Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim42Q9D2H5 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim42Q9D2H5 Gm7417-201ENSMUST00000192950 473 ntBASIC18.57■□□□□ 0.56
Trim42Q9D2H5 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Trim42Q9D2H5 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Trim42Q9D2H5 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Trim42Q9D2H5 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Trim42Q9D2H5 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim42Q9D2H5 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Trim42Q9D2H5 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Trim42Q9D2H5 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trim42Q9D2H5 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trim42Q9D2H5 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trim42Q9D2H5 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC18.56■□□□□ 0.56
Trim42Q9D2H5 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Trim42Q9D2H5 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trim42Q9D2H5 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Trim42Q9D2H5 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trim42Q9D2H5 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trim42Q9D2H5 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Trim42Q9D2H5 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trim42Q9D2H5 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
Trim42Q9D2H5 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim42Q9D2H5 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim42Q9D2H5 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim42Q9D2H5 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
Trim42Q9D2H5 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim42Q9D2H5 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Trim42Q9D2H5 Gm8770-201ENSMUST00000121113 1109 ntBASIC18.55■□□□□ 0.56
Trim42Q9D2H5 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim42Q9D2H5 Gm5812-201ENSMUST00000061073 957 ntBASIC18.55■□□□□ 0.56
Trim42Q9D2H5 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC18.55■□□□□ 0.56
Trim42Q9D2H5 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim42Q9D2H5 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim42Q9D2H5 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim42Q9D2H5 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim42Q9D2H5 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Trim42Q9D2H5 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Trim42Q9D2H5 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC18.54■□□□□ 0.56
Trim42Q9D2H5 Gm42939-201ENSMUST00000197514 2205 ntBASIC18.54■□□□□ 0.56
Trim42Q9D2H5 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim42Q9D2H5 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim42Q9D2H5 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC18.54■□□□□ 0.56
Trim42Q9D2H5 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim42Q9D2H5 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Trim42Q9D2H5 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Trim42Q9D2H5 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC18.54■□□□□ 0.56
Trim42Q9D2H5 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim42Q9D2H5 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim42Q9D2H5 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim42Q9D2H5 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim42Q9D2H5 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim42Q9D2H5 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim42Q9D2H5 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC18.53■□□□□ 0.56
Trim42Q9D2H5 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim42Q9D2H5 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim42Q9D2H5 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Trim42Q9D2H5 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Trim42Q9D2H5 Serp2-204ENSMUST00000228055 705 ntBASIC18.53■□□□□ 0.56
Trim42Q9D2H5 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Trim42Q9D2H5 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim42Q9D2H5 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim42Q9D2H5 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trim42Q9D2H5 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Trim42Q9D2H5 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Trim42Q9D2H5 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trim42Q9D2H5 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC18.52■□□□□ 0.56
Trim42Q9D2H5 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trim42Q9D2H5 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Trim42Q9D2H5 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trim42Q9D2H5 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trim42Q9D2H5 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Trim42Q9D2H5 AC123834.2-201ENSMUST00000224038 2340 ntBASIC18.52■□□□□ 0.56
Trim42Q9D2H5 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Trim42Q9D2H5 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Trim42Q9D2H5 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Trim42Q9D2H5 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC18.52■□□□□ 0.55
Trim42Q9D2H5 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trim42Q9D2H5 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Trim42Q9D2H5 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Trim42Q9D2H5 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC18.51■□□□□ 0.55
Trim42Q9D2H5 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Trim42Q9D2H5 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Trim42Q9D2H5 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Trim42Q9D2H5 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC18.51■□□□□ 0.55
Trim42Q9D2H5 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trim42Q9D2H5 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC18.51■□□□□ 0.55
Trim42Q9D2H5 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trim42Q9D2H5 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC18.51■□□□□ 0.55
Trim42Q9D2H5 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trim42Q9D2H5 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trim42Q9D2H5 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC18.5■□□□□ 0.55
Trim42Q9D2H5 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trim42Q9D2H5 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trim42Q9D2H5 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Trim42Q9D2H5 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Trim42Q9D2H5 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trim42Q9D2H5 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trim42Q9D2H5 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trim42Q9D2H5 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms