Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 AC105958.1-201ENSMUST00000214783 2144 ntBASIC9.2□□□□□ -0.94
Vps54Q5SPW0 Dis3l-202ENSMUST00000113890 3224 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Vps54Q5SPW0 Ankrd6-203ENSMUST00000084749 4573 ntAPPRIS P2 TSL 5 BASIC9.2□□□□□ -0.94
Vps54Q5SPW0 Depdc5-205ENSMUST00000120902 5195 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
Vps54Q5SPW0 Epha7-202ENSMUST00000080934 2880 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Vps54Q5SPW0 Pfkfb3-201ENSMUST00000028114 4712 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Vps54Q5SPW0 Nolc1-201ENSMUST00000165017 3634 ntAPPRIS P2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Vps54Q5SPW0 Phc3-206ENSMUST00000129817 3019 ntAPPRIS P3 TSL 1 (best) BASIC9.2□□□□□ -0.94
Vps54Q5SPW0 Olfr478-202ENSMUST00000210173 2477 ntAPPRIS P1 TSL 3 BASIC9.2□□□□□ -0.94
Vps54Q5SPW0 Arpp21-202ENSMUST00000070218 3181 ntTSL 5 BASIC9.2□□□□□ -0.94
Vps54Q5SPW0 Gm6746-201ENSMUST00000108774 483 ntBASIC9.2□□□□□ -0.94
Vps54Q5SPW0 Omt2a-202ENSMUST00000113376 478 ntAPPRIS ALT2 TSL 3 BASIC9.2□□□□□ -0.94
Vps54Q5SPW0 Gm7091-201ENSMUST00000116438 586 ntBASIC9.2□□□□□ -0.94
Vps54Q5SPW0 Gm22152-201ENSMUST00000116966 125 ntBASIC9.2□□□□□ -0.94
Vps54Q5SPW0 Gm5228-201ENSMUST00000117186 357 ntBASIC9.2□□□□□ -0.94
Vps54Q5SPW0 Gm11416-201ENSMUST00000119111 863 ntBASIC9.2□□□□□ -0.94
Vps54Q5SPW0 Gm14826-201ENSMUST00000121284 901 ntBASIC9.2□□□□□ -0.94
Vps54Q5SPW0 1810062O18Rik-204ENSMUST00000141265 751 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Vps54Q5SPW0 AW495222-202ENSMUST00000149839 868 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Vps54Q5SPW0 Gm15904-201ENSMUST00000154515 487 ntTSL 3 BASIC9.2□□□□□ -0.94
Vps54Q5SPW0 Gm23187-201ENSMUST00000175746 86 ntBASIC9.2□□□□□ -0.94
Vps54Q5SPW0 Gm7436-201ENSMUST00000187229 391 ntBASIC9.2□□□□□ -0.94
Vps54Q5SPW0 Gm37585-201ENSMUST00000195440 280 ntBASIC9.2□□□□□ -0.94
Vps54Q5SPW0 Gm31305-201ENSMUST00000198557 710 ntTSL 3 BASIC9.2□□□□□ -0.94
Vps54Q5SPW0 Gm44287-201ENSMUST00000203069 290 ntTSL 3 BASIC9.2□□□□□ -0.94
Vps54Q5SPW0 Gm18765-201ENSMUST00000203166 660 ntBASIC9.2□□□□□ -0.94
Vps54Q5SPW0 Gm18484-201ENSMUST00000204389 991 ntBASIC9.2□□□□□ -0.94
Vps54Q5SPW0 Hba-x-201ENSMUST00000020531 801 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Vps54Q5SPW0 CT025685.1-201ENSMUST00000213716 150 ntBASIC9.2□□□□□ -0.94
Vps54Q5SPW0 AC144783.1-201ENSMUST00000219103 960 ntBASIC9.2□□□□□ -0.94
Vps54Q5SPW0 Clec4n-201ENSMUST00000024118 1229 ntAPPRIS P3 TSL 1 (best) BASIC9.2□□□□□ -0.94
Vps54Q5SPW0 Gng2-201ENSMUST00000055100 572 ntAPPRIS P1 TSL 3 BASIC9.2□□□□□ -0.94
Vps54Q5SPW0 Efna5-202ENSMUST00000078839 643 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Vps54Q5SPW0 Vmn1r196-201ENSMUST00000091735 906 ntAPPRIS P2 BASIC9.2□□□□□ -0.94
Vps54Q5SPW0 Npr3-204ENSMUST00000228489 1969 ntBASIC9.2□□□□□ -0.94
Vps54Q5SPW0 Elk3-204ENSMUST00000151153 1336 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Vps54Q5SPW0 Prkacb-201ENSMUST00000005164 4001 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Vps54Q5SPW0 Zkscan7-201ENSMUST00000063980 4722 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Vps54Q5SPW0 Msantd4-201ENSMUST00000047173 2731 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Vps54Q5SPW0 Gm10248-201ENSMUST00000090409 2731 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Vps54Q5SPW0 Olfr1278-206ENSMUST00000216229 6819 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
Vps54Q5SPW0 Gm8127-201ENSMUST00000163655 1427 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
Vps54Q5SPW0 Phf3-205ENSMUST00000186733 7567 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
Vps54Q5SPW0 Gm884-202ENSMUST00000167262 4576 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Vps54Q5SPW0 Col12a1-201ENSMUST00000071750 11511 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
Vps54Q5SPW0 Gm28649-201ENSMUST00000189153 1581 ntBASIC9.2□□□□□ -0.94
Vps54Q5SPW0 Zfp386-204ENSMUST00000183125 4779 ntAPPRIS P3 TSL 1 (best) BASIC9.2□□□□□ -0.94
Vps54Q5SPW0 Dpy19l3-201ENSMUST00000051377 8006 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Vps54Q5SPW0 Gcsam-201ENSMUST00000023339 3315 ntAPPRIS P3 TSL 1 (best) BASIC9.2□□□□□ -0.94
Vps54Q5SPW0 Musk-201ENSMUST00000081919 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Vps54Q5SPW0 Tmprss11e-201ENSMUST00000161306 3416 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Vps54Q5SPW0 Gm42546-201ENSMUST00000201584 2592 ntBASIC9.19□□□□□ -0.94
Vps54Q5SPW0 4930528G23Rik-201ENSMUST00000124575 1723 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Vps54Q5SPW0 Iars-206ENSMUST00000165316 4426 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Vps54Q5SPW0 Spic-201ENSMUST00000004473 1763 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Vps54Q5SPW0 Sbf2-201ENSMUST00000033058 7154 ntAPPRIS P2 TSL 5 BASIC9.19□□□□□ -0.94
Vps54Q5SPW0 Gm38380-201ENSMUST00000195718 2248 ntBASIC9.19□□□□□ -0.94
Vps54Q5SPW0 Lockd-201ENSMUST00000183867 5662 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Vps54Q5SPW0 Rnf213-203ENSMUST00000172235 2422 ntTSL 5 BASIC9.19□□□□□ -0.94
Vps54Q5SPW0 Gas2l3-202ENSMUST00000105298 6305 ntAPPRIS P2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Vps54Q5SPW0 Ola1-203ENSMUST00000112055 1251 ntTSL 5 BASIC9.19□□□□□ -0.94
Vps54Q5SPW0 Gm13163-201ENSMUST00000119875 336 ntBASIC9.19□□□□□ -0.94
Vps54Q5SPW0 Gm25780-201ENSMUST00000122528 253 ntBASIC9.19□□□□□ -0.94
Vps54Q5SPW0 Gm16276-201ENSMUST00000131218 262 ntBASIC9.19□□□□□ -0.94
Vps54Q5SPW0 Gm13427-201ENSMUST00000154296 794 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Vps54Q5SPW0 Gm9423-201ENSMUST00000183173 997 ntBASIC9.19□□□□□ -0.94
Vps54Q5SPW0 Gm37724-201ENSMUST00000195240 1221 ntBASIC9.19□□□□□ -0.94
Vps54Q5SPW0 Gm42823-201ENSMUST00000197975 256 ntTSL 3 BASIC9.19□□□□□ -0.94
Vps54Q5SPW0 Dcp2-202ENSMUST00000202306 398 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Vps54Q5SPW0 4930425L21Rik-201ENSMUST00000203439 899 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Vps54Q5SPW0 AC163296.1-202ENSMUST00000218395 661 ntBASIC9.19□□□□□ -0.94
Vps54Q5SPW0 AC167222.1-201ENSMUST00000219379 660 ntTSL 2 BASIC9.19□□□□□ -0.94
Vps54Q5SPW0 AC163296.1-201ENSMUST00000220004 1266 ntBASIC9.19□□□□□ -0.94
Vps54Q5SPW0 AC158535.1-201ENSMUST00000221487 769 ntTSL 5 BASIC9.19□□□□□ -0.94
Vps54Q5SPW0 Gm33467-201ENSMUST00000221885 652 ntTSL 3 BASIC9.19□□□□□ -0.94
Vps54Q5SPW0 Cst11-201ENSMUST00000028934 615 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Vps54Q5SPW0 Depdc5-204ENSMUST00000119705 7929 ntAPPRIS P2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Vps54Q5SPW0 Gm19031-201ENSMUST00000176280 1365 ntBASIC9.19□□□□□ -0.94
Vps54Q5SPW0 Mettl6-205ENSMUST00000227777 2762 ntAPPRIS ALT2 BASIC9.19□□□□□ -0.94
Vps54Q5SPW0 Vmn1r51-208ENSMUST00000227876 4160 ntAPPRIS P1 BASIC9.19□□□□□ -0.94
Vps54Q5SPW0 Spp1-201ENSMUST00000031243 1410 ntAPPRIS P3 TSL 1 (best) BASIC9.19□□□□□ -0.94
Vps54Q5SPW0 C1s1-204ENSMUST00000162443 2906 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Vps54Q5SPW0 Brd8-202ENSMUST00000097626 3005 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Vps54Q5SPW0 Ceacam1-208ENSMUST00000206676 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Vps54Q5SPW0 Cts7-201ENSMUST00000021892 1518 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Vps54Q5SPW0 AC154347.1-201ENSMUST00000221358 3105 ntBASIC9.19□□□□□ -0.94
Vps54Q5SPW0 Tg-201ENSMUST00000065916 8454 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Vps54Q5SPW0 Rasef-202ENSMUST00000102837 5158 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Vps54Q5SPW0 9130023H24Rik-201ENSMUST00000078816 3574 ntAPPRIS P1 BASIC9.19□□□□□ -0.94
Vps54Q5SPW0 Il15ra-214ENSMUST00000138349 1936 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Vps54Q5SPW0 Olfr622-204ENSMUST00000216570 2149 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
Vps54Q5SPW0 Eps15-204ENSMUST00000132165 2295 ntAPPRIS ALT2 TSL 5 BASIC9.19□□□□□ -0.94
Vps54Q5SPW0 Far1-201ENSMUST00000033018 4962 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Vps54Q5SPW0 Gm38043-201ENSMUST00000195501 5141 ntBASIC9.18□□□□□ -0.94
Vps54Q5SPW0 Lyg2-201ENSMUST00000078307 2564 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Vps54Q5SPW0 Rad54l-201ENSMUST00000102704 3025 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Vps54Q5SPW0 Fblim1-201ENSMUST00000006381 3101 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Vps54Q5SPW0 Gm10637-202ENSMUST00000184702 3233 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Vps54Q5SPW0 Ppfibp2-201ENSMUST00000040056 3310 ntAPPRIS P3 TSL 1 (best) BASIC9.18□□□□□ -0.94
Vps54Q5SPW0 Siae-204ENSMUST00000215474 4947 ntAPPRIS P2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 66.5 ms