Protein–RNA interactions for Protein: Q9D2N9

Vps33a, Vacuolar protein sorting-associated protein 33A, mousemouse

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps33aQ9D2N9 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vps33aQ9D2N9 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Vps33aQ9D2N9 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vps33aQ9D2N9 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Vps33aQ9D2N9 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vps33aQ9D2N9 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vps33aQ9D2N9 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vps33aQ9D2N9 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC19.72■□□□□ 0.75
Vps33aQ9D2N9 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Vps33aQ9D2N9 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC19.72■□□□□ 0.75
Vps33aQ9D2N9 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Vps33aQ9D2N9 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vps33aQ9D2N9 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vps33aQ9D2N9 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Vps33aQ9D2N9 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vps33aQ9D2N9 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vps33aQ9D2N9 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vps33aQ9D2N9 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vps33aQ9D2N9 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Vps33aQ9D2N9 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Vps33aQ9D2N9 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Vps33aQ9D2N9 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Vps33aQ9D2N9 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Vps33aQ9D2N9 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC19.71■□□□□ 0.75
Vps33aQ9D2N9 Gm43566-201ENSMUST00000196851 808 ntBASIC19.71■□□□□ 0.75
Vps33aQ9D2N9 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Vps33aQ9D2N9 Gm5921-201ENSMUST00000075898 882 ntBASIC19.71■□□□□ 0.75
Vps33aQ9D2N9 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Vps33aQ9D2N9 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Vps33aQ9D2N9 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Vps33aQ9D2N9 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
Vps33aQ9D2N9 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Vps33aQ9D2N9 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Vps33aQ9D2N9 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC19.71■□□□□ 0.75
Vps33aQ9D2N9 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Vps33aQ9D2N9 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
Vps33aQ9D2N9 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Vps33aQ9D2N9 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Vps33aQ9D2N9 Gm42918-201ENSMUST00000199249 1580 ntBASIC19.7■□□□□ 0.74
Vps33aQ9D2N9 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Vps33aQ9D2N9 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Vps33aQ9D2N9 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Vps33aQ9D2N9 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Vps33aQ9D2N9 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Vps33aQ9D2N9 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Vps33aQ9D2N9 Gm6085-201ENSMUST00000182774 1470 ntBASIC19.7■□□□□ 0.74
Vps33aQ9D2N9 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Vps33aQ9D2N9 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Vps33aQ9D2N9 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Vps33aQ9D2N9 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Vps33aQ9D2N9 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Vps33aQ9D2N9 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Vps33aQ9D2N9 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Vps33aQ9D2N9 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Vps33aQ9D2N9 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Vps33aQ9D2N9 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Vps33aQ9D2N9 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Vps33aQ9D2N9 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Vps33aQ9D2N9 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC19.69■□□□□ 0.74
Vps33aQ9D2N9 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Vps33aQ9D2N9 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Vps33aQ9D2N9 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC19.69■□□□□ 0.74
Vps33aQ9D2N9 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Vps33aQ9D2N9 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Vps33aQ9D2N9 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Vps33aQ9D2N9 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Vps33aQ9D2N9 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Vps33aQ9D2N9 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Vps33aQ9D2N9 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Vps33aQ9D2N9 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Vps33aQ9D2N9 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Vps33aQ9D2N9 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Vps33aQ9D2N9 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC19.68■□□□□ 0.74
Vps33aQ9D2N9 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC19.68■□□□□ 0.74
Vps33aQ9D2N9 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
Vps33aQ9D2N9 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Vps33aQ9D2N9 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Vps33aQ9D2N9 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Vps33aQ9D2N9 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Vps33aQ9D2N9 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Vps33aQ9D2N9 Gm28265-201ENSMUST00000188201 2319 ntBASIC19.68■□□□□ 0.74
Vps33aQ9D2N9 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Vps33aQ9D2N9 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Vps33aQ9D2N9 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC19.67■□□□□ 0.74
Vps33aQ9D2N9 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC19.67■□□□□ 0.74
Vps33aQ9D2N9 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC19.67■□□□□ 0.74
Vps33aQ9D2N9 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC19.67■□□□□ 0.74
Vps33aQ9D2N9 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC19.67■□□□□ 0.74
Vps33aQ9D2N9 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Vps33aQ9D2N9 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Vps33aQ9D2N9 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Vps33aQ9D2N9 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Vps33aQ9D2N9 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Vps33aQ9D2N9 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Vps33aQ9D2N9 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Vps33aQ9D2N9 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Vps33aQ9D2N9 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Vps33aQ9D2N9 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Vps33aQ9D2N9 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Vps33aQ9D2N9 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms