Protein–RNA interactions for Protein: Q9JJN2

Zfhx4, Zinc finger homeobox protein 4, mousemouse

Predictions only

Length 3,550 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zfhx4Q9JJN2 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Zfhx4Q9JJN2 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Zfhx4Q9JJN2 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Zfhx4Q9JJN2 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC17.21■□□□□ 0.35
Zfhx4Q9JJN2 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Zfhx4Q9JJN2 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Zfhx4Q9JJN2 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC17.2■□□□□ 0.34
Zfhx4Q9JJN2 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Zfhx4Q9JJN2 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Zfhx4Q9JJN2 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Zfhx4Q9JJN2 Timm23-208ENSMUST00000226683 750 ntBASIC17.2■□□□□ 0.34
Zfhx4Q9JJN2 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Zfhx4Q9JJN2 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Zfhx4Q9JJN2 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC17.2■□□□□ 0.34
Zfhx4Q9JJN2 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Zfhx4Q9JJN2 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Zfhx4Q9JJN2 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Zfhx4Q9JJN2 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Zfhx4Q9JJN2 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Zfhx4Q9JJN2 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC17.19■□□□□ 0.34
Zfhx4Q9JJN2 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Zfhx4Q9JJN2 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
Zfhx4Q9JJN2 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Zfhx4Q9JJN2 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Zfhx4Q9JJN2 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC17.19■□□□□ 0.34
Zfhx4Q9JJN2 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Zfhx4Q9JJN2 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC17.19■□□□□ 0.34
Zfhx4Q9JJN2 Gm42545-201ENSMUST00000202755 922 ntBASIC17.19■□□□□ 0.34
Zfhx4Q9JJN2 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Zfhx4Q9JJN2 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Zfhx4Q9JJN2 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
Zfhx4Q9JJN2 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Zfhx4Q9JJN2 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Zfhx4Q9JJN2 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Zfhx4Q9JJN2 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Zfhx4Q9JJN2 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Zfhx4Q9JJN2 Mtag2-201ENSMUST00000058665 714 ntBASIC17.18■□□□□ 0.34
Zfhx4Q9JJN2 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Zfhx4Q9JJN2 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Zfhx4Q9JJN2 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC17.18■□□□□ 0.34
Zfhx4Q9JJN2 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Zfhx4Q9JJN2 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Zfhx4Q9JJN2 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Zfhx4Q9JJN2 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Zfhx4Q9JJN2 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC17.18■□□□□ 0.34
Zfhx4Q9JJN2 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Zfhx4Q9JJN2 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Zfhx4Q9JJN2 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Zfhx4Q9JJN2 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Zfhx4Q9JJN2 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Zfhx4Q9JJN2 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Zfhx4Q9JJN2 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Zfhx4Q9JJN2 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Zfhx4Q9JJN2 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Zfhx4Q9JJN2 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Zfhx4Q9JJN2 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC17.17■□□□□ 0.34
Zfhx4Q9JJN2 Gm43183-201ENSMUST00000200632 547 ntBASIC17.17■□□□□ 0.34
Zfhx4Q9JJN2 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
Zfhx4Q9JJN2 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Zfhx4Q9JJN2 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
Zfhx4Q9JJN2 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC17.16■□□□□ 0.34
Zfhx4Q9JJN2 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Zfhx4Q9JJN2 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Zfhx4Q9JJN2 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Zfhx4Q9JJN2 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Zfhx4Q9JJN2 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Zfhx4Q9JJN2 Gm18025-201ENSMUST00000221733 862 ntBASIC17.15■□□□□ 0.34
Zfhx4Q9JJN2 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Zfhx4Q9JJN2 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Zfhx4Q9JJN2 Gm11927-201ENSMUST00000118472 759 ntBASIC17.15■□□□□ 0.34
Zfhx4Q9JJN2 AC156016.1-201ENSMUST00000227190 1035 ntBASIC17.15■□□□□ 0.34
Zfhx4Q9JJN2 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Zfhx4Q9JJN2 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Zfhx4Q9JJN2 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Zfhx4Q9JJN2 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
Zfhx4Q9JJN2 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC17.15■□□□□ 0.34
Zfhx4Q9JJN2 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Zfhx4Q9JJN2 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Zfhx4Q9JJN2 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Zfhx4Q9JJN2 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Zfhx4Q9JJN2 Gm26971-201ENSMUST00000182423 1072 ntBASIC17.14■□□□□ 0.33
Zfhx4Q9JJN2 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Zfhx4Q9JJN2 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC17.14■□□□□ 0.33
Zfhx4Q9JJN2 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Zfhx4Q9JJN2 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Zfhx4Q9JJN2 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Zfhx4Q9JJN2 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Zfhx4Q9JJN2 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC17.13■□□□□ 0.33
Zfhx4Q9JJN2 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Zfhx4Q9JJN2 Gm45058-201ENSMUST00000205810 766 ntBASIC17.13■□□□□ 0.33
Zfhx4Q9JJN2 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Zfhx4Q9JJN2 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Zfhx4Q9JJN2 AC124581.1-201ENSMUST00000225416 1399 ntBASIC17.13■□□□□ 0.33
Zfhx4Q9JJN2 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Zfhx4Q9JJN2 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Zfhx4Q9JJN2 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Zfhx4Q9JJN2 Gm17661-201ENSMUST00000170317 270 ntBASIC17.13■□□□□ 0.33
Zfhx4Q9JJN2 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC17.13■□□□□ 0.33
Zfhx4Q9JJN2 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Zfhx4Q9JJN2 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms