Protein–RNA interactions for Protein: Q91V04

Tram1, Translocating chain-associated membrane protein 1, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tram1Q91V04 Gm19439-201ENSMUST00000198195 2273 ntBASIC16.02■□□□□ 0.16
Tram1Q91V04 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Tram1Q91V04 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Tram1Q91V04 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
Tram1Q91V04 Krt8-ps-201ENSMUST00000208495 945 ntBASIC16.02■□□□□ 0.16
Tram1Q91V04 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC16.02■□□□□ 0.16
Tram1Q91V04 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Tram1Q91V04 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Tram1Q91V04 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Tram1Q91V04 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Tram1Q91V04 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Tram1Q91V04 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC16.01■□□□□ 0.15
Tram1Q91V04 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Tram1Q91V04 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Tram1Q91V04 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Tram1Q91V04 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Tram1Q91V04 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Tram1Q91V04 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Tram1Q91V04 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Tram1Q91V04 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Tram1Q91V04 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC16.01■□□□□ 0.15
Tram1Q91V04 Serp2-204ENSMUST00000228055 705 ntBASIC16.01■□□□□ 0.15
Tram1Q91V04 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Tram1Q91V04 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Tram1Q91V04 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Tram1Q91V04 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Tram1Q91V04 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Tram1Q91V04 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC16■□□□□ 0.15
Tram1Q91V04 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Tram1Q91V04 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Tram1Q91V04 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Tram1Q91V04 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Tram1Q91V04 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC16■□□□□ 0.15
Tram1Q91V04 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC16■□□□□ 0.15
Tram1Q91V04 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC16■□□□□ 0.15
Tram1Q91V04 Gm18755-201ENSMUST00000218030 1099 ntBASIC16■□□□□ 0.15
Tram1Q91V04 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Tram1Q91V04 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Tram1Q91V04 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Tram1Q91V04 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Tram1Q91V04 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Tram1Q91V04 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Tram1Q91V04 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Tram1Q91V04 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Tram1Q91V04 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC16■□□□□ 0.15
Tram1Q91V04 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Tram1Q91V04 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Tram1Q91V04 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Tram1Q91V04 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC15.99■□□□□ 0.15
Tram1Q91V04 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Tram1Q91V04 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Tram1Q91V04 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC15.99■□□□□ 0.15
Tram1Q91V04 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC15.99■□□□□ 0.15
Tram1Q91V04 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Tram1Q91V04 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Tram1Q91V04 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Tram1Q91V04 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
Tram1Q91V04 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Tram1Q91V04 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Tram1Q91V04 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC15.98■□□□□ 0.15
Tram1Q91V04 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Tram1Q91V04 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Tram1Q91V04 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Tram1Q91V04 Gm8770-201ENSMUST00000121113 1109 ntBASIC15.98■□□□□ 0.15
Tram1Q91V04 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC15.98■□□□□ 0.15
Tram1Q91V04 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Tram1Q91V04 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Tram1Q91V04 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC15.98■□□□□ 0.15
Tram1Q91V04 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Tram1Q91V04 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Tram1Q91V04 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC15.97■□□□□ 0.15
Tram1Q91V04 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Tram1Q91V04 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Tram1Q91V04 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Tram1Q91V04 Gm43702-201ENSMUST00000198772 2546 ntBASIC15.97■□□□□ 0.15
Tram1Q91V04 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Tram1Q91V04 Gm45906-201ENSMUST00000208911 1430 ntBASIC15.97■□□□□ 0.15
Tram1Q91V04 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Tram1Q91V04 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC15.97■□□□□ 0.15
Tram1Q91V04 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Tram1Q91V04 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Tram1Q91V04 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Tram1Q91V04 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Tram1Q91V04 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Tram1Q91V04 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
Tram1Q91V04 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Tram1Q91V04 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Tram1Q91V04 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Tram1Q91V04 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Tram1Q91V04 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Tram1Q91V04 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC15.96■□□□□ 0.15
Tram1Q91V04 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Tram1Q91V04 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Tram1Q91V04 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Tram1Q91V04 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Tram1Q91V04 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.14
Tram1Q91V04 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC15.96■□□□□ 0.14
Tram1Q91V04 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Tram1Q91V04 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Tram1Q91V04 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms