Protein–RNA interactions for Protein: Q9CQ71

Rpa3, Replication protein A 14 kDa subunit, mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa3Q9CQ71 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Rpa3Q9CQ71 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC19.63■□□□□ 0.73
Rpa3Q9CQ71 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rpa3Q9CQ71 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
Rpa3Q9CQ71 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Rpa3Q9CQ71 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Rpa3Q9CQ71 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Rpa3Q9CQ71 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rpa3Q9CQ71 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rpa3Q9CQ71 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Rpa3Q9CQ71 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rpa3Q9CQ71 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rpa3Q9CQ71 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rpa3Q9CQ71 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rpa3Q9CQ71 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rpa3Q9CQ71 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC19.62■□□□□ 0.73
Rpa3Q9CQ71 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Rpa3Q9CQ71 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Rpa3Q9CQ71 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rpa3Q9CQ71 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Rpa3Q9CQ71 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Rpa3Q9CQ71 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Rpa3Q9CQ71 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rpa3Q9CQ71 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rpa3Q9CQ71 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rpa3Q9CQ71 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rpa3Q9CQ71 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Rpa3Q9CQ71 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Rpa3Q9CQ71 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Rpa3Q9CQ71 Gm6420-201ENSMUST00000193885 723 ntBASIC19.61■□□□□ 0.73
Rpa3Q9CQ71 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC19.61■□□□□ 0.73
Rpa3Q9CQ71 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rpa3Q9CQ71 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rpa3Q9CQ71 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Rpa3Q9CQ71 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rpa3Q9CQ71 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rpa3Q9CQ71 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC19.6■□□□□ 0.73
Rpa3Q9CQ71 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rpa3Q9CQ71 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Rpa3Q9CQ71 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rpa3Q9CQ71 Gm5784-201ENSMUST00000179344 2478 ntBASIC19.6■□□□□ 0.73
Rpa3Q9CQ71 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rpa3Q9CQ71 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rpa3Q9CQ71 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC19.6■□□□□ 0.73
Rpa3Q9CQ71 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC19.6■□□□□ 0.73
Rpa3Q9CQ71 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rpa3Q9CQ71 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rpa3Q9CQ71 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rpa3Q9CQ71 Rncr4-201ENSMUST00000194541 2234 ntBASIC19.6■□□□□ 0.73
Rpa3Q9CQ71 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rpa3Q9CQ71 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Rpa3Q9CQ71 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Rpa3Q9CQ71 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rpa3Q9CQ71 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rpa3Q9CQ71 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Rpa3Q9CQ71 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rpa3Q9CQ71 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rpa3Q9CQ71 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC19.59■□□□□ 0.73
Rpa3Q9CQ71 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rpa3Q9CQ71 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rpa3Q9CQ71 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rpa3Q9CQ71 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rpa3Q9CQ71 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Rpa3Q9CQ71 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rpa3Q9CQ71 Nespas-201ENSMUST00000143738 1083 ntBASIC19.59■□□□□ 0.73
Rpa3Q9CQ71 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Rpa3Q9CQ71 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Rpa3Q9CQ71 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rpa3Q9CQ71 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Rpa3Q9CQ71 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rpa3Q9CQ71 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rpa3Q9CQ71 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rpa3Q9CQ71 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rpa3Q9CQ71 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Rpa3Q9CQ71 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC19.58■□□□□ 0.73
Rpa3Q9CQ71 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
Rpa3Q9CQ71 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
Rpa3Q9CQ71 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
Rpa3Q9CQ71 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Rpa3Q9CQ71 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC19.58■□□□□ 0.73
Rpa3Q9CQ71 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Rpa3Q9CQ71 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC19.58■□□□□ 0.72
Rpa3Q9CQ71 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC19.58■□□□□ 0.72
Rpa3Q9CQ71 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Rpa3Q9CQ71 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
Rpa3Q9CQ71 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Rpa3Q9CQ71 Golph3-205ENSMUST00000228671 2842 ntBASIC19.57■□□□□ 0.72
Rpa3Q9CQ71 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rpa3Q9CQ71 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Rpa3Q9CQ71 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rpa3Q9CQ71 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC19.57■□□□□ 0.72
Rpa3Q9CQ71 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rpa3Q9CQ71 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rpa3Q9CQ71 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rpa3Q9CQ71 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rpa3Q9CQ71 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rpa3Q9CQ71 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC19.57■□□□□ 0.72
Rpa3Q9CQ71 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rpa3Q9CQ71 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Rpa3Q9CQ71 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms