Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Gm29046-201ENSMUST00000188653 2167 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Cdh23Q99PF4 Gm28346-201ENSMUST00000189021 2167 ntTSL 5 BASIC7.51□□□□□ -1.21
Cdh23Q99PF4 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Cdh23Q99PF4 Hadha-205ENSMUST00000156859 4017 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Cdh23Q99PF4 Gm43219-201ENSMUST00000197972 1937 ntBASIC7.51□□□□□ -1.21
Cdh23Q99PF4 Fam229b-202ENSMUST00000124941 721 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Cdh23Q99PF4 4931428L18Rik-201ENSMUST00000127775 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC7.51□□□□□ -1.21
Cdh23Q99PF4 Gm12148-201ENSMUST00000153791 292 ntTSL 3 BASIC7.51□□□□□ -1.21
Cdh23Q99PF4 Gm43459-201ENSMUST00000202093 331 ntBASIC7.51□□□□□ -1.21
Cdh23Q99PF4 1700013A02Rik-201ENSMUST00000202969 645 ntBASIC7.51□□□□□ -1.21
Cdh23Q99PF4 1810049I09Rik-201ENSMUST00000205499 453 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Cdh23Q99PF4 AC166902.2-201ENSMUST00000215193 837 ntTSL 5 BASIC7.51□□□□□ -1.21
Cdh23Q99PF4 Gm5928-201ENSMUST00000221839 466 ntBASIC7.51□□□□□ -1.21
Cdh23Q99PF4 AC121542.2-201ENSMUST00000227529 400 ntBASIC7.51□□□□□ -1.21
Cdh23Q99PF4 Tcl1b2-201ENSMUST00000081379 1009 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Cdh23Q99PF4 Gm156-201ENSMUST00000095409 682 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Cdh23Q99PF4 Eif4e2-207ENSMUST00000113235 3473 ntTSL 5 BASIC7.51□□□□□ -1.21
Cdh23Q99PF4 Vwde-201ENSMUST00000054530 3979 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Cdh23Q99PF4 Gpat4-201ENSMUST00000167004 5518 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Cdh23Q99PF4 6030443J06Rik-203ENSMUST00000181764 4299 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
Cdh23Q99PF4 Gm14896-201ENSMUST00000121311 1351 ntBASIC7.5□□□□□ -1.21
Cdh23Q99PF4 Ccdc7a-202ENSMUST00000108747 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC7.5□□□□□ -1.21
Cdh23Q99PF4 Gm3033-201ENSMUST00000112792 438 ntAPPRIS P1 TSL 5 BASIC7.5□□□□□ -1.21
Cdh23Q99PF4 Gm13991-201ENSMUST00000120190 648 ntBASIC7.5□□□□□ -1.21
Cdh23Q99PF4 Gm16188-201ENSMUST00000142019 420 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
Cdh23Q99PF4 Rd3l-201ENSMUST00000170525 984 ntAPPRIS P1 TSL 2 BASIC7.5□□□□□ -1.21
Cdh23Q99PF4 1110008L16Rik-203ENSMUST00000183654 943 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
Cdh23Q99PF4 Gm27507-201ENSMUST00000184199 93 ntBASIC7.5□□□□□ -1.21
Cdh23Q99PF4 4930518I17Rik-201ENSMUST00000203902 656 ntBASIC7.5□□□□□ -1.21
Cdh23Q99PF4 Gm6990-201ENSMUST00000086830 348 ntBASIC7.5□□□□□ -1.21
Cdh23Q99PF4 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Cdh23Q99PF4 Gfm2-209ENSMUST00000161825 4416 ntTSL 2 BASIC7.5□□□□□ -1.21
Cdh23Q99PF4 AC187103.1-201ENSMUST00000224641 1475 ntBASIC7.5□□□□□ -1.21
Cdh23Q99PF4 Sirpb1c-201ENSMUST00000050623 1499 ntAPPRIS P2 TSL 1 (best) BASIC7.5□□□□□ -1.21
Cdh23Q99PF4 Slc5a6-205ENSMUST00000202520 3248 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Cdh23Q99PF4 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC7.5□□□□□ -1.21
Cdh23Q99PF4 Gm37675-201ENSMUST00000192303 2847 ntBASIC7.5□□□□□ -1.21
Cdh23Q99PF4 Capn15-204ENSMUST00000212149 4555 ntAPPRIS P3 TSL 5 BASIC7.5□□□□□ -1.21
Cdh23Q99PF4 Cxcr2-202ENSMUST00000106899 3046 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Cdh23Q99PF4 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC7.5□□□□□ -1.21
Cdh23Q99PF4 Trdv2-2-201ENSMUST00000103678 397 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
Cdh23Q99PF4 Gm22194-201ENSMUST00000116869 95 ntBASIC7.5□□□□□ -1.21
Cdh23Q99PF4 Gm16336-201ENSMUST00000126011 380 ntTSL 2 BASIC7.5□□□□□ -1.21
Cdh23Q99PF4 Gm22701-201ENSMUST00000175371 291 ntBASIC7.5□□□□□ -1.21
Cdh23Q99PF4 Gm7499-201ENSMUST00000210423 813 ntBASIC7.5□□□□□ -1.21
Cdh23Q99PF4 Olfr517-201ENSMUST00000084753 1055 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
Cdh23Q99PF4 Gm40987-202ENSMUST00000221856 1588 ntTSL 5 BASIC7.5□□□□□ -1.21
Cdh23Q99PF4 Smarcal1-201ENSMUST00000047615 3059 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Cdh23Q99PF4 Pknox1-201ENSMUST00000097352 4172 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Cdh23Q99PF4 C1qtnf7-201ENSMUST00000076939 3879 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
Cdh23Q99PF4 F830045P16Rik-201ENSMUST00000050309 1925 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Cdh23Q99PF4 Gm13986-202ENSMUST00000148587 3469 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
Cdh23Q99PF4 Gm26645-201ENSMUST00000181076 1316 ntBASIC7.5□□□□□ -1.21
Cdh23Q99PF4 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Cdh23Q99PF4 Igkv6-20-201ENSMUST00000103388 375 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
Cdh23Q99PF4 Trappc1-204ENSMUST00000108662 635 ntTSL 2 BASIC7.5□□□□□ -1.21
Cdh23Q99PF4 Ighv2-9-1-201ENSMUST00000180013 369 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
Cdh23Q99PF4 Gm28351-201ENSMUST00000186261 559 ntTSL 5 BASIC7.5□□□□□ -1.21
Cdh23Q99PF4 Speer9-ps1-201ENSMUST00000203447 775 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
Cdh23Q99PF4 Gm18012-201ENSMUST00000204558 773 ntBASIC7.5□□□□□ -1.21
Cdh23Q99PF4 Gm34263-202ENSMUST00000214353 303 ntTSL 5 BASIC7.5□□□□□ -1.21
Cdh23Q99PF4 AC153821.1-201ENSMUST00000217893 581 ntTSL 2 BASIC7.5□□□□□ -1.21
Cdh23Q99PF4 Gm18631-201ENSMUST00000223125 1043 ntBASIC7.5□□□□□ -1.21
Cdh23Q99PF4 Ninj2-201ENSMUST00000035244 823 ntAPPRIS ALT2 TSL 2 BASIC7.5□□□□□ -1.21
Cdh23Q99PF4 Dnmbp-203ENSMUST00000212048 4186 ntTSL 5 BASIC7.49□□□□□ -1.21
Cdh23Q99PF4 Lca5-201ENSMUST00000034791 4160 ntAPPRIS P4 TSL 1 (best) BASIC7.49□□□□□ -1.21
Cdh23Q99PF4 Ccdc158-201ENSMUST00000060930 3676 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Cdh23Q99PF4 Vmn1r40-204ENSMUST00000228485 2689 ntBASIC7.49□□□□□ -1.21
Cdh23Q99PF4 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Cdh23Q99PF4 Gm32568-201ENSMUST00000212782 1421 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Cdh23Q99PF4 Gpr63-201ENSMUST00000038920 2370 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Cdh23Q99PF4 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC7.49□□□□□ -1.21
Cdh23Q99PF4 6820431F20Rik-202ENSMUST00000153748 4659 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Cdh23Q99PF4 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC7.49□□□□□ -1.21
Cdh23Q99PF4 5430427O19Rik-201ENSMUST00000113976 3754 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Cdh23Q99PF4 Gm24069-201ENSMUST00000104512 127 ntBASIC7.49□□□□□ -1.21
Cdh23Q99PF4 Slc35a5-202ENSMUST00000114600 679 ntTSL 3 BASIC7.49□□□□□ -1.21
Cdh23Q99PF4 Mup-ps16-201ENSMUST00000120085 596 ntBASIC7.49□□□□□ -1.21
Cdh23Q99PF4 Gm14712-201ENSMUST00000120195 772 ntBASIC7.49□□□□□ -1.21
Cdh23Q99PF4 Dmrtc1a-203ENSMUST00000120808 1061 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Cdh23Q99PF4 Gm12506-201ENSMUST00000123620 806 ntTSL 5 BASIC7.49□□□□□ -1.21
Cdh23Q99PF4 Gm16231-201ENSMUST00000160432 319 ntTSL 3 BASIC7.49□□□□□ -1.21
Cdh23Q99PF4 Gm27512-201ENSMUST00000175328 126 ntBASIC7.49□□□□□ -1.21
Cdh23Q99PF4 Gm29354-201ENSMUST00000187613 696 ntBASIC7.49□□□□□ -1.21
Cdh23Q99PF4 Fcer1g-203ENSMUST00000193973 683 ntTSL 3 BASIC7.49□□□□□ -1.21
Cdh23Q99PF4 Gm30517-201ENSMUST00000197350 772 ntBASIC7.49□□□□□ -1.21
Cdh23Q99PF4 AC104906.1-201ENSMUST00000218122 913 ntBASIC7.49□□□□□ -1.21
Cdh23Q99PF4 Mapk9-202ENSMUST00000043321 1297 ntAPPRIS ALT1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Cdh23Q99PF4 Gm28322-201ENSMUST00000185627 1475 ntBASIC7.49□□□□□ -1.21
Cdh23Q99PF4 Snrpb2-201ENSMUST00000008477 2061 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Cdh23Q99PF4 Rad50-201ENSMUST00000020649 5153 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Cdh23Q99PF4 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Cdh23Q99PF4 2610203C22Rik-204ENSMUST00000148585 3475 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Cdh23Q99PF4 Champ1-202ENSMUST00000128557 3977 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Cdh23Q99PF4 Gm5157-201ENSMUST00000185914 1581 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Cdh23Q99PF4 Morc2b-201ENSMUST00000053896 3712 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Cdh23Q99PF4 Gm6866-201ENSMUST00000188559 2549 ntBASIC7.49□□□□□ -1.21
Cdh23Q99PF4 AC154522.1-201ENSMUST00000224647 1903 ntBASIC7.49□□□□□ -1.21
Cdh23Q99PF4 Dst-205ENSMUST00000182314 2643 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Cdh23Q99PF4 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC7.49□□□□□ -1.21
Retrieved 100 of 76,532 protein–RNA pairs in 159.2 ms