Protein–RNA interactions for Protein: Q9CWS1

Rnf135, E3 ubiquitin-protein ligase RNF135, mousemouse

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf135Q9CWS1 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC19.33■□□□□ 0.68
Rnf135Q9CWS1 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC19.33■□□□□ 0.68
Rnf135Q9CWS1 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Rnf135Q9CWS1 Grk6-206ENSMUST00000224995 2971 ntBASIC19.33■□□□□ 0.68
Rnf135Q9CWS1 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC19.33■□□□□ 0.68
Rnf135Q9CWS1 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rnf135Q9CWS1 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC19.32■□□□□ 0.68
Rnf135Q9CWS1 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rnf135Q9CWS1 Rarb-207ENSMUST00000225921 2756 ntBASIC19.32■□□□□ 0.68
Rnf135Q9CWS1 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC19.32■□□□□ 0.68
Rnf135Q9CWS1 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Rnf135Q9CWS1 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC19.32■□□□□ 0.68
Rnf135Q9CWS1 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rnf135Q9CWS1 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rnf135Q9CWS1 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rnf135Q9CWS1 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rnf135Q9CWS1 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Rnf135Q9CWS1 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rnf135Q9CWS1 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rnf135Q9CWS1 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rnf135Q9CWS1 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rnf135Q9CWS1 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
Rnf135Q9CWS1 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC19.31■□□□□ 0.68
Rnf135Q9CWS1 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rnf135Q9CWS1 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rnf135Q9CWS1 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rnf135Q9CWS1 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rnf135Q9CWS1 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rnf135Q9CWS1 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC19.31■□□□□ 0.68
Rnf135Q9CWS1 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rnf135Q9CWS1 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rnf135Q9CWS1 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rnf135Q9CWS1 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Rnf135Q9CWS1 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Rnf135Q9CWS1 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rnf135Q9CWS1 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rnf135Q9CWS1 Gm37179-201ENSMUST00000194862 823 ntBASIC19.3■□□□□ 0.68
Rnf135Q9CWS1 Gm18671-201ENSMUST00000214826 683 ntBASIC19.3■□□□□ 0.68
Rnf135Q9CWS1 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Rnf135Q9CWS1 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rnf135Q9CWS1 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rnf135Q9CWS1 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rnf135Q9CWS1 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Rnf135Q9CWS1 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rnf135Q9CWS1 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rnf135Q9CWS1 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rnf135Q9CWS1 Gm7856-201ENSMUST00000117514 1493 ntBASIC19.29■□□□□ 0.68
Rnf135Q9CWS1 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Rnf135Q9CWS1 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rnf135Q9CWS1 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rnf135Q9CWS1 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rnf135Q9CWS1 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC19.29■□□□□ 0.68
Rnf135Q9CWS1 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rnf135Q9CWS1 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rnf135Q9CWS1 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rnf135Q9CWS1 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rnf135Q9CWS1 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rnf135Q9CWS1 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Rnf135Q9CWS1 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rnf135Q9CWS1 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rnf135Q9CWS1 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rnf135Q9CWS1 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rnf135Q9CWS1 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rnf135Q9CWS1 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Rnf135Q9CWS1 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Rnf135Q9CWS1 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rnf135Q9CWS1 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Rnf135Q9CWS1 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Rnf135Q9CWS1 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rnf135Q9CWS1 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rnf135Q9CWS1 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Rnf135Q9CWS1 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC19.28■□□□□ 0.68
Rnf135Q9CWS1 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rnf135Q9CWS1 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Rnf135Q9CWS1 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rnf135Q9CWS1 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rnf135Q9CWS1 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rnf135Q9CWS1 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Rnf135Q9CWS1 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Rnf135Q9CWS1 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC19.28■□□□□ 0.68
Rnf135Q9CWS1 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC19.28■□□□□ 0.68
Rnf135Q9CWS1 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rnf135Q9CWS1 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rnf135Q9CWS1 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Rnf135Q9CWS1 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rnf135Q9CWS1 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rnf135Q9CWS1 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
Rnf135Q9CWS1 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Rnf135Q9CWS1 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Rnf135Q9CWS1 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Rnf135Q9CWS1 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Rnf135Q9CWS1 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rnf135Q9CWS1 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rnf135Q9CWS1 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Rnf135Q9CWS1 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rnf135Q9CWS1 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Rnf135Q9CWS1 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Rnf135Q9CWS1 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Rnf135Q9CWS1 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Rnf135Q9CWS1 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms