Protein–RNA interactions for Protein: Q9R118

Htra1, Serine protease HTRA1, mousemouse

Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Htra1Q9R118 Gm21956-201ENSMUST00000179946 522 ntBASIC17.16■□□□□ 0.34
Htra1Q9R118 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Htra1Q9R118 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Htra1Q9R118 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Htra1Q9R118 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Htra1Q9R118 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Htra1Q9R118 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Htra1Q9R118 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Htra1Q9R118 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Htra1Q9R118 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Htra1Q9R118 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Htra1Q9R118 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Htra1Q9R118 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Htra1Q9R118 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Htra1Q9R118 Gm10209-201ENSMUST00000203397 1607 ntBASIC17.15■□□□□ 0.34
Htra1Q9R118 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Htra1Q9R118 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Htra1Q9R118 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Htra1Q9R118 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Htra1Q9R118 AC140930.3-201ENSMUST00000222935 274 ntBASIC17.15■□□□□ 0.34
Htra1Q9R118 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Htra1Q9R118 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Htra1Q9R118 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Htra1Q9R118 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC17.15■□□□□ 0.34
Htra1Q9R118 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Htra1Q9R118 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Htra1Q9R118 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Htra1Q9R118 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC17.14■□□□□ 0.33
Htra1Q9R118 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Htra1Q9R118 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Htra1Q9R118 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Htra1Q9R118 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Htra1Q9R118 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Htra1Q9R118 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Htra1Q9R118 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Htra1Q9R118 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Htra1Q9R118 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Htra1Q9R118 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC17.14■□□□□ 0.33
Htra1Q9R118 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC17.14■□□□□ 0.33
Htra1Q9R118 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Htra1Q9R118 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Htra1Q9R118 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Htra1Q9R118 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Htra1Q9R118 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Htra1Q9R118 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Htra1Q9R118 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Htra1Q9R118 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Htra1Q9R118 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Htra1Q9R118 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC17.13■□□□□ 0.33
Htra1Q9R118 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Htra1Q9R118 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Htra1Q9R118 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Htra1Q9R118 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Htra1Q9R118 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Htra1Q9R118 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC17.13■□□□□ 0.33
Htra1Q9R118 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Htra1Q9R118 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
Htra1Q9R118 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC17.13■□□□□ 0.33
Htra1Q9R118 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Htra1Q9R118 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Htra1Q9R118 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Htra1Q9R118 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Htra1Q9R118 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Htra1Q9R118 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Htra1Q9R118 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Htra1Q9R118 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Htra1Q9R118 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Htra1Q9R118 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Htra1Q9R118 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Htra1Q9R118 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC17.12■□□□□ 0.33
Htra1Q9R118 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Htra1Q9R118 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Htra1Q9R118 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Htra1Q9R118 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Htra1Q9R118 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Htra1Q9R118 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Htra1Q9R118 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Htra1Q9R118 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Htra1Q9R118 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Htra1Q9R118 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Htra1Q9R118 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Htra1Q9R118 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
Htra1Q9R118 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Htra1Q9R118 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Htra1Q9R118 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Htra1Q9R118 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Htra1Q9R118 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Htra1Q9R118 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC17.11■□□□□ 0.33
Htra1Q9R118 Gm43137-201ENSMUST00000198052 594 ntBASIC17.11■□□□□ 0.33
Htra1Q9R118 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Htra1Q9R118 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Htra1Q9R118 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Htra1Q9R118 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Htra1Q9R118 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC17.11■□□□□ 0.33
Htra1Q9R118 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
Htra1Q9R118 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Htra1Q9R118 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Htra1Q9R118 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Htra1Q9R118 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Htra1Q9R118 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 14.8 ms