Protein–RNA interactions for Protein: Q91XX9

Pcdhga9, Protocadherin gamma A9, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga9Q91XX9 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhga9Q91XX9 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhga9Q91XX9 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Pcdhga9Q91XX9 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhga9Q91XX9 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Pcdhga9Q91XX9 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC18.39■□□□□ 0.53
Pcdhga9Q91XX9 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhga9Q91XX9 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Pcdhga9Q91XX9 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Pcdhga9Q91XX9 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Pcdhga9Q91XX9 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Pcdhga9Q91XX9 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC18.38■□□□□ 0.53
Pcdhga9Q91XX9 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC18.38■□□□□ 0.53
Pcdhga9Q91XX9 Gm19094-201ENSMUST00000209791 1246 ntBASIC18.38■□□□□ 0.53
Pcdhga9Q91XX9 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhga9Q91XX9 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhga9Q91XX9 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhga9Q91XX9 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhga9Q91XX9 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhga9Q91XX9 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhga9Q91XX9 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhga9Q91XX9 Gm5784-201ENSMUST00000179344 2478 ntBASIC18.37■□□□□ 0.53
Pcdhga9Q91XX9 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC18.37■□□□□ 0.53
Pcdhga9Q91XX9 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Pcdhga9Q91XX9 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhga9Q91XX9 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhga9Q91XX9 Gm10655-201ENSMUST00000098658 1397 ntBASIC18.37■□□□□ 0.53
Pcdhga9Q91XX9 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhga9Q91XX9 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhga9Q91XX9 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhga9Q91XX9 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhga9Q91XX9 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Pcdhga9Q91XX9 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhga9Q91XX9 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhga9Q91XX9 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhga9Q91XX9 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Pcdhga9Q91XX9 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhga9Q91XX9 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhga9Q91XX9 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhga9Q91XX9 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhga9Q91XX9 Mir5133-201ENSMUST00000174955 77 ntBASIC18.36■□□□□ 0.53
Pcdhga9Q91XX9 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Pcdhga9Q91XX9 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhga9Q91XX9 Rncr4-201ENSMUST00000194541 2234 ntBASIC18.36■□□□□ 0.53
Pcdhga9Q91XX9 Gm42555-201ENSMUST00000199304 1039 ntBASIC18.36■□□□□ 0.53
Pcdhga9Q91XX9 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhga9Q91XX9 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC18.36■□□□□ 0.53
Pcdhga9Q91XX9 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC18.36■□□□□ 0.53
Pcdhga9Q91XX9 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhga9Q91XX9 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhga9Q91XX9 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Pcdhga9Q91XX9 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhga9Q91XX9 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhga9Q91XX9 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhga9Q91XX9 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Pcdhga9Q91XX9 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18.36■□□□□ 0.53
Pcdhga9Q91XX9 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhga9Q91XX9 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhga9Q91XX9 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC18.35■□□□□ 0.53
Pcdhga9Q91XX9 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhga9Q91XX9 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhga9Q91XX9 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC18.35■□□□□ 0.53
Pcdhga9Q91XX9 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhga9Q91XX9 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhga9Q91XX9 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhga9Q91XX9 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhga9Q91XX9 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhga9Q91XX9 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC18.35■□□□□ 0.53
Pcdhga9Q91XX9 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhga9Q91XX9 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Pcdhga9Q91XX9 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Pcdhga9Q91XX9 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhga9Q91XX9 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Pcdhga9Q91XX9 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhga9Q91XX9 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhga9Q91XX9 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhga9Q91XX9 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhga9Q91XX9 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhga9Q91XX9 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhga9Q91XX9 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC18.34■□□□□ 0.53
Pcdhga9Q91XX9 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhga9Q91XX9 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Pcdhga9Q91XX9 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC18.34■□□□□ 0.53
Pcdhga9Q91XX9 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Pcdhga9Q91XX9 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhga9Q91XX9 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Pcdhga9Q91XX9 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
Pcdhga9Q91XX9 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pcdhga9Q91XX9 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
Pcdhga9Q91XX9 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pcdhga9Q91XX9 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
Pcdhga9Q91XX9 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pcdhga9Q91XX9 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pcdhga9Q91XX9 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pcdhga9Q91XX9 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
Pcdhga9Q91XX9 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC18.33■□□□□ 0.53
Pcdhga9Q91XX9 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pcdhga9Q91XX9 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pcdhga9Q91XX9 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pcdhga9Q91XX9 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms