Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Rfc4Q99J62 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Rfc4Q99J62 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Rfc4Q99J62 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Rfc4Q99J62 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Rfc4Q99J62 CT010444.2-201ENSMUST00000217877 1629 ntBASIC21.49■■□□□ 1.03
Rfc4Q99J62 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Rfc4Q99J62 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
Rfc4Q99J62 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
Rfc4Q99J62 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Rfc4Q99J62 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Rfc4Q99J62 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC21.48■■□□□ 1.03
Rfc4Q99J62 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Rfc4Q99J62 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Rfc4Q99J62 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Rfc4Q99J62 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Rfc4Q99J62 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Rfc4Q99J62 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Rfc4Q99J62 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Rfc4Q99J62 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Rfc4Q99J62 Gm9484-201ENSMUST00000195892 1159 ntBASIC21.48■■□□□ 1.03
Rfc4Q99J62 AC163280.1-201ENSMUST00000228194 1100 ntBASIC21.48■■□□□ 1.03
Rfc4Q99J62 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
Rfc4Q99J62 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Rfc4Q99J62 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Rfc4Q99J62 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Rfc4Q99J62 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC21.48■■□□□ 1.03
Rfc4Q99J62 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Rfc4Q99J62 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Rfc4Q99J62 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Rfc4Q99J62 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Rfc4Q99J62 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Rfc4Q99J62 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
Rfc4Q99J62 AC140264.2-202ENSMUST00000218746 817 ntBASIC21.47■■□□□ 1.03
Rfc4Q99J62 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Rfc4Q99J62 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
Rfc4Q99J62 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC21.47■■□□□ 1.03
Rfc4Q99J62 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Rfc4Q99J62 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC21.46■■□□□ 1.03
Rfc4Q99J62 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Rfc4Q99J62 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Rfc4Q99J62 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Rfc4Q99J62 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Rfc4Q99J62 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
Rfc4Q99J62 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Rfc4Q99J62 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
Rfc4Q99J62 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
Rfc4Q99J62 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Rfc4Q99J62 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
Rfc4Q99J62 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
Rfc4Q99J62 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Rfc4Q99J62 Gm10167-201ENSMUST00000150411 1479 ntBASIC21.45■■□□□ 1.03
Rfc4Q99J62 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
Rfc4Q99J62 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Rfc4Q99J62 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Rfc4Q99J62 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC21.45■■□□□ 1.02
Rfc4Q99J62 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
Rfc4Q99J62 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Rfc4Q99J62 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Rfc4Q99J62 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Rfc4Q99J62 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
Rfc4Q99J62 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Rfc4Q99J62 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Rfc4Q99J62 Golph3-202ENSMUST00000226517 2359 ntBASIC21.44■■□□□ 1.02
Rfc4Q99J62 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Rfc4Q99J62 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Rfc4Q99J62 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
Rfc4Q99J62 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
Rfc4Q99J62 Gm11643-201ENSMUST00000119578 864 ntBASIC21.44■■□□□ 1.02
Rfc4Q99J62 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC21.44■■□□□ 1.02
Rfc4Q99J62 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC21.44■■□□□ 1.02
Rfc4Q99J62 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC21.44■■□□□ 1.02
Rfc4Q99J62 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC21.44■■□□□ 1.02
Rfc4Q99J62 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Rfc4Q99J62 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC21.44■■□□□ 1.02
Rfc4Q99J62 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Rfc4Q99J62 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Rfc4Q99J62 Notumos-201ENSMUST00000151998 2659 ntBASIC21.44■■□□□ 1.02
Rfc4Q99J62 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Rfc4Q99J62 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Rfc4Q99J62 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Rfc4Q99J62 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Rfc4Q99J62 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Rfc4Q99J62 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC21.43■■□□□ 1.02
Rfc4Q99J62 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC21.43■■□□□ 1.02
Rfc4Q99J62 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Rfc4Q99J62 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Rfc4Q99J62 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Rfc4Q99J62 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Rfc4Q99J62 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Rfc4Q99J62 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Rfc4Q99J62 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Rfc4Q99J62 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Rfc4Q99J62 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Rfc4Q99J62 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Rfc4Q99J62 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Rfc4Q99J62 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
Rfc4Q99J62 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
Rfc4Q99J62 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Rfc4Q99J62 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms