Protein–RNA interactions for Protein: Q9D6Z1

Nop56, Nucleolar protein 56, mousemouse

Known RBP Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nop56Q9D6Z1 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC19.2■□□□□ 0.66
Nop56Q9D6Z1 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Nop56Q9D6Z1 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nop56Q9D6Z1 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Nop56Q9D6Z1 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nop56Q9D6Z1 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Nop56Q9D6Z1 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Nop56Q9D6Z1 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nop56Q9D6Z1 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nop56Q9D6Z1 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nop56Q9D6Z1 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC19.19■□□□□ 0.66
Nop56Q9D6Z1 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Nop56Q9D6Z1 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nop56Q9D6Z1 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nop56Q9D6Z1 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Nop56Q9D6Z1 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Nop56Q9D6Z1 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nop56Q9D6Z1 Ddx41-204ENSMUST00000224765 2199 ntBASIC19.19■□□□□ 0.66
Nop56Q9D6Z1 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nop56Q9D6Z1 Gm9954-202ENSMUST00000198686 4725 ntBASIC19.18■□□□□ 0.66
Nop56Q9D6Z1 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nop56Q9D6Z1 Gm43548-201ENSMUST00000197139 2353 ntBASIC19.18■□□□□ 0.66
Nop56Q9D6Z1 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Nop56Q9D6Z1 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nop56Q9D6Z1 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC19.18■□□□□ 0.66
Nop56Q9D6Z1 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Nop56Q9D6Z1 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC19.18■□□□□ 0.66
Nop56Q9D6Z1 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC19.18■□□□□ 0.66
Nop56Q9D6Z1 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Nop56Q9D6Z1 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nop56Q9D6Z1 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nop56Q9D6Z1 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nop56Q9D6Z1 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nop56Q9D6Z1 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC19.17■□□□□ 0.66
Nop56Q9D6Z1 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC19.17■□□□□ 0.66
Nop56Q9D6Z1 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nop56Q9D6Z1 Gm10209-201ENSMUST00000203397 1607 ntBASIC19.17■□□□□ 0.66
Nop56Q9D6Z1 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Nop56Q9D6Z1 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC19.17■□□□□ 0.66
Nop56Q9D6Z1 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Nop56Q9D6Z1 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nop56Q9D6Z1 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Nop56Q9D6Z1 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC19.16■□□□□ 0.66
Nop56Q9D6Z1 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nop56Q9D6Z1 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nop56Q9D6Z1 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Nop56Q9D6Z1 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nop56Q9D6Z1 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC19.16■□□□□ 0.66
Nop56Q9D6Z1 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nop56Q9D6Z1 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC19.16■□□□□ 0.66
Nop56Q9D6Z1 Gm9959-201ENSMUST00000068277 390 ntBASIC19.16■□□□□ 0.66
Nop56Q9D6Z1 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Nop56Q9D6Z1 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nop56Q9D6Z1 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Nop56Q9D6Z1 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nop56Q9D6Z1 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nop56Q9D6Z1 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nop56Q9D6Z1 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC19.15■□□□□ 0.66
Nop56Q9D6Z1 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Nop56Q9D6Z1 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nop56Q9D6Z1 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nop56Q9D6Z1 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.66
Nop56Q9D6Z1 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC19.14■□□□□ 0.66
Nop56Q9D6Z1 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Nop56Q9D6Z1 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC19.14■□□□□ 0.65
Nop56Q9D6Z1 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nop56Q9D6Z1 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nop56Q9D6Z1 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Nop56Q9D6Z1 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC19.14■□□□□ 0.65
Nop56Q9D6Z1 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Nop56Q9D6Z1 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Nop56Q9D6Z1 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nop56Q9D6Z1 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nop56Q9D6Z1 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nop56Q9D6Z1 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Nop56Q9D6Z1 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nop56Q9D6Z1 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nop56Q9D6Z1 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nop56Q9D6Z1 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nop56Q9D6Z1 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nop56Q9D6Z1 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Nop56Q9D6Z1 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nop56Q9D6Z1 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nop56Q9D6Z1 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nop56Q9D6Z1 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Nop56Q9D6Z1 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nop56Q9D6Z1 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nop56Q9D6Z1 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Nop56Q9D6Z1 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nop56Q9D6Z1 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nop56Q9D6Z1 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nop56Q9D6Z1 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nop56Q9D6Z1 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nop56Q9D6Z1 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nop56Q9D6Z1 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nop56Q9D6Z1 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nop56Q9D6Z1 Dmtn-207ENSMUST00000228001 2437 ntBASIC19.12■□□□□ 0.65
Nop56Q9D6Z1 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Nop56Q9D6Z1 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Nop56Q9D6Z1 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms