Protein–RNA interactions for Protein: Q99JR8

Smarcd2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, mousemouse

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd2Q99JR8 Gm29994-201ENSMUST00000195495 1193 ntBASIC18.88■□□□□ 0.61
Smarcd2Q99JR8 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC18.88■□□□□ 0.61
Smarcd2Q99JR8 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smarcd2Q99JR8 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Smarcd2Q99JR8 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smarcd2Q99JR8 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smarcd2Q99JR8 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smarcd2Q99JR8 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smarcd2Q99JR8 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smarcd2Q99JR8 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Smarcd2Q99JR8 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC18.87■□□□□ 0.61
Smarcd2Q99JR8 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smarcd2Q99JR8 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Smarcd2Q99JR8 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC18.87■□□□□ 0.61
Smarcd2Q99JR8 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smarcd2Q99JR8 Gm15565-201ENSMUST00000118890 427 ntBASIC18.87■□□□□ 0.61
Smarcd2Q99JR8 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC18.87■□□□□ 0.61
Smarcd2Q99JR8 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Smarcd2Q99JR8 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Smarcd2Q99JR8 Alkbh1-212ENSMUST00000185301 408 ntBASIC18.87■□□□□ 0.61
Smarcd2Q99JR8 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smarcd2Q99JR8 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smarcd2Q99JR8 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Smarcd2Q99JR8 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smarcd2Q99JR8 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smarcd2Q99JR8 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Smarcd2Q99JR8 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smarcd2Q99JR8 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smarcd2Q99JR8 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smarcd2Q99JR8 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smarcd2Q99JR8 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC18.86■□□□□ 0.61
Smarcd2Q99JR8 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smarcd2Q99JR8 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Smarcd2Q99JR8 Gm9484-201ENSMUST00000195892 1159 ntBASIC18.86■□□□□ 0.61
Smarcd2Q99JR8 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Smarcd2Q99JR8 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smarcd2Q99JR8 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smarcd2Q99JR8 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC18.86■□□□□ 0.61
Smarcd2Q99JR8 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smarcd2Q99JR8 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Smarcd2Q99JR8 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smarcd2Q99JR8 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smarcd2Q99JR8 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smarcd2Q99JR8 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smarcd2Q99JR8 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC18.85■□□□□ 0.61
Smarcd2Q99JR8 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smarcd2Q99JR8 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Smarcd2Q99JR8 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smarcd2Q99JR8 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smarcd2Q99JR8 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smarcd2Q99JR8 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smarcd2Q99JR8 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Smarcd2Q99JR8 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smarcd2Q99JR8 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smarcd2Q99JR8 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smarcd2Q99JR8 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC18.84■□□□□ 0.61
Smarcd2Q99JR8 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Smarcd2Q99JR8 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smarcd2Q99JR8 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Smarcd2Q99JR8 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
Smarcd2Q99JR8 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
Smarcd2Q99JR8 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Smarcd2Q99JR8 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Smarcd2Q99JR8 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smarcd2Q99JR8 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smarcd2Q99JR8 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC18.84■□□□□ 0.61
Smarcd2Q99JR8 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smarcd2Q99JR8 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smarcd2Q99JR8 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Smarcd2Q99JR8 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC18.83■□□□□ 0.61
Smarcd2Q99JR8 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Smarcd2Q99JR8 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC18.83■□□□□ 0.61
Smarcd2Q99JR8 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Smarcd2Q99JR8 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Smarcd2Q99JR8 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Smarcd2Q99JR8 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Smarcd2Q99JR8 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Smarcd2Q99JR8 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Smarcd2Q99JR8 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Smarcd2Q99JR8 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Smarcd2Q99JR8 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Smarcd2Q99JR8 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Smarcd2Q99JR8 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
Smarcd2Q99JR8 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Smarcd2Q99JR8 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Smarcd2Q99JR8 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Smarcd2Q99JR8 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Smarcd2Q99JR8 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smarcd2Q99JR8 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smarcd2Q99JR8 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smarcd2Q99JR8 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smarcd2Q99JR8 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smarcd2Q99JR8 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smarcd2Q99JR8 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC18.81■□□□□ 0.6
Smarcd2Q99JR8 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smarcd2Q99JR8 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Smarcd2Q99JR8 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smarcd2Q99JR8 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Smarcd2Q99JR8 Gm8309-201ENSMUST00000206627 1448 ntBASIC18.81■□□□□ 0.6
Smarcd2Q99JR8 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms