Protein–RNA interactions for Protein: Q9WVD4

Clcn5, H(+)/Cl(-) exchange transporter 5, mousemouse

Predictions only

Length 746 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn5Q9WVD4 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
Clcn5Q9WVD4 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Clcn5Q9WVD4 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Clcn5Q9WVD4 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Clcn5Q9WVD4 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Clcn5Q9WVD4 Gm15565-201ENSMUST00000118890 427 ntBASIC19.22■□□□□ 0.67
Clcn5Q9WVD4 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC19.22■□□□□ 0.67
Clcn5Q9WVD4 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC19.22■□□□□ 0.67
Clcn5Q9WVD4 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
Clcn5Q9WVD4 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Clcn5Q9WVD4 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC19.22■□□□□ 0.67
Clcn5Q9WVD4 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Clcn5Q9WVD4 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC19.22■□□□□ 0.67
Clcn5Q9WVD4 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Clcn5Q9WVD4 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Clcn5Q9WVD4 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC19.22■□□□□ 0.67
Clcn5Q9WVD4 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Clcn5Q9WVD4 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Clcn5Q9WVD4 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
Clcn5Q9WVD4 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Clcn5Q9WVD4 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Clcn5Q9WVD4 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Clcn5Q9WVD4 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Clcn5Q9WVD4 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC19.21■□□□□ 0.67
Clcn5Q9WVD4 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC19.21■□□□□ 0.67
Clcn5Q9WVD4 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Clcn5Q9WVD4 Gm2559-201ENSMUST00000201323 363 ntBASIC19.21■□□□□ 0.67
Clcn5Q9WVD4 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Clcn5Q9WVD4 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Clcn5Q9WVD4 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Clcn5Q9WVD4 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Clcn5Q9WVD4 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Clcn5Q9WVD4 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Clcn5Q9WVD4 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Clcn5Q9WVD4 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Clcn5Q9WVD4 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Clcn5Q9WVD4 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Clcn5Q9WVD4 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Clcn5Q9WVD4 Gm42911-201ENSMUST00000199360 1630 ntBASIC19.2■□□□□ 0.66
Clcn5Q9WVD4 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Clcn5Q9WVD4 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Clcn5Q9WVD4 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Clcn5Q9WVD4 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Clcn5Q9WVD4 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Clcn5Q9WVD4 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Clcn5Q9WVD4 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Clcn5Q9WVD4 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Clcn5Q9WVD4 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Clcn5Q9WVD4 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Clcn5Q9WVD4 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC19.19■□□□□ 0.66
Clcn5Q9WVD4 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Clcn5Q9WVD4 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Clcn5Q9WVD4 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Clcn5Q9WVD4 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Clcn5Q9WVD4 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Clcn5Q9WVD4 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Clcn5Q9WVD4 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Clcn5Q9WVD4 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Clcn5Q9WVD4 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Clcn5Q9WVD4 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC19.19■□□□□ 0.66
Clcn5Q9WVD4 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Clcn5Q9WVD4 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Clcn5Q9WVD4 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Clcn5Q9WVD4 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Clcn5Q9WVD4 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Clcn5Q9WVD4 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Clcn5Q9WVD4 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Clcn5Q9WVD4 Gm45640-201ENSMUST00000210665 1896 ntBASIC19.18■□□□□ 0.66
Clcn5Q9WVD4 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Clcn5Q9WVD4 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC19.18■□□□□ 0.66
Clcn5Q9WVD4 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Clcn5Q9WVD4 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC19.18■□□□□ 0.66
Clcn5Q9WVD4 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Clcn5Q9WVD4 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Clcn5Q9WVD4 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Clcn5Q9WVD4 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Clcn5Q9WVD4 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Clcn5Q9WVD4 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Clcn5Q9WVD4 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Clcn5Q9WVD4 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Clcn5Q9WVD4 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC19.17■□□□□ 0.66
Clcn5Q9WVD4 AC121577.1-201ENSMUST00000227302 707 ntBASIC19.17■□□□□ 0.66
Clcn5Q9WVD4 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Clcn5Q9WVD4 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Clcn5Q9WVD4 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Clcn5Q9WVD4 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Clcn5Q9WVD4 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Clcn5Q9WVD4 AC131586.2-201ENSMUST00000228370 1512 ntBASIC19.16■□□□□ 0.66
Clcn5Q9WVD4 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Clcn5Q9WVD4 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Clcn5Q9WVD4 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Clcn5Q9WVD4 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Clcn5Q9WVD4 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Clcn5Q9WVD4 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC19.16■□□□□ 0.66
Clcn5Q9WVD4 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC19.16■□□□□ 0.66
Clcn5Q9WVD4 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
Clcn5Q9WVD4 Gm13509-201ENSMUST00000119733 1308 ntBASIC19.16■□□□□ 0.66
Clcn5Q9WVD4 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Clcn5Q9WVD4 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC19.16■□□□□ 0.66
Clcn5Q9WVD4 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms