Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Zfp467-207ENSMUST00000114563 463 ntTSL 5 BASIC8.8□□□□□ -1
Hmgb1P63158 Gm15078-201ENSMUST00000118371 782 ntBASIC8.8□□□□□ -1
Hmgb1P63158 Gm13702-201ENSMUST00000118542 825 ntBASIC8.8□□□□□ -1
Hmgb1P63158 Gm14170-201ENSMUST00000133751 331 ntTSL 3 BASIC8.8□□□□□ -1
Hmgb1P63158 Pitpnm2os2-202ENSMUST00000162577 744 ntTSL 3 BASIC8.8□□□□□ -1
Hmgb1P63158 Gm16494-201ENSMUST00000165525 261 ntAPPRIS P1 BASIC8.8□□□□□ -1
Hmgb1P63158 Gm5696-201ENSMUST00000189850 552 ntBASIC8.8□□□□□ -1
Hmgb1P63158 Gm29145-201ENSMUST00000189914 456 ntBASIC8.8□□□□□ -1
Hmgb1P63158 Gm38033-201ENSMUST00000192037 269 ntTSL 5 BASIC8.8□□□□□ -1
Hmgb1P63158 Gm43743-201ENSMUST00000197898 697 ntBASIC8.8□□□□□ -1
Hmgb1P63158 Trav22-201ENSMUST00000198117 346 ntBASIC8.8□□□□□ -1
Hmgb1P63158 Igkv8-22-201ENSMUST00000199501 367 ntBASIC8.8□□□□□ -1
Hmgb1P63158 1700040L08Rik-201ENSMUST00000205011 541 ntTSL 1 (best) BASIC8.8□□□□□ -1
Hmgb1P63158 CT033774.2-201ENSMUST00000222079 256 ntBASIC8.8□□□□□ -1
Hmgb1P63158 AC154528.3-201ENSMUST00000228011 679 ntBASIC8.8□□□□□ -1
Hmgb1P63158 Polr2k-201ENSMUST00000057177 601 ntTSL 1 (best) BASIC8.8□□□□□ -1
Hmgb1P63158 Olfr401-201ENSMUST00000079827 948 ntAPPRIS P1 BASIC8.8□□□□□ -1
Hmgb1P63158 Olfr293-201ENSMUST00000081474 1011 ntAPPRIS P1 BASIC8.8□□□□□ -1
Hmgb1P63158 Gm5975-201ENSMUST00000185256 1399 ntBASIC8.8□□□□□ -1
Hmgb1P63158 Gm46995-201ENSMUST00000223445 1378 ntBASIC8.8□□□□□ -1
Hmgb1P63158 AC123665.5-201ENSMUST00000226648 1392 ntBASIC8.8□□□□□ -1
Hmgb1P63158 Calr4-203ENSMUST00000106629 1583 ntTSL 1 (best) BASIC8.8□□□□□ -1
Hmgb1P63158 Olfr1315-ps1-203ENSMUST00000217078 1559 ntAPPRIS P5 TSL 5 BASIC8.8□□□□□ -1
Hmgb1P63158 4933430I17Rik-201ENSMUST00000062145 1783 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Hmgb1P63158 Naip1-202ENSMUST00000221727 1968 ntTSL 1 (best) BASIC8.8□□□□□ -1
Hmgb1P63158 Gm14471-201ENSMUST00000141035 2358 ntTSL 1 (best) BASIC8.8□□□□□ -1
Hmgb1P63158 Lyg2-201ENSMUST00000078307 2564 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Hmgb1P63158 Tmc2-202ENSMUST00000166774 2667 ntAPPRIS P1 TSL 2 BASIC8.8□□□□□ -1
Hmgb1P63158 Gm37326-201ENSMUST00000192828 3071 ntBASIC8.8□□□□□ -1
Hmgb1P63158 Ptch1-202ENSMUST00000192155 7002 ntAPPRIS ALT2 TSL 5 BASIC8.8□□□□□ -1
Hmgb1P63158 2010110K18Rik-201ENSMUST00000181453 2400 ntTSL 1 (best) BASIC8.8□□□□□ -1
Hmgb1P63158 Hnrnpa3-203ENSMUST00000111962 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
Hmgb1P63158 Gm14762-202ENSMUST00000122953 1430 ntTSL 1 (best) BASIC8.8□□□□□ -1
Hmgb1P63158 Zfp825-202ENSMUST00000202645 1406 ntAPPRIS P2 TSL 1 (best) BASIC8.8□□□□□ -1
Hmgb1P63158 1700010N08Rik-202ENSMUST00000188166 1323 ntTSL 1 (best) BASIC8.8□□□□□ -1
Hmgb1P63158 Myof-211ENSMUST00000226068 6633 ntAPPRIS ALT2 BASIC8.8□□□□□ -1
Hmgb1P63158 Dlgap2-201ENSMUST00000043279 3580 ntAPPRIS ALT2 TSL 5 BASIC8.79□□□□□ -1
Hmgb1P63158 Tpd52l2-204ENSMUST00000108800 3475 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Hmgb1P63158 E430021H15Rik-201ENSMUST00000198875 3459 ntBASIC8.79□□□□□ -1
Hmgb1P63158 Pp2d1-201ENSMUST00000056198 2476 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Hmgb1P63158 Chrm2-202ENSMUST00000172278 5676 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Hmgb1P63158 Gm45061-201ENSMUST00000204395 2095 ntBASIC8.79□□□□□ -1
Hmgb1P63158 Prss35-201ENSMUST00000036426 3444 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Hmgb1P63158 AC158982.1-205ENSMUST00000227339 1876 ntBASIC8.79□□□□□ -1
Hmgb1P63158 Gm43430-201ENSMUST00000196513 3897 ntBASIC8.79□□□□□ -1
Hmgb1P63158 Fbxw7-202ENSMUST00000107675 3599 ntAPPRIS ALT1 TSL 5 BASIC8.79□□□□□ -1
Hmgb1P63158 Grm8-203ENSMUST00000115324 3299 ntAPPRIS P3 TSL 1 (best) BASIC8.79□□□□□ -1
Hmgb1P63158 Gm3742-201ENSMUST00000220907 1391 ntBASIC8.79□□□□□ -1
Hmgb1P63158 Gngt2-202ENSMUST00000100532 573 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Hmgb1P63158 Rhox4c-201ENSMUST00000115183 903 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Hmgb1P63158 Gm13679-201ENSMUST00000118678 484 ntBASIC8.79□□□□□ -1
Hmgb1P63158 Kxd1-203ENSMUST00000118850 992 ntTSL 2 BASIC8.79□□□□□ -1
Hmgb1P63158 Gm14227-201ENSMUST00000119431 629 ntBASIC8.79□□□□□ -1
Hmgb1P63158 Olfr1379-ps1-201ENSMUST00000120726 1001 ntBASIC8.79□□□□□ -1
Hmgb1P63158 Acss2os-201ENSMUST00000148685 629 ntTSL 1 (best) BASIC8.79□□□□□ -1
Hmgb1P63158 Rsrc1-209ENSMUST00000162693 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
Hmgb1P63158 Gm17188-202ENSMUST00000165178 680 ntTSL 1 (best) BASIC8.79□□□□□ -1
Hmgb1P63158 Gm933-201ENSMUST00000179384 679 ntAPPRIS P1 TSL 2 BASIC8.79□□□□□ -1
Hmgb1P63158 4933406F09Rik-202ENSMUST00000180508 680 ntTSL 1 (best) BASIC8.79□□□□□ -1
Hmgb1P63158 Gm7132-201ENSMUST00000182302 984 ntBASIC8.79□□□□□ -1
Hmgb1P63158 Gm17828-201ENSMUST00000183380 799 ntBASIC8.79□□□□□ -1
Hmgb1P63158 Gm37214-201ENSMUST00000192860 916 ntTSL 1 (best) BASIC8.79□□□□□ -1
Hmgb1P63158 Gm37676-201ENSMUST00000195496 507 ntBASIC8.79□□□□□ -1
Hmgb1P63158 Gm42667-201ENSMUST00000196132 234 ntBASIC8.79□□□□□ -1
Hmgb1P63158 Gm42952-203ENSMUST00000197784 798 ntTSL 3 BASIC8.79□□□□□ -1
Hmgb1P63158 4933417G07Rik-201ENSMUST00000199681 1137 ntBASIC8.79□□□□□ -1
Hmgb1P63158 Rarres2-204ENSMUST00000204267 795 ntAPPRIS P3 TSL 1 (best) BASIC8.79□□□□□ -1
Hmgb1P63158 Rarres2-205ENSMUST00000204930 681 ntAPPRIS P3 TSL 2 BASIC8.79□□□□□ -1
Hmgb1P63158 Gm44690-201ENSMUST00000207984 382 ntBASIC8.79□□□□□ -1
Hmgb1P63158 Gm42402-201ENSMUST00000208341 1054 ntBASIC8.79□□□□□ -1
Hmgb1P63158 Gm8637-201ENSMUST00000212919 1085 ntBASIC8.79□□□□□ -1
Hmgb1P63158 AC156801.2-201ENSMUST00000213613 487 ntTSL 5 BASIC8.79□□□□□ -1
Hmgb1P63158 Gm9110-201ENSMUST00000219035 617 ntBASIC8.79□□□□□ -1
Hmgb1P63158 1700104L18Rik-201ENSMUST00000220132 598 ntTSL 1 (best) BASIC8.79□□□□□ -1
Hmgb1P63158 Gm21941-201ENSMUST00000221121 562 ntBASIC8.79□□□□□ -1
Hmgb1P63158 CT009713.5-201ENSMUST00000224508 909 ntBASIC8.79□□□□□ -1
Hmgb1P63158 Gm10490-201ENSMUST00000086274 360 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
Hmgb1P63158 Pcdh9-201ENSMUST00000068992 3714 ntAPPRIS P3 TSL 1 (best) BASIC8.79□□□□□ -1
Hmgb1P63158 Pfkfb3-206ENSMUST00000114846 4634 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Hmgb1P63158 Gm5431-201ENSMUST00000109209 1701 ntTSL 5 BASIC8.79□□□□□ -1
Hmgb1P63158 Gm4673-201ENSMUST00000181395 3660 ntTSL 1 (best) BASIC8.79□□□□□ -1
Hmgb1P63158 Bcas3-204ENSMUST00000108056 2925 ntTSL 1 (best) BASIC8.79□□□□□ -1
Hmgb1P63158 Brdt-202ENSMUST00000112677 1607 ntTSL 1 (best) BASIC8.79□□□□□ -1
Hmgb1P63158 Prkd3-202ENSMUST00000118768 2847 ntTSL 1 (best) BASIC8.79□□□□□ -1
Hmgb1P63158 G630018N14Rik-203ENSMUST00000221171 5888 ntTSL 1 (best) BASIC8.79□□□□□ -1
Hmgb1P63158 Asb14-201ENSMUST00000090337 2062 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
Hmgb1P63158 Cep170-212ENSMUST00000194727 6784 ntAPPRIS ALT2 TSL 5 BASIC8.79□□□□□ -1
Hmgb1P63158 Gm20707-201ENSMUST00000176201 2516 ntTSL 1 (best) BASIC8.79□□□□□ -1
Hmgb1P63158 Ezh1-203ENSMUST00000107285 4193 ntAPPRIS P2 TSL 1 (best) BASIC8.79□□□□□ -1
Hmgb1P63158 Itgb6-203ENSMUST00000112517 3537 ntTSL 1 (best) BASIC8.79□□□□□ -1
Hmgb1P63158 Grip1-208ENSMUST00000138410 3532 ntAPPRIS P3 TSL 1 (best) BASIC8.79□□□□□ -1
Hmgb1P63158 Acsm5-201ENSMUST00000066465 2981 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Hmgb1P63158 Csde1-216ENSMUST00000199571 3123 ntAPPRIS ALT2 TSL 5 BASIC8.78□□□□□ -1
Hmgb1P63158 Clec1a-201ENSMUST00000037481 3123 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Hmgb1P63158 Zfp661-202ENSMUST00000110366 4912 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Hmgb1P63158 Slc13a1-201ENSMUST00000031713 2495 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Hmgb1P63158 Cntn1-204ENSMUST00000169825 5671 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
Hmgb1P63158 Clec1a-202ENSMUST00000203162 5128 ntTSL 1 (best) BASIC8.78□□□□□ -1
Hmgb1P63158 Gm42994-201ENSMUST00000195964 2549 ntBASIC8.78□□□□□ -1
Hmgb1P63158 Olfr1426-204ENSMUST00000219005 2507 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 69.4 ms