Protein–RNA interactions for Protein: Q9CQQ8

Lsm7, U6 snRNA-associated Sm-like protein LSm7, mousemouse

Known RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm7Q9CQQ8 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Lsm7Q9CQQ8 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Lsm7Q9CQQ8 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Lsm7Q9CQQ8 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Lsm7Q9CQQ8 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Lsm7Q9CQQ8 AC126028.2-201ENSMUST00000228100 1833 ntBASIC18.82■□□□□ 0.6
Lsm7Q9CQQ8 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Lsm7Q9CQQ8 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Lsm7Q9CQQ8 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Lsm7Q9CQQ8 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Lsm7Q9CQQ8 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
Lsm7Q9CQQ8 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC18.82■□□□□ 0.6
Lsm7Q9CQQ8 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Lsm7Q9CQQ8 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Lsm7Q9CQQ8 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Lsm7Q9CQQ8 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Lsm7Q9CQQ8 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Lsm7Q9CQQ8 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Lsm7Q9CQQ8 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Lsm7Q9CQQ8 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC18.81■□□□□ 0.6
Lsm7Q9CQQ8 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Lsm7Q9CQQ8 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Lsm7Q9CQQ8 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Lsm7Q9CQQ8 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC18.81■□□□□ 0.6
Lsm7Q9CQQ8 Gm20760-201ENSMUST00000179197 648 ntBASIC18.81■□□□□ 0.6
Lsm7Q9CQQ8 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC18.81■□□□□ 0.6
Lsm7Q9CQQ8 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC18.81■□□□□ 0.6
Lsm7Q9CQQ8 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC18.81■□□□□ 0.6
Lsm7Q9CQQ8 AC124603.1-201ENSMUST00000223843 308 ntBASIC18.81■□□□□ 0.6
Lsm7Q9CQQ8 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Lsm7Q9CQQ8 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Lsm7Q9CQQ8 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Lsm7Q9CQQ8 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Lsm7Q9CQQ8 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Lsm7Q9CQQ8 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Lsm7Q9CQQ8 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Lsm7Q9CQQ8 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Lsm7Q9CQQ8 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Lsm7Q9CQQ8 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC18.8■□□□□ 0.6
Lsm7Q9CQQ8 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Lsm7Q9CQQ8 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
Lsm7Q9CQQ8 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
Lsm7Q9CQQ8 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC18.8■□□□□ 0.6
Lsm7Q9CQQ8 Gm10653-202ENSMUST00000139570 835 ntBASIC18.8■□□□□ 0.6
Lsm7Q9CQQ8 Gm20049-201ENSMUST00000219950 730 ntBASIC18.8■□□□□ 0.6
Lsm7Q9CQQ8 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Lsm7Q9CQQ8 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Lsm7Q9CQQ8 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Lsm7Q9CQQ8 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Lsm7Q9CQQ8 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Lsm7Q9CQQ8 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC18.8■□□□□ 0.6
Lsm7Q9CQQ8 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Lsm7Q9CQQ8 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Lsm7Q9CQQ8 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Lsm7Q9CQQ8 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Lsm7Q9CQQ8 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Lsm7Q9CQQ8 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lsm7Q9CQQ8 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lsm7Q9CQQ8 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lsm7Q9CQQ8 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Lsm7Q9CQQ8 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC18.79■□□□□ 0.6
Lsm7Q9CQQ8 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Lsm7Q9CQQ8 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Lsm7Q9CQQ8 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lsm7Q9CQQ8 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Lsm7Q9CQQ8 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lsm7Q9CQQ8 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
Lsm7Q9CQQ8 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lsm7Q9CQQ8 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Lsm7Q9CQQ8 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lsm7Q9CQQ8 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Lsm7Q9CQQ8 Gm12527-201ENSMUST00000117967 564 ntBASIC18.78■□□□□ 0.6
Lsm7Q9CQQ8 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lsm7Q9CQQ8 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Lsm7Q9CQQ8 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC18.78■□□□□ 0.6
Lsm7Q9CQQ8 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC18.78■□□□□ 0.6
Lsm7Q9CQQ8 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lsm7Q9CQQ8 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lsm7Q9CQQ8 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lsm7Q9CQQ8 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lsm7Q9CQQ8 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Lsm7Q9CQQ8 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.6
Lsm7Q9CQQ8 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Lsm7Q9CQQ8 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Lsm7Q9CQQ8 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC18.77■□□□□ 0.6
Lsm7Q9CQQ8 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Lsm7Q9CQQ8 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Lsm7Q9CQQ8 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Lsm7Q9CQQ8 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Lsm7Q9CQQ8 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC18.77■□□□□ 0.6
Lsm7Q9CQQ8 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Lsm7Q9CQQ8 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Lsm7Q9CQQ8 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Lsm7Q9CQQ8 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Lsm7Q9CQQ8 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Lsm7Q9CQQ8 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Lsm7Q9CQQ8 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Lsm7Q9CQQ8 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Lsm7Q9CQQ8 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC18.76■□□□□ 0.59
Lsm7Q9CQQ8 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms