Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cdh23Q99PF4 Gm7712-202ENSMUST00000222331 1510 ntBASIC19.18■□□□□ 0.66
Cdh23Q99PF4 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Cdh23Q99PF4 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
Cdh23Q99PF4 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Cdh23Q99PF4 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Cdh23Q99PF4 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cdh23Q99PF4 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cdh23Q99PF4 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cdh23Q99PF4 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cdh23Q99PF4 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cdh23Q99PF4 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cdh23Q99PF4 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Cdh23Q99PF4 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Cdh23Q99PF4 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cdh23Q99PF4 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Cdh23Q99PF4 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Cdh23Q99PF4 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Cdh23Q99PF4 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Cdh23Q99PF4 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cdh23Q99PF4 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Cdh23Q99PF4 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cdh23Q99PF4 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Cdh23Q99PF4 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Cdh23Q99PF4 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cdh23Q99PF4 AC107452.1-201ENSMUST00000227963 481 ntBASIC19.17■□□□□ 0.66
Cdh23Q99PF4 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cdh23Q99PF4 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cdh23Q99PF4 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cdh23Q99PF4 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cdh23Q99PF4 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cdh23Q99PF4 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cdh23Q99PF4 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Cdh23Q99PF4 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Cdh23Q99PF4 Gm7284-201ENSMUST00000131667 944 ntBASIC19.16■□□□□ 0.66
Cdh23Q99PF4 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cdh23Q99PF4 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cdh23Q99PF4 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Cdh23Q99PF4 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Cdh23Q99PF4 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cdh23Q99PF4 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
Cdh23Q99PF4 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cdh23Q99PF4 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Cdh23Q99PF4 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Cdh23Q99PF4 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cdh23Q99PF4 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cdh23Q99PF4 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cdh23Q99PF4 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cdh23Q99PF4 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cdh23Q99PF4 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Cdh23Q99PF4 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cdh23Q99PF4 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cdh23Q99PF4 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC19.15■□□□□ 0.66
Cdh23Q99PF4 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cdh23Q99PF4 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cdh23Q99PF4 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC19.14■□□□□ 0.65
Cdh23Q99PF4 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cdh23Q99PF4 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cdh23Q99PF4 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Cdh23Q99PF4 Gm18032-201ENSMUST00000222541 538 ntBASIC19.14■□□□□ 0.65
Cdh23Q99PF4 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cdh23Q99PF4 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Cdh23Q99PF4 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Cdh23Q99PF4 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cdh23Q99PF4 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cdh23Q99PF4 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cdh23Q99PF4 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cdh23Q99PF4 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Cdh23Q99PF4 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Cdh23Q99PF4 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC19.13■□□□□ 0.65
Cdh23Q99PF4 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC19.13■□□□□ 0.65
Cdh23Q99PF4 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Cdh23Q99PF4 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cdh23Q99PF4 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cdh23Q99PF4 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cdh23Q99PF4 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cdh23Q99PF4 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC19.12■□□□□ 0.65
Cdh23Q99PF4 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cdh23Q99PF4 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cdh23Q99PF4 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Cdh23Q99PF4 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cdh23Q99PF4 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC19.12■□□□□ 0.65
Cdh23Q99PF4 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Cdh23Q99PF4 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC19.12■□□□□ 0.65
Cdh23Q99PF4 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Cdh23Q99PF4 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
Cdh23Q99PF4 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cdh23Q99PF4 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cdh23Q99PF4 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Cdh23Q99PF4 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Cdh23Q99PF4 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC19.11■□□□□ 0.65
Cdh23Q99PF4 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cdh23Q99PF4 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cdh23Q99PF4 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cdh23Q99PF4 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cdh23Q99PF4 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cdh23Q99PF4 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Cdh23Q99PF4 Gm14859-201ENSMUST00000117752 357 ntBASIC19.1■□□□□ 0.65
Cdh23Q99PF4 Gm26971-201ENSMUST00000182423 1072 ntBASIC19.1■□□□□ 0.65
Cdh23Q99PF4 Umpk-ps-201ENSMUST00000211897 827 ntBASIC19.1■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms