Protein–RNA interactions for Protein: Q91XX6

Pcdhgb4, Protocadherin gamma B4, mousemouse

Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb4Q91XX6 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhgb4Q91XX6 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhgb4Q91XX6 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhgb4Q91XX6 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC19.67■□□□□ 0.74
Pcdhgb4Q91XX6 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhgb4Q91XX6 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Pcdhgb4Q91XX6 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhgb4Q91XX6 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Pcdhgb4Q91XX6 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhgb4Q91XX6 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhgb4Q91XX6 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhgb4Q91XX6 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC19.66■□□□□ 0.74
Pcdhgb4Q91XX6 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
Pcdhgb4Q91XX6 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhgb4Q91XX6 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhgb4Q91XX6 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhgb4Q91XX6 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC19.66■□□□□ 0.74
Pcdhgb4Q91XX6 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhgb4Q91XX6 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhgb4Q91XX6 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhgb4Q91XX6 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdhgb4Q91XX6 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdhgb4Q91XX6 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdhgb4Q91XX6 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdhgb4Q91XX6 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Pcdhgb4Q91XX6 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdhgb4Q91XX6 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdhgb4Q91XX6 Gm10167-201ENSMUST00000150411 1479 ntBASIC19.65■□□□□ 0.74
Pcdhgb4Q91XX6 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdhgb4Q91XX6 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC19.65■□□□□ 0.74
Pcdhgb4Q91XX6 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdhgb4Q91XX6 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdhgb4Q91XX6 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
Pcdhgb4Q91XX6 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
Pcdhgb4Q91XX6 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Pcdhgb4Q91XX6 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdhgb4Q91XX6 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC19.64■□□□□ 0.73
Pcdhgb4Q91XX6 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdhgb4Q91XX6 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC19.64■□□□□ 0.73
Pcdhgb4Q91XX6 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdhgb4Q91XX6 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdhgb4Q91XX6 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Pcdhgb4Q91XX6 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdhgb4Q91XX6 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Pcdhgb4Q91XX6 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Pcdhgb4Q91XX6 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdhgb4Q91XX6 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdhgb4Q91XX6 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdhgb4Q91XX6 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdhgb4Q91XX6 Gm42922-201ENSMUST00000195887 2078 ntBASIC19.63■□□□□ 0.73
Pcdhgb4Q91XX6 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Pcdhgb4Q91XX6 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdhgb4Q91XX6 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdhgb4Q91XX6 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdhgb4Q91XX6 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdhgb4Q91XX6 Gm10129-202ENSMUST00000193100 1316 ntBASIC19.63■□□□□ 0.73
Pcdhgb4Q91XX6 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC19.63■□□□□ 0.73
Pcdhgb4Q91XX6 Gm29179-208ENSMUST00000190450 1137 ntTSL 5 BASIC19.63■□□□□ 0.73
Pcdhgb4Q91XX6 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC19.63■□□□□ 0.73
Pcdhgb4Q91XX6 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC19.63■□□□□ 0.73
Pcdhgb4Q91XX6 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdhgb4Q91XX6 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdhgb4Q91XX6 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdhgb4Q91XX6 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdhgb4Q91XX6 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC19.63■□□□□ 0.73
Pcdhgb4Q91XX6 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdhgb4Q91XX6 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhgb4Q91XX6 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Pcdhgb4Q91XX6 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC19.62■□□□□ 0.73
Pcdhgb4Q91XX6 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhgb4Q91XX6 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhgb4Q91XX6 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhgb4Q91XX6 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhgb4Q91XX6 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhgb4Q91XX6 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhgb4Q91XX6 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC19.62■□□□□ 0.73
Pcdhgb4Q91XX6 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC19.62■□□□□ 0.73
Pcdhgb4Q91XX6 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhgb4Q91XX6 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Pcdhgb4Q91XX6 Gm26787-201ENSMUST00000180474 608 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhgb4Q91XX6 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhgb4Q91XX6 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Pcdhgb4Q91XX6 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhgb4Q91XX6 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhgb4Q91XX6 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhgb4Q91XX6 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhgb4Q91XX6 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC19.62■□□□□ 0.73
Pcdhgb4Q91XX6 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhgb4Q91XX6 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhgb4Q91XX6 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdhgb4Q91XX6 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdhgb4Q91XX6 Dapk1-207ENSMUST00000226059 5009 ntBASIC19.61■□□□□ 0.73
Pcdhgb4Q91XX6 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdhgb4Q91XX6 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC19.61■□□□□ 0.73
Pcdhgb4Q91XX6 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Pcdhgb4Q91XX6 Gm13146-201ENSMUST00000118508 780 ntBASIC19.61■□□□□ 0.73
Pcdhgb4Q91XX6 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC19.61■□□□□ 0.73
Pcdhgb4Q91XX6 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdhgb4Q91XX6 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdhgb4Q91XX6 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms