIC6.95□□□□□ -1.3
Col8a1Q00780 Map1b-201ENSMUST00000064762 11808 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Col8a1Q00780 Gm7328-201ENSMUST00000211123 2225 ntBASIC6.95□□□□□ -1.3
Col8a1Q00780 Casp14-202ENSMUST00000219237 2200 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
Col8a1Q00780 Prex2-201ENSMUST00000027056 11053 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Col8a1Q00780 Hmgn2-202ENSMUST00000102552 676 ntAPPRIS P2 TSL 2 BASIC6.95□□□□□ -1.3
Col8a1Q00780 Trav5-4-201ENSMUST00000103664 343 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
Col8a1Q00780 Gm25725-201ENSMUST00000104528 130 ntBASIC6.95□□□□□ -1.3
Col8a1Q00780 Omt2a-202ENSMUST00000113376 478 ntAPPRIS ALT2 TSL 3 BASIC6.95□□□□□ -1.3
Col8a1Q00780 Gm14283-201ENSMUST00000119763 325 ntBASIC6.95□□□□□ -1.3
Col8a1Q00780 Rpl9-ps2-201ENSMUST00000120821 577 ntBASIC6.95□□□□□ -1.3
Col8a1Q00780 Gm11446-201ENSMUST00000121319 866 ntBASIC6.95□□□□□ -1.3
Col8a1Q00780 Mir1900-201ENSMUST00000122714 78 ntBASIC6.95□□□□□ -1.3
Col8a1Q00780 A330102I10Rik-201ENSMUST00000130109 501 ntTSL 2 BASIC6.95□□□□□ -1.3
Col8a1Q00780 Gm15527-201ENSMUST00000138259 858 ntTSL 3 BASIC6.95□□□□□ -1.3
Col8a1Q00780 Olfr819-201ENSMUST00000167974 963 ntAPPRIS P2 BASIC6.95□□□□□ -1.3
Col8a1Q00780 Ly6k-202ENSMUST00000168815 612 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Col8a1Q00780 Cfhr3-201ENSMUST00000170441 1022 ntBASIC6.95□□□□□ -1.3
Col8a1Q00780 Olfr247-201ENSMUST00000170920 963 ntAPPRIS ALT2 BASIC6.95□□□□□ -1.3
Col8a1Q00780 Svs5-201ENSMUST00000017148 628 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Col8a1Q00780 Gm8307-201ENSMUST00000187682 1150 ntBASIC6.95□□□□□ -1.3
Col8a1Q00780 Gm29161-201ENSMUST00000188250 699 ntBASIC6.95□□□□□ -1.3
Col8a1Q00780 Gm5268-201ENSMUST00000189212 940 ntBASIC6.95□□□□□ -1.3
Col8a1Q00780 Gm37339-201ENSMUST00000194142 392 ntBASIC6.95□□□□□ -1.3
Col8a1Q00780 Gm26413-201ENSMUST00000196783 126 ntBASIC6.95□□□□□ -1.3
Col8a1Q00780 Gm43033-201ENSMUST00000199682 425 ntBASIC6.95□□□□□ -1.3
Col8a1Q00780 Ociad1-204ENSMUST00000200935 1139 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Col8a1Q00780 Gm7542-201ENSMUST00000201140 777 ntBASIC6.95□□□□□ -1.3
Col8a1Q00780 Gm18690-201ENSMUST00000204488 985 ntBASIC6.95□□□□□ -1.3
Col8a1Q00780 Gm44366-201ENSMUST00000204933 674 ntTSL 3 BASIC6.95□□□□□ -1.3
Col8a1Q00780 Gm44213-201ENSMUST00000204977 703 ntBASIC6.95□□□□□ -1.3
Col8a1Q00780 Gm44656-201ENSMUST00000208428 490 ntBASIC6.95□□□□□ -1.3
Col8a1Q00780 Gm6145-202ENSMUST00000210292 787 ntTSL 5 BASIC6.95□□□□□ -1.3
Col8a1Q00780 Olfr540-ps1-201ENSMUST00000210499 612 ntBASIC6.95□□□□□ -1.3
Col8a1Q00780 Gm45334-201ENSMUST00000211118 1227 ntTSL 5 BASIC6.95□□□□□ -1.3
Col8a1Q00780 AC132474.3-201ENSMUST00000213244 383 ntTSL 5 BASIC6.95□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 68.6 ms