Protein–RNA interactions for Protein: Q9D8P7

Gtf3c6, General transcription factor 3C polypeptide 6, mousemouse

Predictions only

Length 227 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf3c6Q9D8P7 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC19.85■□□□□ 0.77
Gtf3c6Q9D8P7 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Gtf3c6Q9D8P7 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Gtf3c6Q9D8P7 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Gtf3c6Q9D8P7 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Gtf3c6Q9D8P7 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Gtf3c6Q9D8P7 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Gtf3c6Q9D8P7 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Gtf3c6Q9D8P7 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Gtf3c6Q9D8P7 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Gtf3c6Q9D8P7 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Gtf3c6Q9D8P7 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Gtf3c6Q9D8P7 Gm26971-201ENSMUST00000182423 1072 ntBASIC19.84■□□□□ 0.77
Gtf3c6Q9D8P7 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC19.84■□□□□ 0.77
Gtf3c6Q9D8P7 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Gtf3c6Q9D8P7 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Gtf3c6Q9D8P7 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
Gtf3c6Q9D8P7 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC19.83■□□□□ 0.77
Gtf3c6Q9D8P7 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
Gtf3c6Q9D8P7 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC19.83■□□□□ 0.77
Gtf3c6Q9D8P7 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.77
Gtf3c6Q9D8P7 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Gtf3c6Q9D8P7 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC19.83■□□□□ 0.77
Gtf3c6Q9D8P7 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
Gtf3c6Q9D8P7 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Gtf3c6Q9D8P7 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Gtf3c6Q9D8P7 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Gtf3c6Q9D8P7 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Gtf3c6Q9D8P7 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
Gtf3c6Q9D8P7 Gm45906-201ENSMUST00000208911 1430 ntBASIC19.83■□□□□ 0.76
Gtf3c6Q9D8P7 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC19.83■□□□□ 0.76
Gtf3c6Q9D8P7 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Gtf3c6Q9D8P7 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Gtf3c6Q9D8P7 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC19.82■□□□□ 0.76
Gtf3c6Q9D8P7 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Gtf3c6Q9D8P7 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC19.82■□□□□ 0.76
Gtf3c6Q9D8P7 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Gtf3c6Q9D8P7 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC19.81■□□□□ 0.76
Gtf3c6Q9D8P7 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Gtf3c6Q9D8P7 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Gtf3c6Q9D8P7 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Gtf3c6Q9D8P7 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Gtf3c6Q9D8P7 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Gtf3c6Q9D8P7 AC099934.2-201ENSMUST00000196389 70 ntBASIC19.81■□□□□ 0.76
Gtf3c6Q9D8P7 AC156953.1-201ENSMUST00000196953 70 ntBASIC19.81■□□□□ 0.76
Gtf3c6Q9D8P7 AC157822.2-201ENSMUST00000200291 70 ntBASIC19.81■□□□□ 0.76
Gtf3c6Q9D8P7 Gm37194-201ENSMUST00000193092 3031 ntBASIC19.81■□□□□ 0.76
Gtf3c6Q9D8P7 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC19.81■□□□□ 0.76
Gtf3c6Q9D8P7 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Gtf3c6Q9D8P7 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Gtf3c6Q9D8P7 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
Gtf3c6Q9D8P7 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Gtf3c6Q9D8P7 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Gtf3c6Q9D8P7 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Gtf3c6Q9D8P7 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Gtf3c6Q9D8P7 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Gtf3c6Q9D8P7 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Gtf3c6Q9D8P7 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Gtf3c6Q9D8P7 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Gtf3c6Q9D8P7 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Gtf3c6Q9D8P7 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Gtf3c6Q9D8P7 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Gtf3c6Q9D8P7 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Gtf3c6Q9D8P7 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Gtf3c6Q9D8P7 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Gtf3c6Q9D8P7 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Gtf3c6Q9D8P7 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Gtf3c6Q9D8P7 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Gtf3c6Q9D8P7 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Gtf3c6Q9D8P7 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Gtf3c6Q9D8P7 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Gtf3c6Q9D8P7 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Gtf3c6Q9D8P7 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Gtf3c6Q9D8P7 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Gtf3c6Q9D8P7 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Gtf3c6Q9D8P7 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC19.78■□□□□ 0.76
Gtf3c6Q9D8P7 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Gtf3c6Q9D8P7 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC19.78■□□□□ 0.76
Gtf3c6Q9D8P7 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Gtf3c6Q9D8P7 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Gtf3c6Q9D8P7 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC19.78■□□□□ 0.76
Gtf3c6Q9D8P7 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC19.78■□□□□ 0.76
Gtf3c6Q9D8P7 Gm10167-201ENSMUST00000150411 1479 ntBASIC19.78■□□□□ 0.76
Gtf3c6Q9D8P7 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Gtf3c6Q9D8P7 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Gtf3c6Q9D8P7 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Gtf3c6Q9D8P7 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Gtf3c6Q9D8P7 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Gtf3c6Q9D8P7 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Gtf3c6Q9D8P7 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Gtf3c6Q9D8P7 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Gtf3c6Q9D8P7 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC19.77■□□□□ 0.76
Gtf3c6Q9D8P7 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC19.77■□□□□ 0.76
Gtf3c6Q9D8P7 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
Gtf3c6Q9D8P7 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC19.77■□□□□ 0.76
Gtf3c6Q9D8P7 Gm42778-201ENSMUST00000199644 553 ntBASIC19.77■□□□□ 0.76
Gtf3c6Q9D8P7 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Gtf3c6Q9D8P7 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Gtf3c6Q9D8P7 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
Gtf3c6Q9D8P7 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms