Protein–RNA interactions for Protein: Q9EPL6

Mmp1b, Interstitial collagenase B, mousemouse

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp1bQ9EPL6 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Mmp1bQ9EPL6 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Mmp1bQ9EPL6 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Mmp1bQ9EPL6 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Mmp1bQ9EPL6 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Mmp1bQ9EPL6 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Mmp1bQ9EPL6 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Mmp1bQ9EPL6 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Mmp1bQ9EPL6 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Mmp1bQ9EPL6 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Mmp1bQ9EPL6 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Mmp1bQ9EPL6 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Mmp1bQ9EPL6 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Mmp1bQ9EPL6 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Mmp1bQ9EPL6 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Mmp1bQ9EPL6 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Mmp1bQ9EPL6 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Mmp1bQ9EPL6 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Mmp1bQ9EPL6 Gm43213-201ENSMUST00000151866 1790 ntBASIC16.33■□□□□ 0.21
Mmp1bQ9EPL6 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
Mmp1bQ9EPL6 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Mmp1bQ9EPL6 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Mmp1bQ9EPL6 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Mmp1bQ9EPL6 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Mmp1bQ9EPL6 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Mmp1bQ9EPL6 Gm7160-202ENSMUST00000188519 1027 ntBASIC16.33■□□□□ 0.2
Mmp1bQ9EPL6 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Mmp1bQ9EPL6 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Mmp1bQ9EPL6 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Mmp1bQ9EPL6 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC16.33■□□□□ 0.2
Mmp1bQ9EPL6 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Mmp1bQ9EPL6 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Mmp1bQ9EPL6 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Mmp1bQ9EPL6 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Mmp1bQ9EPL6 Gm10209-201ENSMUST00000203397 1607 ntBASIC16.33■□□□□ 0.2
Mmp1bQ9EPL6 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.2
Mmp1bQ9EPL6 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Mmp1bQ9EPL6 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC16.33■□□□□ 0.2
Mmp1bQ9EPL6 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Mmp1bQ9EPL6 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Mmp1bQ9EPL6 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Mmp1bQ9EPL6 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Mmp1bQ9EPL6 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Mmp1bQ9EPL6 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Mmp1bQ9EPL6 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Mmp1bQ9EPL6 Gm27454-201ENSMUST00000185090 204 ntBASIC16.32■□□□□ 0.2
Mmp1bQ9EPL6 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Mmp1bQ9EPL6 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Mmp1bQ9EPL6 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Mmp1bQ9EPL6 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Mmp1bQ9EPL6 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Mmp1bQ9EPL6 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Mmp1bQ9EPL6 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Mmp1bQ9EPL6 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Mmp1bQ9EPL6 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Mmp1bQ9EPL6 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC16.31■□□□□ 0.2
Mmp1bQ9EPL6 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Mmp1bQ9EPL6 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Mmp1bQ9EPL6 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Mmp1bQ9EPL6 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Mmp1bQ9EPL6 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Mmp1bQ9EPL6 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC16.31■□□□□ 0.2
Mmp1bQ9EPL6 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Mmp1bQ9EPL6 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Mmp1bQ9EPL6 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC16.31■□□□□ 0.2
Mmp1bQ9EPL6 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Mmp1bQ9EPL6 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC16.31■□□□□ 0.2
Mmp1bQ9EPL6 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC16.3■□□□□ 0.2
Mmp1bQ9EPL6 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC16.3■□□□□ 0.2
Mmp1bQ9EPL6 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Mmp1bQ9EPL6 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Mmp1bQ9EPL6 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Mmp1bQ9EPL6 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Mmp1bQ9EPL6 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Mmp1bQ9EPL6 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Mmp1bQ9EPL6 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Mmp1bQ9EPL6 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC16.3■□□□□ 0.2
Mmp1bQ9EPL6 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Mmp1bQ9EPL6 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
Mmp1bQ9EPL6 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC16.3■□□□□ 0.2
Mmp1bQ9EPL6 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Mmp1bQ9EPL6 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Mmp1bQ9EPL6 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Mmp1bQ9EPL6 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Mmp1bQ9EPL6 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Mmp1bQ9EPL6 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC16.3■□□□□ 0.2
Mmp1bQ9EPL6 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Mmp1bQ9EPL6 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
Mmp1bQ9EPL6 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Mmp1bQ9EPL6 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Mmp1bQ9EPL6 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Mmp1bQ9EPL6 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Mmp1bQ9EPL6 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Mmp1bQ9EPL6 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Mmp1bQ9EPL6 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Mmp1bQ9EPL6 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Mmp1bQ9EPL6 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Mmp1bQ9EPL6 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Mmp1bQ9EPL6 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Mmp1bQ9EPL6 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms